BLASTX nr result

ID: Cnidium21_contig00021174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021174
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190205.1| ABC transporter I family member 20 [Arabidop...    99   6e-19
ref|XP_002873045.1| non-intrinsic abc protein 9 [Arabidopsis lyr...    99   6e-19
ref|NP_195847.1| ABC transporter I family member 20 [Arabidopsis...    99   6e-19
gb|ADE77121.1| unknown [Picea sitchensis]                              96   3e-18
ref|XP_004139526.1| PREDICTED: ABC transporter I family member 2...    96   4e-18

>ref|NP_001190205.1| ABC transporter I family member 20 [Arabidopsis thaliana]
           gi|332003070|gb|AED90453.1| ABC transporter I family
           member 20 [Arabidopsis thaliana]
          Length = 354

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 50/87 (57%), Positives = 63/87 (72%)
 Frame = -2

Query: 531 IPSSEDKATPTVVIYNLWFTYPGINGHPPPGSKPLIQDFSLTLNPADHVLLVGANDAGKT 352
           +   E K   TV I  L FTYPGI+GHPPPGSKPLI+DFS+TLN +D  LLVG+N AGKT
Sbjct: 3   VTEEEKKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKT 62

Query: 351 TILKILGGNTIDCQKRHIPKLLSQRAW 271
           TILKILGG  +   + H+ ++L + A+
Sbjct: 63  TILKILGGKHM--VEPHMVRVLGRSAF 87


>ref|XP_002873045.1| non-intrinsic abc protein 9 [Arabidopsis lyrata subsp. lyrata]
           gi|297318882|gb|EFH49304.1| non-intrinsic abc protein 9
           [Arabidopsis lyrata subsp. lyrata]
          Length = 328

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 50/87 (57%), Positives = 63/87 (72%)
 Frame = -2

Query: 531 IPSSEDKATPTVVIYNLWFTYPGINGHPPPGSKPLIQDFSLTLNPADHVLLVGANDAGKT 352
           +   E K   TV I  L FTYPGI+GHPPPGSKPLI+DFS+TLN +D  LLVG+N AGKT
Sbjct: 3   VTEEEKKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKT 62

Query: 351 TILKILGGNTIDCQKRHIPKLLSQRAW 271
           TILKILGG  +   + H+ ++L + A+
Sbjct: 63  TILKILGGKHM--VEPHMVRVLGRSAF 87


>ref|NP_195847.1| ABC transporter I family member 20 [Arabidopsis thaliana]
           gi|75335697|sp|Q9LZ98.1|AB20I_ARATH RecName: Full=ABC
           transporter I family member 20; Short=ABC transporter
           ABCI.20; Short=AtABCI20; AltName: Full=GCN-related
           protein 3; AltName: Full=Non-intrinsic ABC protein 9
           gi|13899119|gb|AAK48981.1|AF370554_1 ABC
           transporter-like protein [Arabidopsis thaliana]
           gi|7406423|emb|CAB85532.1| ABC transporter-like protein
           [Arabidopsis thaliana] gi|21554262|gb|AAM63337.1| ABC
           transporter-like protein [Arabidopsis thaliana]
           gi|30984550|gb|AAP42738.1| At5g02270 [Arabidopsis
           thaliana] gi|332003069|gb|AED90452.1| ABC transporter I
           family member 20 [Arabidopsis thaliana]
          Length = 328

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 50/87 (57%), Positives = 63/87 (72%)
 Frame = -2

Query: 531 IPSSEDKATPTVVIYNLWFTYPGINGHPPPGSKPLIQDFSLTLNPADHVLLVGANDAGKT 352
           +   E K   TV I  L FTYPGI+GHPPPGSKPLI+DFS+TLN +D  LLVG+N AGKT
Sbjct: 3   VTEEEKKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKT 62

Query: 351 TILKILGGNTIDCQKRHIPKLLSQRAW 271
           TILKILGG  +   + H+ ++L + A+
Sbjct: 63  TILKILGGKHM--VEPHMVRVLGRSAF 87


>gb|ADE77121.1| unknown [Picea sitchensis]
          Length = 329

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 50/83 (60%), Positives = 62/83 (74%)
 Frame = -2

Query: 519 EDKATPTVVIYNLWFTYPGINGHPPPGSKPLIQDFSLTLNPADHVLLVGANDAGKTTILK 340
           +D  + TV I NL FTYPGI+GHPPPG+KPLIQ+FSLTL   D  LLVGAN AGKTTILK
Sbjct: 4   DDMKSVTVEINNLNFTYPGIDGHPPPGAKPLIQNFSLTLRAGDRCLLVGANGAGKTTILK 63

Query: 339 ILGGNTIDCQKRHIPKLLSQRAW 271
           ILGG  +   + H+ ++L + A+
Sbjct: 64  ILGGKHM--VEPHMVRVLGRSAF 84


>ref|XP_004139526.1| PREDICTED: ABC transporter I family member 20-like [Cucumis
           sativus] gi|449518083|ref|XP_004166073.1| PREDICTED: ABC
           transporter I family member 20-like [Cucumis sativus]
          Length = 326

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 51/87 (58%), Positives = 65/87 (74%)
 Frame = -2

Query: 531 IPSSEDKATPTVVIYNLWFTYPGINGHPPPGSKPLIQDFSLTLNPADHVLLVGANDAGKT 352
           +PSS+    PT+VI  L FTYPGI+GHPP GSKPLI++FSLTLN  D  LLVG+N AGKT
Sbjct: 1   MPSSD----PTIVIDRLRFTYPGIDGHPPSGSKPLIENFSLTLNAGDRCLLVGSNGAGKT 56

Query: 351 TILKILGGNTIDCQKRHIPKLLSQRAW 271
           TILKILGG  +   + H+ ++L + A+
Sbjct: 57  TILKILGGKHM--VEPHMVRVLGRSAF 81


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