BLASTX nr result

ID: Cnidium21_contig00021165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021165
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234177.1| auxin efflux facilitator SlPIN3 [Solanum lyc...   265   4e-69
dbj|BAJ09456.1| auxin efflux carrier [Solanum lycopersicum]           265   4e-69
ref|XP_002876748.1| pin-formed 4 [Arabidopsis lyrata subsp. lyra...   265   4e-69
ref|NP_001234184.1| auxin efflux facilitator SlPIN4 [Solanum lyc...   265   7e-69
dbj|BAJ09455.1| auxin efflux carrier [Solanum lycopersicum]           265   7e-69

>ref|NP_001234177.1| auxin efflux facilitator SlPIN3 [Solanum lycopersicum]
           gi|312983230|gb|ADR30411.1| auxin efflux facilitator
           SlPIN3 [Solanum lycopersicum]
          Length = 604

 Score =  265 bits (678), Expect = 4e-69
 Identities = 128/141 (90%), Positives = 135/141 (95%)
 Frame = +2

Query: 233 MISWHDLYTVLTAVFPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 412
           MISWHDLY VLTAV PLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS
Sbjct: 1   MISWHDLYVVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 413 NNNPYEMNFRFIAADTLQKIIMLVVLGLWAKLSKNGNLEWMITIFSLSTLPNTLVMGIPL 592
            NNPYEMNFRFIAADTLQK+IML+VL +W+ ++KNG+LEW ITIFSLSTLPNTLVMGIPL
Sbjct: 61  MNNPYEMNFRFIAADTLQKVIMLIVLCIWSNVTKNGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 593 LIAMYGDYSGSLMVQVVVLQC 655
           LIAMYGDYSGSLMVQVVVLQC
Sbjct: 121 LIAMYGDYSGSLMVQVVVLQC 141


>dbj|BAJ09456.1| auxin efflux carrier [Solanum lycopersicum]
          Length = 613

 Score =  265 bits (678), Expect = 4e-69
 Identities = 128/141 (90%), Positives = 135/141 (95%)
 Frame = +2

Query: 233 MISWHDLYTVLTAVFPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 412
           MISWHDLY VLTAV PLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS
Sbjct: 1   MISWHDLYVVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 413 NNNPYEMNFRFIAADTLQKIIMLVVLGLWAKLSKNGNLEWMITIFSLSTLPNTLVMGIPL 592
            NNPYEMNFRFIAADTLQK+IML+VL +W+ ++KNG+LEW ITIFSLSTLPNTLVMGIPL
Sbjct: 61  MNNPYEMNFRFIAADTLQKVIMLIVLCIWSNVTKNGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 593 LIAMYGDYSGSLMVQVVVLQC 655
           LIAMYGDYSGSLMVQVVVLQC
Sbjct: 121 LIAMYGDYSGSLMVQVVVLQC 141


>ref|XP_002876748.1| pin-formed 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297322586|gb|EFH53007.1| pin-formed 4 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 610

 Score =  265 bits (678), Expect = 4e-69
 Identities = 128/141 (90%), Positives = 136/141 (96%)
 Frame = +2

Query: 233 MISWHDLYTVLTAVFPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 412
           MI+WHDLYTVLTAV PLYVAMILAYGSV+WWKIFSPDQCSGINRFVAIFAVPLLSFHFIS
Sbjct: 1   MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 413 NNNPYEMNFRFIAADTLQKIIMLVVLGLWAKLSKNGNLEWMITIFSLSTLPNTLVMGIPL 592
            N+PY MNFRF+AADTLQKIIMLV+LGLWA L+KNG+LEWMITIFSLSTLPNTLVMGIPL
Sbjct: 61  TNDPYAMNFRFVAADTLQKIIMLVLLGLWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120

Query: 593 LIAMYGDYSGSLMVQVVVLQC 655
           LIAMYG Y+GSLMVQVVVLQC
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQC 141


>ref|NP_001234184.1| auxin efflux facilitator SlPIN4 [Solanum lycopersicum]
           gi|312983228|gb|ADR30410.1| auxin efflux facilitator
           SlPIN4 [Solanum lycopersicum]
          Length = 653

 Score =  265 bits (676), Expect = 7e-69
 Identities = 128/141 (90%), Positives = 135/141 (95%)
 Frame = +2

Query: 233 MISWHDLYTVLTAVFPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 412
           MI+WHDLY VLTAV PLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFI+
Sbjct: 1   MITWHDLYVVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIA 60

Query: 413 NNNPYEMNFRFIAADTLQKIIMLVVLGLWAKLSKNGNLEWMITIFSLSTLPNTLVMGIPL 592
            NNPYEMNFRFIAAD+LQK+IMLVVL LWA L+KNG+LEW ITIFSLSTLPNTLVMGIPL
Sbjct: 61  MNNPYEMNFRFIAADSLQKVIMLVVLSLWANLTKNGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 593 LIAMYGDYSGSLMVQVVVLQC 655
           LIAMYG+YSGSLMVQVVVLQC
Sbjct: 121 LIAMYGEYSGSLMVQVVVLQC 141


>dbj|BAJ09455.1| auxin efflux carrier [Solanum lycopersicum]
          Length = 653

 Score =  265 bits (676), Expect = 7e-69
 Identities = 128/141 (90%), Positives = 135/141 (95%)
 Frame = +2

Query: 233 MISWHDLYTVLTAVFPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 412
           MI+WHDLY VLTAV PLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFI+
Sbjct: 1   MITWHDLYVVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIA 60

Query: 413 NNNPYEMNFRFIAADTLQKIIMLVVLGLWAKLSKNGNLEWMITIFSLSTLPNTLVMGIPL 592
            NNPYEMNFRFIAAD+LQK+IMLVVL LWA L+KNG+LEW ITIFSLSTLPNTLVMGIPL
Sbjct: 61  MNNPYEMNFRFIAADSLQKVIMLVVLSLWANLTKNGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 593 LIAMYGDYSGSLMVQVVVLQC 655
           LIAMYG+YSGSLMVQVVVLQC
Sbjct: 121 LIAMYGEYSGSLMVQVVVLQC 141


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