BLASTX nr result
ID: Cnidium21_contig00021132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00021132
(1697 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 666 0.0
gb|ACB28472.1| polyprotein [Ananas comosus] 645 0.0
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 637 e-180
emb|CAJ00278.1| hypothetical protein [Lotus japonicus] 628 e-177
emb|CAJ00274.1| hypothetical protein [Lotus japonicus] 627 e-177
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 666 bits (1719), Expect = 0.0
Identities = 312/564 (55%), Positives = 409/564 (72%)
Frame = +1
Query: 1 EHLSHLQLVLQLMQENSLHANLKKCSFGQPEVHYLGHVISDKGVHTEQDKIMSIVDWPTP 180
EH HL+ V ++M+ N L A L KC+F P+V YLGH IS +G+ T+ KI ++ +WP P
Sbjct: 766 EHRQHLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAKIKAVKEWPQP 825
Query: 181 KNVKQLRGFLGLTGYYRRFIQDYGKVCKPLTLLLRKDAF*WSSQAQVAFDMLKSKMTNPP 360
+KQLRGFLGL GYYRRF++ +G + PL L + DAF W++ AQ AF+ LK+ + P
Sbjct: 826 TTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALTKTDAFEWTAVAQQAFEDLKAALCQAP 885
Query: 361 VLALPNFNKPFVIETDASGIGMGAVLMQEGHPIXXXXXXXXXXXXXXXXYERELLAIVFA 540
VL+LP F+K FV+ETDA G G+GAVLMQEGHP+ YE+ELLA++FA
Sbjct: 886 VLSLPLFDKQFVVETDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFA 945
Query: 541 VTKWQHYLLSLPFIIRTDQQSLKHLLEHKLSTPFQQKWLSKLAGFDYTVEYKCGRENKVA 720
V KW+HYLL FII+TDQ+SLK+LLE +L+TP QQ+WL KL FDY ++Y+ G+EN VA
Sbjct: 946 VRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVA 1005
Query: 721 DALSRLSSLQIFTMAISSIHSQLMDDIKLHWKTDDTLKNLINDLQLDPESHRKYTWQQDI 900
DALSR+ ++ MA++ + L+ DI+ + D L+++I LQ DP+S + ++W Q+I
Sbjct: 1006 DALSRVEGSEVLHMAMTVVECDLLKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNI 1065
Query: 901 LLKKGRMVIGDSSSLKNKILEWMHSSNQGGHSGVHATMQRTKTLFYWSKMKQSIVDFIKL 1080
L +K ++V+ + ++KN IL W+H S GGHSG T QR K LFYW M + I +I+
Sbjct: 1066 LRRKSKIVVPANDNIKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRS 1125
Query: 1081 CTICQKCKYDSSASPGLLQPLPIPTAVWEEVTMDFIEGLPKSQGREVIMVVIDRLSKYGH 1260
C CQ+CK D +ASPGLLQPLPIP +W EV+MDFIEGLP S G+ VIMVV+DRLSK H
Sbjct: 1126 CGTCQQCKSDPAASPGLLQPLPIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAH 1185
Query: 1261 FIALKHPFSALTVAQVYLDNIFKLHGSPKSIISDRDKVFTSTFWTEFMRLQGVQIKLSTA 1440
FIAL HP+SALTVA YLDN+FKLHG P SI+SDRD VFTS FW EF LQGV +KL++A
