BLASTX nr result

ID: Cnidium21_contig00021169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021169
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20540.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-l...   106   2e-21
ref|XP_002517570.1| peroxisome biogenesis factor, putative [Rici...   102   3e-20
ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-l...   101   6e-20
gb|AAG44817.1| peroxisome biogenesis protein PEX1 [Arabidopsis t...    92   3e-17

>emb|CBI20540.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/91 (58%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
 Frame = -1

Query: 259 SILSQVGLVHQGMRFPLWLHGRTIITFLVVSTFPKNHIVQLKPGTEIAVAPKRRKTNVD- 83
           +IL Q+G+VH+ MRFPLWLHGRT ITFLVVSTFPK  +VQL PGTE+AVAPKRRK  +D 
Sbjct: 119 AILKQIGIVHEAMRFPLWLHGRTTITFLVVSTFPKKAVVQLVPGTEVAVAPKRRKKYLDS 178

Query: 82  ----FXXXXXXXXSVAKALLRIQDPDSRFTH 2
                         +AKALLR+QD   +  H
Sbjct: 179 HKNALVQSSNKDHPIAKALLRVQDSGQKLIH 209


>ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-like [Vitis vinifera]
          Length = 1134

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/91 (58%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
 Frame = -1

Query: 259 SILSQVGLVHQGMRFPLWLHGRTIITFLVVSTFPKNHIVQLKPGTEIAVAPKRRKTNVD- 83
           +IL Q+G+VH+ MRFPLWLHGRT ITFLVVSTFPK  +VQL PGTE+AVAPKRRK  +D 
Sbjct: 119 AILKQIGIVHEAMRFPLWLHGRTTITFLVVSTFPKKAVVQLVPGTEVAVAPKRRKKYLDS 178

Query: 82  ----FXXXXXXXXSVAKALLRIQDPDSRFTH 2
                         +AKALLR+QD   +  H
Sbjct: 179 HKNALVQSSNKDHPIAKALLRVQDSGQKLIH 209


>ref|XP_002517570.1| peroxisome biogenesis factor, putative [Ricinus communis]
           gi|223543202|gb|EEF44734.1| peroxisome biogenesis
           factor, putative [Ricinus communis]
          Length = 1137

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/88 (60%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
 Frame = -1

Query: 259 SILSQVGLVHQGMRFPLWLHGRTIITFLVVSTFPKNHIVQLKPGTEIAVAPKRRKT--NV 86
           +IL+QV +VH+ M+FPLWLHGRTIITF VVST PK  +VQL PGTE+AVAPKRRKT  N 
Sbjct: 121 AILNQVRIVHETMKFPLWLHGRTIITFHVVSTLPKKAVVQLVPGTEVAVAPKRRKTDLNK 180

Query: 85  DFXXXXXXXXSVAKALLRIQDPDSRFTH 2
                      + KALLR+QD D R  H
Sbjct: 181 QDLQSSSKEFKITKALLRLQDSDRRLLH 208


>ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-like [Glycine max]
          Length = 1130

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/84 (61%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
 Frame = -1

Query: 256 ILSQVGLVHQGMRFPLWLHGRTIITFLVVSTFPKNHIVQLKPGTEIAVAPKRRKTNV--- 86
           ILSQV +VH+GMRFPLWLHG T+ITF V S FPKN +VQL PGTE+AVAPKRRK +    
Sbjct: 123 ILSQVRIVHEGMRFPLWLHGHTVITFQVASVFPKNVVVQLMPGTEVAVAPKRRKKSSDSA 182

Query: 85  -DFXXXXXXXXSVAKALLRIQDPD 17
            D           AK LLR+QDPD
Sbjct: 183 GDSHLDSSNKEHTAKMLLRLQDPD 206


>gb|AAG44817.1| peroxisome biogenesis protein PEX1 [Arabidopsis thaliana]
          Length = 1119

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/86 (53%), Positives = 58/86 (67%)
 Frame = -1

Query: 259 SILSQVGLVHQGMRFPLWLHGRTIITFLVVSTFPKNHIVQLKPGTEIAVAPKRRKTNVDF 80
           +ILSQV ++H+ M+FPLWLH RT+I F VVSTFP   +VQL PGTE+AVAPKRR  N+  
Sbjct: 121 AILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLKA 180

Query: 79  XXXXXXXXSVAKALLRIQDPDSRFTH 2
                   +  KALLR+Q+ D    H
Sbjct: 181 KKSQEKECNNVKALLRVQETDRSAFH 206


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