BLASTX nr result

ID: Cnidium21_contig00021282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021282
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated...   370   e-100
ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2...   365   7e-99
ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|2...   359   5e-97
ref|XP_004148880.1| PREDICTED: U3 small nucleolar RNA-associated...   353   5e-95
emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]   352   8e-95

>ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
            [Vitis vinifera]
          Length = 528

 Score =  370 bits (951), Expect = e-100
 Identities = 186/255 (72%), Positives = 220/255 (86%), Gaps = 3/255 (1%)
 Frame = -2

Query: 1002 ESGEETQEYRILSVGLDGYMKVFDYAKLKVTHSMRYPAALMSVAFSPDCSTRVIGASNGV 823
            + GE +++YR+LSVGLDGYMKVFDY+K K+THSMR+PA L+S+ FSPDC+TR IG SNGV
Sbjct: 273  DGGEGSEQYRVLSVGLDGYMKVFDYSKFKITHSMRFPAPLLSIGFSPDCATRAIGTSNGV 332

Query: 822  LYAGKRKVKKDVGA---EMGKVEGVEVHRKRELRPARVRYFYRGQTAKPTEGDYLVMAPK 652
            +YAGKRKVK +V +   E   +  +E  ++R LRP+  RYF+R Q  KP+EGDYL+  PK
Sbjct: 333  IYAGKRKVKGEVESGLREFPSLGLMEEPQRRVLRPSYFRYFHRSQGEKPSEGDYLITRPK 392

Query: 651  RVKLAEHDKLLKKFRHKEALVSALSGKNPGNVVAVMEELVARRKLLKCVSNLETEELGLL 472
            +VK+AEHDKLLKKFRHK+A VSALSGKNP NVVAVMEELVAR+KLLKCVSNL+TEELGLL
Sbjct: 393  KVKIAEHDKLLKKFRHKDAFVSALSGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLL 452

Query: 471  LQFLQRNSTVPRYAGLLMGLSKKVVEMRAEDVRASDELKGHIRNLKRSVEEEIRCQQSML 292
            L FL R+STVPRYAGLLMGL+KKVV+MRAED+ ASD LKGHIRNLKRSVEEE+R QQS+ 
Sbjct: 453  LAFLHRHSTVPRYAGLLMGLTKKVVQMRAEDIIASDVLKGHIRNLKRSVEEEVRIQQSLQ 512

Query: 291  EIQGIISPLLRMAGR 247
            EIQGIISPLLR+AGR
Sbjct: 513  EIQGIISPLLRIAGR 527


>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
            predicted protein [Populus trichocarpa]
          Length = 534

 Score =  365 bits (938), Expect = 7e-99
 Identities = 185/256 (72%), Positives = 216/256 (84%), Gaps = 4/256 (1%)
 Frame = -2

Query: 1002 ESGEETQEYRILSVGLDGYMKVFDYAKLKVTHSMRYPAALMSVAFSPDCSTRVIGASNGV 823
            ESGEE  +YRILSV LDGYMKVFDYAK+KVTHSMR+PA LMS+ FSPDC TRVIG+SNG+
Sbjct: 278  ESGEEALQYRILSVALDGYMKVFDYAKMKVTHSMRFPAPLMSIGFSPDCMTRVIGSSNGI 337

Query: 822  LYAGKRKVKKDVGAEMG----KVEGVEVHRKRELRPARVRYFYRGQTAKPTEGDYLVMAP 655
            ++AG+RK K+DVG         +  VE  ++R LRP   RYF+R Q  KP EGD+L+M P
Sbjct: 338  IFAGRRKGKEDVGESKSGNFWALGSVEEPQRRALRPTYFRYFHRSQGEKPNEGDHLIMRP 397