Sbjct: 1186 FIALSHPYSALTVAHAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSA 1245
Query: 1441 YHPQTDGQSEVLNRCLETYLRCMCHEVPHEWFKWLPLAEFWYNSTFHTAIRKTPFEIMYN 1620
YHPQ+DGQ+EV+NRCLETYLRCMCH+ P W KWL LAE+WYN+ +H++ R TPFEI+Y
Sbjct: 1246 YHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYG 1305
Query: 1621 QPPPIHIPYILGSSLLDTVDRSMQ 1692
Q PP+H+PY+ G S + V RS+Q
Sbjct: 1306 QVPPVHLPYLPGESKVAVVARSLQ 1329
>gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 645 bits (1663), Expect = 0.0
Identities = 297/563 (52%), Positives = 409/563 (72%)
Frame = +1
Query: 1 EHLSHLQLVLQLMQENSLHANLKKCSFGQPEVHYLGHVISDKGVHTEQDKIMSIVDWPTP 180
EHL HL+ Q+++++SL KKC F ++ YLGHVIS +GV ++ K+ +I +WP P
Sbjct: 394 EHLCHLRTTFQVLRQHSLFVRRKKCIFAAVQLEYLGHVISHEGVSMDKKKVEAIQEWPLP 453
Query: 181 KNVKQLRGFLGLTGYYRRFIQDYGKVCKPLTLLLRKDAF*WSSQAQVAFDMLKSKMTNPP 360
K+LRGFLGL GYYRRF++D+GK+ K L +L K+ F W+++ AF LK ++ P
Sbjct: 454 TTAKELRGFLGLAGYYRRFVKDFGKISKSLHEMLGKEGFKWTNERHYAFQQLKKAVSAAP 513
Query: 361 VLALPNFNKPFVIETDASGIGMGAVLMQEGHPIXXXXXXXXXXXXXXXXYERELLAIVFA 540
VLALP+F F IETDASGIG+GAVL+Q+G PI YERE+LAIV A
Sbjct: 514 VLALPDFTIDFTIETDASGIGVGAVLLQKGRPIAFMSKPLSPRNRQLSTYEREMLAIVIA 573
Query: 541 VTKWQHYLLSLPFIIRTDQQSLKHLLEHKLSTPFQQKWLSKLAGFDYTVEYKCGRENKVA 720
V KW+ YL+ F I+TD QSLK+L+E ++STP QQKW++KL G+DY + YK G+EN VA
Sbjct: 574 VQKWRPYLIGRHFKIKTDHQSLKYLMEQRVSTPSQQKWVAKLMGYDYELIYKKGQENVVA 633
Query: 721 DALSRLSSLQIFTMAISSIHSQLMDDIKLHWKTDDTLKNLINDLQLDPESHRKYTWQQDI 900
DALSR +L +A+S+IH+ L+D IK W DD LK +I Q D S +YTW QD
Sbjct: 634 DALSRSPTL----LAVSAIHTDLLDQIKWSWNVDDKLKKIIQQKQSDINSWPRYTWVQDQ 689
Query: 901 LLKKGRMVIGDSSSLKNKILEWMHSSNQGGHSGVHATMQRTKTLFYWSKMKQSIVDFIKL 1080
L +KG++V+G LK +++ H+S+ GGHSG+ AT ++ K FYW +++ + F++
Sbjct: 690 LRRKGKLVVGSDPGLKLQLIHNFHASSIGGHSGMEATTRKLKGQFYWKGLRRDVEQFVRE 749
Query: 1081 CTICQKCKYDSSASPGLLQPLPIPTAVWEEVTMDFIEGLPKSQGREVIMVVIDRLSKYGH 1260
C++CQ+ KY+++A GLLQPLPIP +W E++MDFIEGLP SQG+EVIMVV+DRLSKY H
Sbjct: 750 CSVCQQNKYETTAPAGLLQPLPIPEGIWTEISMDFIEGLPNSQGKEVIMVVVDRLSKYAH 809
Query: 1261 FIALKHPFSALTVAQVYLDNIFKLHGSPKSIISDRDKVFTSTFWTEFMRLQGVQIKLSTA 1440
FIAL HP++A +VAQ++LDNI+KLHG P+SI+SDRD +F S FW E + V++ LSTA
Sbjct: 810 FIALSHPYTASSVAQLFLDNIYKLHGMPRSIVSDRDTIFVSQFWQELFKRLQVKVNLSTA 869
Query: 1441 YHPQTDGQSEVLNRCLETYLRCMCHEVPHEWFKWLPLAEFWYNSTFHTAIRKTPFEIMYN 1620
