BLASTX nr result

ID: Cnidium21_contig00021235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021235
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    89   4e-16
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    87   1e-15
gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus v...    86   4e-15
ref|XP_003621937.1| hypothetical protein MTR_7g025220 [Medicago ...    84   2e-14
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...    84   2e-14

>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = +1

Query: 67   TWIIDSGASDHM-CAHQSLFSSLQPLSNLITVSLPNGDTVDISFTGTVPLSNNIILQDVL 243
            +WI+DSGA+DH+ C+  +L S  +   N ITV LPNG  V  + +GTV LS+NI L DVL
Sbjct: 742  SWILDSGATDHVTCSLHNLHSHKR--INPITVKLPNGQYVHATHSGTVQLSSNITLHDVL 799

Query: 244  YVPLFKFNLLSAHKIAKQLNCTISFSHDTCFLQ 342
            Y+P F FNL+S  K+   +NC + FS  +C LQ
Sbjct: 800  YIPSFTFNLISISKLVSSINCELIFSSTSCVLQ 832


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/87 (51%), Positives = 59/87 (67%)
 Frame = +1

Query: 82  SGASDHMCAHQSLFSSLQPLSNLITVSLPNGDTVDISFTGTVPLSNNIILQDVLYVPLFK 261
           +GA+DH+ +H SLF+ L+P SN+ TV+LPNG    I+ TGTV   + + L+DVL VP F 
Sbjct: 646 AGATDHIVSHMSLFTDLKP-SNVTTVNLPNGVASPITHTGTVIFDSQLTLKDVLCVPSFN 704

Query: 262 FNLLSAHKIAKQLNCTISFSHDTCFLQ 342
            NL+SA K+AK  NC I F  D C LQ
Sbjct: 705 LNLISASKLAKDQNCYIIFFPDYCILQ 731


>gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus vulgaris]
          Length = 1009

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/94 (42%), Positives = 63/94 (67%)
 Frame = +1

Query: 70  WIIDSGASDHMCAHQSLFSSLQPLSNLITVSLPNGDTVDISFTGTVPLSNNIILQDVLYV 249
           WI+DSGA+DH+C+  S F+S + +   I++SLPNG  V   ++GTV  ++   L DVLYV
Sbjct: 622 WILDSGATDHVCSSLSEFTSYKSIKP-ISISLPNGHHVFAKYSGTVIFNHKFYLIDVLYV 680

Query: 250 PLFKFNLLSAHKIAKQLNCTISFSHDTCFLQTSS 351
           P   FNL+S  K++  +NC++ FS + C +Q ++
Sbjct: 681 PQLSFNLVSTSKLSLNMNCSLIFSSNNCMIQDNT 714


>ref|XP_003621937.1| hypothetical protein MTR_7g025220 [Medicago truncatula]
           gi|355496952|gb|AES78155.1| hypothetical protein
           MTR_7g025220 [Medicago truncatula]
          Length = 455

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/91 (41%), Positives = 56/91 (61%)
 Frame = +1

Query: 70  WIIDSGASDHMCAHQSLFSSLQPLSNLITVSLPNGDTVDISFTGTVPLSNNIILQDVLYV 249
           WIIDSGA+DH+C+    FSS   +     VSLPNG  V + + G V  S  + +  VLY 
Sbjct: 247 WIIDSGANDHICSSMHYFSSFYKIKPT-RVSLPNGHIVMVEYAGNVTFSPTLYISHVLYS 305

Query: 250 PLFKFNLLSAHKIAKQLNCTISFSHDTCFLQ 342
           P+F+ N++S  K+ + L+C + FS+ TC +Q
Sbjct: 306 PMFQINVISVSKLCESLSCYVKFSNSTCMIQ 336


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
           gi|7267797|emb|CAB81200.1| putative retrotransposon
           polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/91 (46%), Positives = 62/91 (68%)
 Frame = +1

Query: 70  WIIDSGASDHMCAHQSLFSSLQPLSNLITVSLPNGDTVDISFTGTVPLSNNIILQDVLYV 249
           WIIDSGAS H+C+  ++F  L  +S  +TV+LPNG  V I+ TGT+ +++ +IL +VL V
Sbjct: 99  WIIDSGASSHVCSDLTMFRELIHVSG-VTVTLPNGTRVAITHTGTICITSTLILHNVLLV 157

Query: 250 PLFKFNLLSAHKIAKQLNCTISFSHDTCFLQ 342
           P FKFNL+S   + K L+ +  F  D C++Q
Sbjct: 158 PDFKFNLISVCCLVKTLSYSAHFFADCCYIQ 188


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