Query: 654  KRVKLAEHDKLLKKFRHKEALVSALSGKNPGNVVAVMEELVARRKLLKCVSNLETEELGL 475
            K+VKL+EHDKLLKKFRHKEALVS LSGKNP NVVAVMEE+VARRKLLKCV NL+ EELGL
Sbjct: 398  KKVKLSEHDKLLKKFRHKEALVSVLSGKNPENVVAVMEEMVARRKLLKCVVNLDEEELGL 457

Query: 474  LLQFLQRNSTVPRYAGLLMGLSKKVVEMRAEDVRASDELKGHIRNLKRSVEEEIRCQQSM 295
            LL FL ++ST+PR++GLLMGL+KKV+EMRA+D+RASD LK HIRNLKRSVEEEIR Q S+
Sbjct: 458  LLGFLHKHSTMPRHSGLLMGLTKKVLEMRADDIRASDALKSHIRNLKRSVEEEIRIQHSL 517

Query: 294  LEIQGIISPLLRMAGR 247
             EIQGIISPLLR+AGR
Sbjct: 518  QEIQGIISPLLRIAGR 533


>ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|222861816|gb|EEE99358.1|
            predicted protein [Populus trichocarpa]
          Length = 534

 Score =  359 bits (922), Expect = 5e-97
 Identities = 183/256 (71%), Positives = 216/256 (84%), Gaps = 4/256 (1%)
 Frame = -2

Query: 1002 ESGEETQEYRILSVGLDGYMKVFDYAKLKVTHSMRYPAALMSVAFSPDCSTRVIGASNGV 823
            ESGEE  +YRI SV LDGYMKVFDYAK+KVTHSMR+PA LMS+ FSPDC TRVIG+SNG+
Sbjct: 278  ESGEEALQYRIFSVALDGYMKVFDYAKMKVTHSMRFPAPLMSIGFSPDCMTRVIGSSNGI 337

Query: 822  LYAGKRKVKKDVG-AEMGK---VEGVEVHRKRELRPARVRYFYRGQTAKPTEGDYLVMAP 655
            ++AG+RK K+DVG +++G    +  VE  ++R LRP   RYF+R Q  KP EGD+L+M  
Sbjct: 338  IFAGRRKAKEDVGESKVGNFWALGSVEEPQRRALRPTYFRYFHRSQGEKPNEGDHLIMRQ 397

Query: 654  KRVKLAEHDKLLKKFRHKEALVSALSGKNPGNVVAVMEELVARRKLLKCVSNLETEELGL 475
            K+VKLAEHDKLLKKFRHKEALVS L GKN  NVVAVMEELVARRKLLKCV NL+ EELGL
Sbjct: 398  KKVKLAEHDKLLKKFRHKEALVSVLGGKNTENVVAVMEELVARRKLLKCVVNLDDEELGL 457

Query: 474  LLQFLQRNSTVPRYAGLLMGLSKKVVEMRAEDVRASDELKGHIRNLKRSVEEEIRCQQSM 295
            LL FL ++ST+PR++GLL GL++KV+EMRAED+RASD LKGHIRNLKRSVEEEIR Q S+
Sbjct: 458  LLGFLHKHSTMPRHSGLLTGLTRKVLEMRAEDIRASDALKGHIRNLKRSVEEEIRIQHSL 517

Query: 294  LEIQGIISPLLRMAGR 247
             EIQG+ISPLLR+AGR
Sbjct: 518  QEIQGVISPLLRIAGR 533


>ref|XP_004148880.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
            [Cucumis sativus] gi|449528790|ref|XP_004171386.1|
            PREDICTED: U3 small nucleolar RNA-associated protein 15
            homolog [Cucumis sativus]
          Length = 528

 Score =  353 bits (905), Expect = 5e-95
 Identities = 178/255 (69%), Positives = 212/255 (83%), Gaps = 3/255 (1%)
 Frame = -2

Query: 1002 ESGEETQEYRILSVGLDGYMKVFDYAKLKVTHSMRYPAALMSVAFSPDCSTRVIGASNGV 823
            +SGEE+ ++RILSV LDGYMKVFDY+K+KVTHSMR+P  LMSV FSPDCSTRV+G SNG+
Sbjct: 274  DSGEESDQFRILSVALDGYMKVFDYSKMKVTHSMRFPTPLMSVGFSPDCSTRVVGTSNGI 333

