BLASTX nr result

ID: Cnidium21_contig00021180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021180
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298908.1| global transcription factor group [Populus t...    62   5e-08
emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Ni...    59   4e-07
ref|NP_201366.3| global transcription factor group E7 [Arabidops...    59   4e-07
dbj|BAA98182.1| unnamed protein product [Arabidopsis thaliana]         59   4e-07
ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [V...    59   7e-07

>ref|XP_002298908.1| global transcription factor group [Populus trichocarpa]
           gi|222846166|gb|EEE83713.1| global transcription factor
           group [Populus trichocarpa]
          Length = 411

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = +1

Query: 130 KQAAKKCVLEKQRT--VPEVKENLRTRGNMSDWERDQLGLALEDLAGEYLDEILQIVAKR 303
           K  A K V  + RT  + + K+N   RG M+  E+ +L + L+ L  E L+ ++QI+ KR
Sbjct: 224 KMKAAKTVANQGRTSVLNKPKKNETVRGVMTYEEKQKLSIHLQSLPSEKLESVVQIIRKR 283

Query: 304 NPTMITPDGDGEVELDFCALDNETMWDLHRFV 399
           NP +     + E+E+D  + DNET+W+LH +V
Sbjct: 284 NPGLF--QQEDEIEVDIDSFDNETLWELHGYV 313


>emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana
           benthamiana]
          Length = 613

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 37/88 (42%), Positives = 54/88 (61%)
 Frame = +1

Query: 136 AAKKCVLEKQRTVPEVKENLRTRGNMSDWERDQLGLALEDLAGEYLDEILQIVAKRNPTM 315
           AAK   +EKQ   P+ +     +  MS  E+ +LG+ L+ L  E + +++QI+ KRN  +
Sbjct: 396 AAKVPPMEKQ---PKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHL 452

Query: 316 ITPDGDGEVELDFCALDNETMWDLHRFV 399
              DGD E+ELD  ALD ET+W+L RFV
Sbjct: 453 -AQDGD-EIELDIEALDTETLWELDRFV 478


>ref|NP_201366.3| global transcription factor group E7 [Arabidopsis thaliana]
           gi|75146221|sp|Q7Y214.1|GTE7_ARATH RecName:
           Full=Transcription factor GTE7; AltName:
           Full=Bromodomain-containing protein GTE7; AltName:
           Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E7
           gi|30793995|gb|AAP40447.1| unknown protein [Arabidopsis
           thaliana] gi|110742049|dbj|BAE98957.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|133778882|gb|ABO38781.1| At5g65630 [Arabidopsis
           thaliana] gi|332010696|gb|AED98079.1| global
           transcription factor group E7 [Arabidopsis thaliana]
          Length = 590

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 34/76 (44%), Positives = 50/76 (65%)
 Frame = +1

Query: 172 VPEVKENLRTRGNMSDWERDQLGLALEDLAGEYLDEILQIVAKRNPTMITPDGDGEVELD 351
           +P+ K     +  M+  E+ +LG+ L+DL  E L ++LQI+ KRN  +   DGD E+ELD
Sbjct: 391 LPKPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHL-AQDGD-EIELD 448

Query: 352 FCALDNETMWDLHRFV 399
             A+DNET+W+L RFV
Sbjct: 449 IEAVDNETLWELDRFV 464


>dbj|BAA98182.1| unnamed protein product [Arabidopsis thaliana]
          Length = 643

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 34/76 (44%), Positives = 50/76 (65%)
 Frame = +1

Query: 172 VPEVKENLRTRGNMSDWERDQLGLALEDLAGEYLDEILQIVAKRNPTMITPDGDGEVELD 351
           +P+ K     +  M+  E+ +LG+ L+DL  E L ++LQI+ KRN  +   DGD E+ELD
Sbjct: 446 LPKPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHL-AQDGD-EIELD 503

Query: 352 FCALDNETMWDLHRFV 399
             A+DNET+W+L RFV
Sbjct: 504 IEAVDNETLWELDRFV 519


>ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [Vitis vinifera]
          Length = 561

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 32/75 (42%), Positives = 49/75 (65%)
 Frame = +1

Query: 175 PEVKENLRTRGNMSDWERDQLGLALEDLAGEYLDEILQIVAKRNPTMITPDGDGEVELDF 354
           P+ K     +  MS  E+ +LGL L+ L  E +D+++QI++K+N   +T DGD E+ELD 
Sbjct: 377 PKPKAKDPNKREMSLEEKHKLGLGLQSLPQEKMDQVVQIISKKN-GHLTQDGD-EIELDI 434

Query: 355 CALDNETMWDLHRFV 399
            A+D ET+W+L R V
Sbjct: 435 EAVDTETLWELDRLV 449


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