BLASTX nr result

ID: Cnidium21_contig00021173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021173
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281168.1| PREDICTED: ABC transporter I family member 2...   422   e-116
emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]   422   e-116
ref|XP_003536037.1| PREDICTED: ABC transporter I family member 2...   417   e-114
ref|XP_002873045.1| non-intrinsic abc protein 9 [Arabidopsis lyr...   416   e-114
ref|NP_195847.1| ABC transporter I family member 20 [Arabidopsis...   416   e-114

>ref|XP_002281168.1| PREDICTED: ABC transporter I family member 20 isoform 1 [Vitis
            vinifera] gi|296089817|emb|CBI39636.3| unnamed protein
            product [Vitis vinifera]
          Length = 329

 Score =  422 bits (1085), Expect = e-116
 Identities = 211/281 (75%), Positives = 235/281 (83%), Gaps = 4/281 (1%)
 Frame = -1

Query: 1033 LLVGANGAGKTTILKILGGKHMVDQDMVRVMGRSAFHDTGLISSAQLCYLGGEWRREVAF 854
            LLVG+NGAGKTTILKILGGKHMV+  MVRV+GRSAFHDT L SS  LCYLGGEWRR+VAF
Sbjct: 49   LLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAF 108

Query: 853  AGFDVPIQMDISAEKMIYGVSGVDPQRRDELIKVLDVNLSWRLHKVSDGQRRRVQICMGL 674
            AGF+VPIQMD+SAEKMI+GVSG+DPQRR ELIKVLD++LSWRLHKVSDGQRRRVQICMGL
Sbjct: 109  AGFEVPIQMDVSAEKMIFGVSGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGL 168

Query: 673  LKPFKVLLLDEITXXXXXXXXXXXLSFLKKDCEERGATIIYATHIFDGLENWPSHIVYVA 494
            LKPFKVLLLDEIT           L FL+K+CEERGATIIYATHIFDGLENWPSH+VYVA
Sbjct: 169  LKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVA 228

Query: 493  HGKLQLAMPMDEVKKISKLSLMRTVESWLXXXXXXXXXXXXXXXXKGLPEFEDQVDGTRV 314
            HGKLQLAMPM++V+++S LSLMRTVESWL                 GLPEFE QV+G+RV
Sbjct: 229  HGKLQLAMPMEKVREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRV 288

Query: 313  IGDPA----RPVNNGWAAGRLNSTVAGEENFVLSSNRVIRQ 203
             GDPA    R +NNGWAAGRL+ST+AGEENF LSSN V+RQ
Sbjct: 289  AGDPARAAVRALNNGWAAGRLHSTIAGEENFFLSSNSVLRQ 329


>emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]
          Length = 329

 Score =  422 bits (1085), Expect = e-116
 Identities = 211/281 (75%), Positives = 235/281 (83%), Gaps = 4/281 (1%)
 Frame = -1

Query: 1033 LLVGANGAGKTTILKILGGKHMVDQDMVRVMGRSAFHDTGLISSAQLCYLGGEWRREVAF 854
            LLVG+NGAGKTTILKILGGKHMV+  MVRV+GRSAFHDT L SS  LCYLGGEWRR+VAF
Sbjct: 49   LLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAF 108

Query: 853  AGFDVPIQMDISAEKMIYGVSGVDPQRRDELIKVLDVNLSWRLHKVSDGQRRRVQICMGL 674
            AGF+VPIQMD+SAEKMI+GVSG+DPQRR ELIKVLD++LSWRLHKVSDGQRRRVQICMGL
Sbjct: 109  AGFEVPIQMDVSAEKMIFGVSGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGL 168

Query: 673  LKPFKVLLLDEITXXXXXXXXXXXLSFLKKDCEERGATIIYATHIFDGLENWPSHIVYVA 494
            LKPFKVLLLDEIT           L FL+K+CEERGATIIYATHIFDGLENWPSH+VYVA
Sbjct: 169  LKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVA 228