YHPQ+DGQ+EV+NRCLE YLRCM E P EW KWLPLAE+WYN+++H++ + TP+E++Y
Sbjct: 870 YHPQSDGQTEVVNRCLENYLRCMAGERPKEWAKWLPLAEWWYNTSYHSSTKATPYEVVYG 929
Query: 1621 QPPPIHIPYILGSSLLDTVDRSM 1689
QPPP+H+PY+ G SL++ VDR++
Sbjct: 930 QPPPLHVPYLAGDSLMEAVDRTL 952
>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 637 bits (1643), Expect = e-180
Identities = 297/564 (52%), Positives = 406/564 (71%)
Frame = +1
Query: 1 EHLSHLQLVLQLMQENSLHANLKKCSFGQPEVHYLGHVISDKGVHTEQDKIMSIVDWPTP 180
EH HL+LV ++M+ + L A K +LGH IS + + T+ KI ++ +WPTP
Sbjct: 745 EHKEHLRLVFEVMRLHKLFAKGSK--------EHLGHFISAREIETDPAKIQAVKEWPTP 796
Query: 181 KNVKQLRGFLGLTGYYRRFIQDYGKVCKPLTLLLRKDAF*WSSQAQVAFDMLKSKMTNPP 360
VKQ+RGFLG GYYRRF++++G + PL L + D F WS +AQ AFD LK+ + N P
Sbjct: 797 TTVKQVRGFLGFAGYYRRFVRNFGVIAGPLHALTKTDGFCWSLEAQSAFDTLKAVLCNAP 856
Query: 361 VLALPNFNKPFVIETDASGIGMGAVLMQEGHPIXXXXXXXXXXXXXXXXYERELLAIVFA 540
VLALP F+K F++ETDA G G+ AVLMQ+GHP+ YE+ELLA +FA
Sbjct: 857 VLALPVFDKQFMVETDACGQGIRAVLMQKGHPLAYISRQLKGKQLHLSIYEKELLAFIFA 916
Query: 541 VTKWQHYLLSLPFIIRTDQQSLKHLLEHKLSTPFQQKWLSKLAGFDYTVEYKCGRENKVA 720
V KW+HYLL FII+TDQ+SLK+LLE +L+TP QQ+WL KL FDY ++Y+ G+EN VA
Sbjct: 917 VRKWRHYLLPSHFIIKTDQRSLKYLLEQRLNTPVQQQWLPKLLEFDYEIQYRQGKENLVA 976
Query: 721 DALSRLSSLQIFTMAISSIHSQLMDDIKLHWKTDDTLKNLINDLQLDPESHRKYTWQQDI 900
DALSR+ ++ MA+S + + +I++ +++D LK++I+ LQ P++ + Y+W QDI
Sbjct: 977 DALSRVEGSEVLHMALSIVECDFLKEIQVAYESDGVLKDIISALQQHPDAKKHYSWSQDI 1036
Query: 901 LLKKGRMVIGDSSSLKNKILEWMHSSNQGGHSGVHATMQRTKTLFYWSKMKQSIVDFIKL 1080
L +K ++V+ + + NK+L+W+H S GG SG A+ QR K+LFYW M + I FI+
Sbjct: 1037 LRRKSKIVVPNDVEITNKLLQWLHCSGMGGRSGRDASHQRVKSLFYWKGMVKDIQAFIRS 1096
Query: 1081 CTICQKCKYDSSASPGLLQPLPIPTAVWEEVTMDFIEGLPKSQGREVIMVVIDRLSKYGH 1260
C CQ+CK D++A PGLLQPLPIP +W +V+MDFIEGLP S G+ VIMVV+DRLSK H
Sbjct: 1097 CGTCQQCKSDNAAYPGLLQPLPIPDKIWCDVSMDFIEGLPNSGGKSVIMVVVDRLSKAAH 1156
Query: 1261 FIALKHPFSALTVAQVYLDNIFKLHGSPKSIISDRDKVFTSTFWTEFMRLQGVQIKLSTA 1440
F+AL HP+SALTVAQ +LDN++K HG P SI+SDRD +FTS FW EF +LQGV++++S+A
Sbjct: 1157 FVALAHPYSALTVAQAFLDNVYKHHGCPTSIVSDRDVLFTSDFWKEFFKLQGVELRMSSA 1216
Query: 1441 YHPQTDGQSEVLNRCLETYLRCMCHEVPHEWFKWLPLAEFWYNSTFHTAIRKTPFEIMYN 1620
YHPQ+DGQ+EV+NRCLE YLRCMCH PH W KWLPLAE+WYN+ +H++ + TPFE++Y
