BLASTX nr result

ID: Cnidium21_contig00021057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021057
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633287.1| PREDICTED: lipid-A-disaccharide synthase-lik...   117   8e-25
emb|CBI28885.3| unnamed protein product [Vitis vinifera]              117   8e-25
ref|XP_002320495.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002528957.1| Lipid-A-disaccharide synthase, putative [Ric...   114   8e-24
ref|XP_002885761.1| hypothetical protein ARALYDRAFT_480096 [Arab...   110   1e-22

>ref|XP_003633287.1| PREDICTED: lipid-A-disaccharide synthase-like [Vitis vinifera]
          Length = 460

 Score =  117 bits (294), Expect = 8e-25
 Identities = 55/67 (82%), Positives = 64/67 (95%)
 Frame = +1

Query: 91  MMSKQGLKSLFPIEDIAVMGIWELLPHLHKFKVRLKQTVKAAELFQPHVVVTVDSKGFSF 270
           MMSKQGLK LFP+EDIAVMGIWELLPHL+KF++RLK+T++AA LFQPHVV+T+DSKGFSF
Sbjct: 75  MMSKQGLKPLFPMEDIAVMGIWELLPHLNKFRMRLKETIEAAFLFQPHVVLTIDSKGFSF 134

Query: 271 RLLKQLR 291
           R LKQLR
Sbjct: 135 RFLKQLR 141


>emb|CBI28885.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  117 bits (294), Expect = 8e-25
 Identities = 55/67 (82%), Positives = 64/67 (95%)
 Frame = +1

Query: 91  MMSKQGLKSLFPIEDIAVMGIWELLPHLHKFKVRLKQTVKAAELFQPHVVVTVDSKGFSF 270
           MMSKQGLK LFP+EDIAVMGIWELLPHL+KF++RLK+T++AA LFQPHVV+T+DSKGFSF
Sbjct: 47  MMSKQGLKPLFPMEDIAVMGIWELLPHLNKFRMRLKETIEAAFLFQPHVVLTIDSKGFSF 106

Query: 271 RLLKQLR 291
           R LKQLR
Sbjct: 107 RFLKQLR 113


>ref|XP_002320495.1| predicted protein [Populus trichocarpa] gi|222861268|gb|EEE98810.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/66 (81%), Positives = 64/66 (96%)
 Frame = +1

Query: 94  MSKQGLKSLFPIEDIAVMGIWELLPHLHKFKVRLKQTVKAAELFQPHVVVTVDSKGFSFR 273
           MSK+GL+SLFP+EDI+VMG+WELLPHL+KF+VRLK+T++ A LFQPHVVVTVDSKGFSFR
Sbjct: 54  MSKEGLESLFPMEDISVMGMWELLPHLNKFRVRLKETIEGAILFQPHVVVTVDSKGFSFR 113

Query: 274 LLKQLR 291
           LLKQLR
Sbjct: 114 LLKQLR 119


>ref|XP_002528957.1| Lipid-A-disaccharide synthase, putative [Ricinus communis]
           gi|223531603|gb|EEF33431.1| Lipid-A-disaccharide
           synthase, putative [Ricinus communis]
          Length = 469

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/67 (83%), Positives = 62/67 (92%)
 Frame = +1

Query: 91  MMSKQGLKSLFPIEDIAVMGIWELLPHLHKFKVRLKQTVKAAELFQPHVVVTVDSKGFSF 270
           MMSK+GLKSLFP+EDIAVMGIWELLPHL+KF+ RLK+T +AA  F PHVVVTVDSKGFSF
Sbjct: 85  MMSKEGLKSLFPMEDIAVMGIWELLPHLNKFRERLKETTEAAFSFLPHVVVTVDSKGFSF 144

Query: 271 RLLKQLR 291
           RLLKQLR
Sbjct: 145 RLLKQLR 151


>ref|XP_002885761.1| hypothetical protein ARALYDRAFT_480096 [Arabidopsis lyrata subsp.
           lyrata] gi|297331601|gb|EFH62020.1| hypothetical protein
           ARALYDRAFT_480096 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/67 (74%), Positives = 62/67 (92%)
 Frame = +1

Query: 91  MMSKQGLKSLFPIEDIAVMGIWELLPHLHKFKVRLKQTVKAAELFQPHVVVTVDSKGFSF 270
           +M KQGL SLFP+ED+AVMG+WELLPHL+KF+V+LK+T+ AA  F+PH+VVTVDSKGFSF
Sbjct: 78  LMCKQGLTSLFPMEDLAVMGLWELLPHLYKFRVKLKETIDAAVKFKPHIVVTVDSKGFSF 137

Query: 271 RLLKQLR 291
           RLLK+LR
Sbjct: 138 RLLKELR 144


Top