Query: 493  HGKLQLAMPMDEVKKISKLSLMRTVESWLXXXXXXXXXXXXXXXXKGLPEFEDQVDGTRV 314
            HGKLQLAMPM++V+++S LSLMRTVESWL                 GLPEFE QV+G+RV
Sbjct: 229  HGKLQLAMPMEKVREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRV 288

Query: 313  IGDPA----RPVNNGWAAGRLNSTVAGEENFVLSSNRVIRQ 203
             GDPA    R +NNGWAAGRL+ST+AGEENF LSSN V+RQ
Sbjct: 289  AGDPARAAVRALNNGWAAGRLHSTIAGEENFFLSSNSVLRQ 329


>ref|XP_003536037.1| PREDICTED: ABC transporter I family member 20-like [Glycine max]
          Length = 333

 Score =  417 bits (1071), Expect = e-114
 Identities = 210/281 (74%), Positives = 236/281 (83%), Gaps = 4/281 (1%)
 Frame = -1

Query: 1033 LLVGANGAGKTTILKILGGKHMVDQDMVRVMGRSAFHDTGLISSAQLCYLGGEWRREVAF 854
            LLVG+NGAGKTT+LKILGGKH+V+ DMVRV+GRSAFHDT LISS  LCYLGGEWRR+VAF
Sbjct: 53   LLVGSNGAGKTTLLKILGGKHLVEPDMVRVLGRSAFHDTTLISSGDLCYLGGEWRRDVAF 112

Query: 853  AGFDVPIQMDISAEKMIYGVSGVDPQRRDELIKVLDVNLSWRLHKVSDGQRRRVQICMGL 674
            AGF+VPIQMDISA+KMI+GV G+DPQRR ELIKVLD++LSWRLHKVSDGQRRRVQICMGL
Sbjct: 113  AGFEVPIQMDISAQKMIFGVPGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGL 172

Query: 673  LKPFKVLLLDEITXXXXXXXXXXXLSFLKKDCEERGATIIYATHIFDGLENWPSHIVYVA 494
            LKPFKVLLLDEIT           L FL+K+C+ERGATIIYATHIFDGLE+WP++IVYVA
Sbjct: 173  LKPFKVLLLDEITVDLDVLARADLLRFLRKECDERGATIIYATHIFDGLEDWPTNIVYVA 232

Query: 493  HGKLQLAMPMDEVKKISKLSLMRTVESWLXXXXXXXXXXXXXXXXKGLPEFEDQVDGTRV 314
            HGKLQLAMPMD+VK+ISKLSLMRTVESWL                 GLPEF  +V+ +RV
Sbjct: 233  HGKLQLAMPMDKVKEISKLSLMRTVESWLRKERDEDRKKRKERKAAGLPEFGKRVEESRV 292

Query: 313  IGDPARP----VNNGWAAGRLNSTVAGEENFVLSSNRVIRQ 203
             GDPAR     +NNGWAAGRL STVAGEENF+LSSNRV+RQ
Sbjct: 293  TGDPARAAVRVINNGWAAGRLTSTVAGEENFLLSSNRVLRQ 333


>ref|XP_002873045.1| non-intrinsic abc protein 9 [Arabidopsis lyrata subsp. lyrata]
            gi|297318882|gb|EFH49304.1| non-intrinsic abc protein 9
            [Arabidopsis lyrata subsp. lyrata]
          Length = 328

 Score =  416 bits (1068), Expect = e-114
 Identities = 208/277 (75%), Positives = 235/277 (84%), Gaps = 1/277 (0%)
 Frame = -1

Query: 1033 LLVGANGAGKTTILKILGGKHMVDQDMVRVMGRSAFHDTGLISSAQLCYLGGEWRREVAF 854
            LLVG+NGAGKTTILKILGGKHMV+  MVRV+GRSAFHDTGL SS  LCYLGGEWRR+VAF
Sbjct: 52   LLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAF 111

Query: 853  AGFDVPIQMDISAEKMIYGVSGVDPQRRDELIKVLDVNLSWRLHKVSDGQRRRVQICMGL 674
            AGF+VPIQMDISAEKMI+GV+G+DPQRRDELIKVLD+++SWRLHKVSDGQRRRVQICMGL
Sbjct: 112  AGFEVPIQMDISAEKMIFGVAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGL 171