Query: 822  LYAGKRKVKKDVGAEMGK---VEGVEVHRKRELRPARVRYFYRGQTAKPTEGDYLVMAPK 652
            LYAGKRK K+     +     +  V   ++R LRP+  RYF+RGQ  KP+EGDYLVM PK
Sbjct: 334  LYAGKRKTKESETTNLSNPWSLGTVGEPQRRVLRPSHFRYFHRGQGEKPSEGDYLVMKPK 393

Query: 651  RVKLAEHDKLLKKFRHKEALVSALSGKNPGNVVAVMEELVARRKLLKCVSNLETEELGLL 472
            +VKL EHD LLKKFRHK+ALVS L+ +NP NVVAVMEELVAR+KLLKCV+NL+ EELG L
Sbjct: 394  KVKLTEHDNLLKKFRHKDALVSVLASRNPENVVAVMEELVARKKLLKCVTNLDREELGSL 453

Query: 471  LQFLQRNSTVPRYAGLLMGLSKKVVEMRAEDVRASDELKGHIRNLKRSVEEEIRCQQSML 292
            L FLQ+ ST+PRY+ LLMGL++KVVE+R+EDVRA   LK H+RNLKRSVEEEIR QQS+L
Sbjct: 454  LGFLQKYSTLPRYSNLLMGLTRKVVELRSEDVRAYGALKDHVRNLKRSVEEEIRIQQSLL 513

Query: 291  EIQGIISPLLRMAGR 247
            EIQGIISPLLR+AGR
Sbjct: 514  EIQGIISPLLRIAGR 528


>emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]
          Length = 570

 Score =  352 bits (903), Expect = 8e-95
 Identities = 176/244 (72%), Positives = 209/244 (85%), Gaps = 3/244 (1%)
 Frame = -2

Query: 1002 ESGEETQEYRILSVGLDGYMKVFDYAKLKVTHSMRYPAALMSVAFSPDCSTRVIGASNGV 823
            + GE +++YR+LSVGLDGYMKVFDY+K K+THSMR+PA L+S+ FSPDC+TR IG SNGV
Sbjct: 273  DGGEGSEQYRVLSVGLDGYMKVFDYSKFKITHSMRFPAPLLSIGFSPDCATRAIGTSNGV 332

Query: 822  LYAGKRKVKKDVGA---EMGKVEGVEVHRKRELRPARVRYFYRGQTAKPTEGDYLVMAPK 652
            +YAGKRKVK +V +   E   +  +E  ++R LRP+  RYF+R Q  KP+EGDYL+  PK
Sbjct: 333  IYAGKRKVKGEVESGLREFPSLGLMEEPQRRVLRPSYFRYFHRSQGEKPSEGDYLITRPK 392

Query: 651  RVKLAEHDKLLKKFRHKEALVSALSGKNPGNVVAVMEELVARRKLLKCVSNLETEELGLL 472
            +VK+AEHDKLLKKFRHK+A VSALSGKNP NVVAVMEELVAR+KLLKCVSNL+TEELGLL
Sbjct: 393  KVKIAEHDKLLKKFRHKDAFVSALSGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLL 452

Query: 471  LQFLQRNSTVPRYAGLLMGLSKKVVEMRAEDVRASDELKGHIRNLKRSVEEEIRCQQSML 292
            L FL R+STVPRYAGLLMGL+KKVV+MRAED+ ASD LKGHIRNLKRSVEEE+R QQS+ 
Sbjct: 453  LAFLHRHSTVPRYAGLLMGLTKKVVQMRAEDIIASDVLKGHIRNLKRSVEEEVRIQQSLQ 512

Query: 291  EIQG 280
            EIQG
Sbjct: 513  EIQG 516


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