Sbjct: 1217 YHPQSDGQTEVVNRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYHSSSQMTPFELVYG 1276
Query: 1621 QPPPIHIPYILGSSLLDTVDRSMQ 1692
Q PPIH+PY+ G S + V RS+Q
Sbjct: 1277 QAPPIHLPYLPGKSKVAVVARSLQ 1300
>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 628 bits (1619), Expect = e-177
Identities = 292/564 (51%), Positives = 396/564 (70%)
Frame = +1
Query: 4 HLSHLQLVLQLMQENSLHANLKKCSFGQPEVHYLGHVISDKGVHTEQDKIMSIVDWPTPK 183
HL HL+ V +++++S + KC+F P + YLGH IS GV T+ KI +I DWP P
Sbjct: 763 HLQHLREVFAVLRKHSFYVKRSKCAFFTPVIEYLGHFISASGVSTDSTKIKAIQDWPEPV 822
Query: 184 NVKQLRGFLGLTGYYRRFIQDYGKVCKPLTLLLRKDAF*WSSQAQVAFDMLKSKMTNPPV 363
+KQLRGFLGLTGYYRRFI+ Y + PLT LLRKD F WS+ A AF LK+ + PV
Sbjct: 823 TIKQLRGFLGLTGYYRRFIKGYSILASPLTDLLRKDGFHWSAAASAAFLQLKNALVQAPV 882
Query: 364 LALPNFNKPFVIETDASGIGMGAVLMQEGHPIXXXXXXXXXXXXXXXXYERELLAIVFAV 543
LA+P+ KPF +ETDAS G+GAVL+Q+ HP+ Y+RELLA+V AV
Sbjct: 883 LAIPDLQKPFTVETDASSTGIGAVLLQDKHPVAFISKVLSPRNRLLSVYDRELLALVHAV 942
Query: 544 TKWQHYLLSLPFIIRTDQQSLKHLLEHKLSTPFQQKWLSKLAGFDYTVEYKCGRENKVAD 723
TKW YL F I TDQQSLK LLE +LSTP Q +W++KL G Y ++YK G+EN VAD
Sbjct: 943 TKWHQYLAIQQFTILTDQQSLKFLLEQRLSTPAQYRWVTKLMGLSYVIQYKRGKENVVAD 1002
Query: 724 ALSRLSSLQIFTMAISSIHSQLMDDIKLHWKTDDTLKNLINDLQLDPESHRKYTWQQDIL 903
ALSR S ++F +++SS+ S+L + + D+ L+ LI+ + P+ H Y+ L
Sbjct: 1003 ALSRASHGELFQLSVSSVSSELWGLLTQAYAADEALQQLISQVLAQPQLHAHYSVVDGFL 1062
Query: 904 LKKGRMVIGDSSSLKNKILEWMHSSNQGGHSGVHATMQRTKTLFYWSKMKQSIVDFIKLC 1083
+K R++I ++S ++ ILEW+HSS+QGGHSG+ AT+ R K+LF+W + + + DFI+ C
Sbjct: 1063 FRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGIRATVVRIKSLFFWKGLSKDVADFIQKC 1122
Query: 1084 TICQKCKYDSSASPGLLQPLPIPTAVWEEVTMDFIEGLPKSQGREVIMVVIDRLSKYGHF 1263
C +CKY+ ASPGLLQPLPIP VW+ + MDFI+ LPKS G++ I VVIDRLSKY HF
Sbjct: 1123 ETCLRCKYERVASPGLLQPLPIPAGVWQSIAMDFIDKLPKSHGKDAIWVVIDRLSKYAHF 1182
Query: 1264 IALKHPFSALTVAQVYLDNIFKLHGSPKSIISDRDKVFTSTFWTEFMRLQGVQIKLSTAY 1443
I L HP++A T+A++++ +++LHG+P +I+SDRD +FTSTFWT F++ G+ L+TAY
Sbjct: 1183 IPLTHPYTASTLAEIFIKEVYRLHGAPSNIVSDRDPLFTSTFWTAFLQQLGISQSLTTAY 1242
Query: 1444 HPQTDGQSEVLNRCLETYLRCMCHEVPHEWFKWLPLAEFWYNSTFHTAIRKTPFEIMYNQ 1623
HPQ+DGQSEVLNRCLE YLR M + P EW WLPLAE+WYN+T+H+AI+ TP+E++Y Q
Sbjct: 1243 HPQSDGQSEVLNRCLEHYLRAMTWQRPKEWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQ 1302
Query: 1624 PPPIHIPYILGSSLLDTVDRSMQA 1695