Query: 673  LKPFKVLLLDEITXXXXXXXXXXXLSFLKKDCEERGATIIYATHIFDGLENWPSHIVYVA 494
            LKPFKVLLLDEIT           L FL+K+CEERGATIIYATHIFDGLE+WP++IVYVA
Sbjct: 172  LKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTNIVYVA 231

Query: 493  HGKLQLAMPMDEVKKISKLSLMRTVESWLXXXXXXXXXXXXXXXXKGLPEFEDQVDGTRV 314
            HGKLQLA+PM++VK+ SK SLMRTVESWL                 GLPEFE + + +RV
Sbjct: 232  HGKLQLALPMEKVKETSKKSLMRTVESWLRKERDEERKRRTERKANGLPEFETRTEESRV 291

Query: 313  IGDPARPVNNGWAAGRLNSTVA-GEENFVLSSNRVIR 206
             GDPAR +NNGWAAGRL+STVA GE+NFVLSSNRV+R
Sbjct: 292  TGDPARMLNNGWAAGRLHSTVAGGEDNFVLSSNRVLR 328


>ref|NP_195847.1| ABC transporter I family member 20 [Arabidopsis thaliana]
            gi|75335697|sp|Q9LZ98.1|AB20I_ARATH RecName: Full=ABC
            transporter I family member 20; Short=ABC transporter
            ABCI.20; Short=AtABCI20; AltName: Full=GCN-related
            protein 3; AltName: Full=Non-intrinsic ABC protein 9
            gi|13899119|gb|AAK48981.1|AF370554_1 ABC transporter-like
            protein [Arabidopsis thaliana] gi|7406423|emb|CAB85532.1|
            ABC transporter-like protein [Arabidopsis thaliana]
            gi|21554262|gb|AAM63337.1| ABC transporter-like protein
            [Arabidopsis thaliana] gi|30984550|gb|AAP42738.1|
            At5g02270 [Arabidopsis thaliana]
            gi|332003069|gb|AED90452.1| ABC transporter I family
            member 20 [Arabidopsis thaliana]
          Length = 328

 Score =  416 bits (1068), Expect = e-114
 Identities = 208/277 (75%), Positives = 235/277 (84%), Gaps = 1/277 (0%)
 Frame = -1

Query: 1033 LLVGANGAGKTTILKILGGKHMVDQDMVRVMGRSAFHDTGLISSAQLCYLGGEWRREVAF 854
            LLVG+NGAGKTTILKILGGKHMV+  MVRV+GRSAFHDTGL SS  LCYLGGEWRR+VAF
Sbjct: 52   LLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAF 111

Query: 853  AGFDVPIQMDISAEKMIYGVSGVDPQRRDELIKVLDVNLSWRLHKVSDGQRRRVQICMGL 674
            AGF+VPIQMDISAEKMI+GV+G+DPQRRDELIKVLD+++SWRLHKVSDGQRRRVQICMGL
Sbjct: 112  AGFEVPIQMDISAEKMIFGVAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGL 171

Query: 673  LKPFKVLLLDEITXXXXXXXXXXXLSFLKKDCEERGATIIYATHIFDGLENWPSHIVYVA 494
            LKPFKVLLLDEIT           L FL+K+CEERGATIIYATHIFDGLE+WP+HIVYVA
Sbjct: 172  LKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVA 231

Query: 493  HGKLQLAMPMDEVKKISKLSLMRTVESWLXXXXXXXXXXXXXXXXKGLPEFEDQVDGTRV 314
            +GKLQLA+PM++VK+ SK SLMRTVESWL                 GLPEFE + + +RV
Sbjct: 232  NGKLQLALPMEKVKETSKKSLMRTVESWLRKERDEERKRRKERKANGLPEFETRTEESRV 291

Query: 313  IGDPARPVNNGWAAGRLNSTVA-GEENFVLSSNRVIR 206
             GDPAR +NNGWAAGRL+STVA GE+NFVLSSNRV+R
Sbjct: 292  TGDPARMLNNGWAAGRLHSTVAGGEDNFVLSSNRVLR 328


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