BLASTX nr result

ID: Cnidium21_contig00021144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021144
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003579622.1| PREDICTED: 2-oxoglutarate dehydrogenase, mit...    78   6e-13
ref|XP_004147698.1| PREDICTED: 2-oxoglutarate dehydrogenase, mit...    77   1e-12
ref|NP_001060747.1| Os07g0695800 [Oryza sativa Japonica Group] g...    76   3e-12
ref|XP_002312072.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Rici...    75   7e-12

>ref|XP_003579622.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like
            [Brachypodium distachyon]
          Length = 1016

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 50/103 (48%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
 Frame = -3

Query: 275  LIVMAPNNLLRHRVQIKSI-RV*CCPGSPGL*QTWYPFQAPHKGPK*PRILS-------- 123
            LIVM+P NLLRH+    S+       G PG  +    F+   K     + L         
Sbjct: 833  LIVMSPKNLLRHKECKSSLSEFDDVAGHPGFDKQGTRFKRLIKDRNDHKDLEEGINRLVL 892

Query: 122  ---MVYYELDEERMKHDNKDVTICRVEQLCPFPYDLIQHELKR 3
                VYYELDEER K D  DV ICRVEQLCPFPYDLIQ ELKR
Sbjct: 893  CSGKVYYELDEERKKSDRNDVAICRVEQLCPFPYDLIQRELKR 935


>ref|XP_004147698.1| PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Cucumis
            sativus] gi|449518101|ref|XP_004166082.1| PREDICTED:
            2-oxoglutarate dehydrogenase, mitochondrial-like [Cucumis
            sativus]
          Length = 1022

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/103 (46%), Positives = 59/103 (57%), Gaps = 12/103 (11%)
 Frame = -3

Query: 275  LIVMAPNNLLRHRVQIKSI-RV*CCPGSPGL*QTWYPFQ---------APHKGPK*PRIL 126
            L+VMAP NLLRH+    ++       G PG  +    F+         + H+      +L
Sbjct: 839  LVVMAPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNNHSDHEEGIRRLVL 898

Query: 125  --SMVYYELDEERMKHDNKDVTICRVEQLCPFPYDLIQHELKR 3
                +YYELD+ER K D KDV ICRVEQLCPFPYDLIQ ELKR
Sbjct: 899  CSGKIYYELDDERTKSDGKDVAICRVEQLCPFPYDLIQRELKR 941


>ref|NP_001060747.1| Os07g0695800 [Oryza sativa Japonica Group]
            gi|34394039|dbj|BAC84070.1| putative 2-oxoglutarate
            dehydrogenase, E1 subunit [Oryza sativa Japonica Group]
            gi|113612283|dbj|BAF22661.1| Os07g0695800 [Oryza sativa
            Japonica Group] gi|215713493|dbj|BAG94630.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1008

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 52/103 (50%), Positives = 59/103 (57%), Gaps = 12/103 (11%)
 Frame = -3

Query: 275  LIVMAPNNLLRHRVQIKSI-RV*CCPGSPGL*QTWYPFQA------PHK----GPK*PRI 129
            LIVMAP NLLRH+    ++       G PG  +    F+        HK    G K   +
Sbjct: 826  LIVMAPKNLLRHKDCKSNLSEFDDVEGHPGFDKQGTRFKRLIKDRNDHKQVEEGIKRLVL 885

Query: 128  LS-MVYYELDEERMKHDNKDVTICRVEQLCPFPYDLIQHELKR 3
             S  VYYELDEER K +  DV ICRVEQLCPFPYDLIQ ELKR
Sbjct: 886  CSGKVYYELDEERKKTERSDVAICRVEQLCPFPYDLIQRELKR 928


>ref|XP_002312072.1| predicted protein [Populus trichocarpa] gi|222851892|gb|EEE89439.1|
            predicted protein [Populus trichocarpa]
          Length = 1021

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 48/103 (46%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
 Frame = -3

Query: 275  LIVMAPNNLLRHRVQIKSI-RV*CCPGSPGL*QTWYPFQAPHKGPK*PRILS-------- 123
            L+VMAP NLLRH+    ++       G PG  +    F+   K       L         
Sbjct: 838  LVVMAPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDLEEGIRRLVL 897

Query: 122  ---MVYYELDEERMKHDNKDVTICRVEQLCPFPYDLIQHELKR 3
                VYYELDEER K + KD+ ICRVEQLCPFPYDLIQ ELKR
Sbjct: 898  CSGKVYYELDEERRKVEAKDIAICRVEQLCPFPYDLIQRELKR 940


>ref|XP_002528465.1| 2-oxoglutarate dehydrogenase, putative [Ricinus communis]
            gi|223532141|gb|EEF33948.1| 2-oxoglutarate dehydrogenase,
            putative [Ricinus communis]
          Length = 1021

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 50/103 (48%), Positives = 55/103 (53%), Gaps = 12/103 (11%)
 Frame = -3

Query: 275  LIVMAPNNLLRHRVQIKSI-RV*CCPGSPGL*QTWYPFQAPHKGPK*PRILS-------- 123
            LIVMAP NLLRH+    ++       G PG  +    F+   K       L         
Sbjct: 838  LIVMAPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDLEEGIRRLVL 897

Query: 122  ---MVYYELDEERMKHDNKDVTICRVEQLCPFPYDLIQHELKR 3
                VYYELDEER K   KDV ICRVEQLCPFPYDLIQ ELKR
Sbjct: 898  CSGKVYYELDEERKKIGAKDVAICRVEQLCPFPYDLIQRELKR 940


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