PP IH+PY S+++D VDRS A
Sbjct: 1303 PPAIHLPYCPQSTIVDAVDRSFTA 1326
>emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 627 bits (1616), Expect = e-177
Identities = 292/564 (51%), Positives = 396/564 (70%)
Frame = +1
Query: 4 HLSHLQLVLQLMQENSLHANLKKCSFGQPEVHYLGHVISDKGVHTEQDKIMSIVDWPTPK 183
HL HL+ V +++++S + KC+F P + YLGH IS GV T+ KI +I DWP P
Sbjct: 763 HLQHLREVFAVLRKHSFYVKRSKCAFFTPVIEYLGHFISASGVSTDSTKIKAIQDWPEPV 822
Query: 184 NVKQLRGFLGLTGYYRRFIQDYGKVCKPLTLLLRKDAF*WSSQAQVAFDMLKSKMTNPPV 363
+KQLRGFLGLTGYYRRFI+ Y + PLT LLRKD F WS+ A AF LK+ + PV
Sbjct: 823 TIKQLRGFLGLTGYYRRFIKGYSILASPLTDLLRKDGFHWSAAASAAFLQLKNALVQAPV 882
Query: 364 LALPNFNKPFVIETDASGIGMGAVLMQEGHPIXXXXXXXXXXXXXXXXYERELLAIVFAV 543
LA+P+ KPF +ETDAS G+GAVL+Q+ HP+ Y+RELLA+V AV
Sbjct: 883 LAIPDLQKPFTVETDASSTGIGAVLLQDKHPVAFISKVLSPRNRLLSVYDRELLALVHAV 942
Query: 544 TKWQHYLLSLPFIIRTDQQSLKHLLEHKLSTPFQQKWLSKLAGFDYTVEYKCGRENKVAD 723
TKW YL F I TDQQSLK LLE +LSTP Q +W++KL G Y ++YK G+EN VAD
Sbjct: 943 TKWHQYLAIQQFTILTDQQSLKFLLEQRLSTPAQYRWVTKLMGLSYVIQYKRGKENVVAD 1002
Query: 724 ALSRLSSLQIFTMAISSIHSQLMDDIKLHWKTDDTLKNLINDLQLDPESHRKYTWQQDIL 903
ALSR S ++F +++SSI S+L + + D+ L+ LI+ + P+ H Y+ L
Sbjct: 1003 ALSRASHGELFQLSVSSISSELWGLLTQAYAADEALQQLISQVLAQPQLHAHYSVVDGFL 1062
Query: 904 LKKGRMVIGDSSSLKNKILEWMHSSNQGGHSGVHATMQRTKTLFYWSKMKQSIVDFIKLC 1083
+K R++I ++S ++ ILEW+HSS+QGGHSG+ AT+ R K+LF+W + + + DFI+ C
Sbjct: 1063 FRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGIRATVVRIKSLFFWKGLSKDVADFIQKC 1122
Query: 1084 TICQKCKYDSSASPGLLQPLPIPTAVWEEVTMDFIEGLPKSQGREVIMVVIDRLSKYGHF 1263
C +CKY+ ASPGLLQPLPIP VW+ + MDFI+ LPKS G++ I VVIDRLSKY HF
Sbjct: 1123 ETCLRCKYERVASPGLLQPLPIPAGVWQSIAMDFIDKLPKSHGKDAIWVVIDRLSKYAHF 1182
Query: 1264 IALKHPFSALTVAQVYLDNIFKLHGSPKSIISDRDKVFTSTFWTEFMRLQGVQIKLSTAY 1443
I L HP++A T+A++++ +++LHG+P +I+SDRD +FTSTFWT F++ G+ L+TAY
Sbjct: 1183 IPLTHPYTASTLAEIFIKEVYRLHGAPSNIVSDRDPLFTSTFWTAFLQQLGISQSLTTAY 1242
Query: 1444 HPQTDGQSEVLNRCLETYLRCMCHEVPHEWFKWLPLAEFWYNSTFHTAIRKTPFEIMYNQ 1623
HPQ+DGQSEVLNRCLE YLR M + P EW WLPLAE+WYN+T+H+AI+ TP+E++Y Q
Sbjct: 1243 HPQSDGQSEVLNRCLEHYLRAMTWQRPKEWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQ 1302
Query: 1624 PPPIHIPYILGSSLLDTVDRSMQA 1695
PP IH+PY S++++ VDRS A
Sbjct: 1303 PPAIHLPYCPQSTIVEAVDRSFTA 1326