BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021053
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308737.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88
ref|XP_002885623.1| pentatricopeptide repeat-containing protein ...   331   1e-88
sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-c...   331   2e-88
ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   325   1e-86
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi...   323   3e-86

>ref|XP_002308737.1| predicted protein [Populus trichocarpa] gi|222854713|gb|EEE92260.1|
            predicted protein [Populus trichocarpa]
          Length = 590

 Score =  332 bits (850), Expect = 1e-88
 Identities = 160/219 (73%), Positives = 176/219 (80%)
 Frame = +2

Query: 5    DRAEMFIRNMPIEPDAAVWKALLGACRMHKNAELGAYAAEQVFKLDPNDSGPHIILYNIY 184
            DRA  FI  MPI+P AAVW ALLGACRMHKN ELG YAAE +F+LD +  G H++LYNIY
Sbjct: 372  DRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIY 431

Query: 185  ASXXXXXXXXXXXXXXXXXXVKKEPACSWVEIENAVHMFVANDDTHPQREEIFKMWEKIS 364
            A                   VKKEPACSWVE+EN VH+FVA+DD HPQR EI  MWE+IS
Sbjct: 432  ALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQIS 491

Query: 365  QEIKKIGYVPDPSHVLLFVDQQEREAKLQYHSEKLALAFALLNTPDGSTIRIKKNIRVCG 544
             +IK+IGYVPD SHVLL +DQQEREAKLQYHSEKLALAFALLNTP GSTIRIKKNIR+CG
Sbjct: 492  DKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICG 551

Query: 545  DCHSAFKFVSKLVEREIILRDTNRFHHFSDGSCSCGDYW 661
            DCHSAFKFVSKLVEREII+RDTNRFHHF DG+CSC DYW
Sbjct: 552  DCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590


>ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297331463|gb|EFH61882.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 624

 Score =  331 bits (849), Expect = 1e-88
 Identities = 156/219 (71%), Positives = 174/219 (79%)
 Frame = +2

Query: 5    DRAEMFIRNMPIEPDAAVWKALLGACRMHKNAELGAYAAEQVFKLDPNDSGPHIILYNIY 184
            +RA  FI  MPIEP AA+WKALL ACRMHKN ELGAYAAE VF+LDP+D GPH+ILYNIY
Sbjct: 406  NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 465

Query: 185  ASXXXXXXXXXXXXXXXXXXVKKEPACSWVEIENAVHMFVANDDTHPQREEIFKMWEKIS 364
            AS                  VKKEPACSWVEIENA+HMFVAND+ HPQREEI + WE++ 
Sbjct: 466  ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 525

Query: 365  QEIKKIGYVPDPSHVLLFVDQQEREAKLQYHSEKLALAFALLNTPDGSTIRIKKNIRVCG 544
             +IK++GYVPD SHV++ VDQQERE  LQYHSEK+ALAFALLNTP GSTI IKKNIRVCG
Sbjct: 526  AKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCG 585

Query: 545  DCHSAFKFVSKLVEREIILRDTNRFHHFSDGSCSCGDYW 661
            DCHSA K  SK V REII+RDTNRFHHF DG+CSC DYW
Sbjct: 586  DCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624


>sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial; Flags: Precursor
            gi|9294669|dbj|BAB03018.1| unnamed protein product
            [Arabidopsis thaliana]
          Length = 633

 Score =  331 bits (848), Expect = 2e-88
 Identities = 155/219 (70%), Positives = 175/219 (79%)
 Frame = +2

Query: 5    DRAEMFIRNMPIEPDAAVWKALLGACRMHKNAELGAYAAEQVFKLDPNDSGPHIILYNIY 184
            +RA  FI  MPIEP AA+WKALL ACRMHKN ELGAYAAE VF+LDP+D GPH+ILYNIY
Sbjct: 415  NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474

Query: 185  ASXXXXXXXXXXXXXXXXXXVKKEPACSWVEIENAVHMFVANDDTHPQREEIFKMWEKIS 364
            AS                  VKKEPACSWVEIENA+HMFVAND+ HPQREEI + WE++ 
Sbjct: 475  ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 534

Query: 365  QEIKKIGYVPDPSHVLLFVDQQEREAKLQYHSEKLALAFALLNTPDGSTIRIKKNIRVCG 544
             +IK++GYVPD SHV++ VDQQERE  LQYHSEK+ALAFALLNTP GSTI IKKNIRVCG
Sbjct: 535  AKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCG 594

Query: 545  DCHSAFKFVSKLVEREIILRDTNRFHHFSDGSCSCGDYW 661
            DCH+A K  SK+V REII+RDTNRFHHF DG+CSC DYW
Sbjct: 595  DCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633


>ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  325 bits (832), Expect = 1e-86
 Identities = 153/219 (69%), Positives = 175/219 (79%)
 Frame = +2

Query: 5    DRAEMFIRNMPIEPDAAVWKALLGACRMHKNAELGAYAAEQVFKLDPNDSGPHIILYNIY 184
            + A  FI  MPI+P AAVW ALLGACRMHKN +LG YAAEQ+F+LDP+DSGPH++L NIY
Sbjct: 459  NEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 518

Query: 185  ASXXXXXXXXXXXXXXXXXXVKKEPACSWVEIENAVHMFVANDDTHPQREEIFKMWEKIS 364
            AS                  VKKEPACSWVEIEN VH+FVANDD+HP REEI +MWEKIS
Sbjct: 519  ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 578

Query: 365  QEIKKIGYVPDPSHVLLFVDQQEREAKLQYHSEKLALAFALLNTPDGSTIRIKKNIRVCG 544
             +IK+IGYVPD SHVL F++QQ+RE KLQYHSEKLALAFA+L TP G TIRIKKNIR+CG
Sbjct: 579  GKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICG 638

Query: 545  DCHSAFKFVSKLVEREIILRDTNRFHHFSDGSCSCGDYW 661
            DCHSAFKF S+++ REII+RDTNRFHHF  G CSC DYW
Sbjct: 639  DCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677


>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
            mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  323 bits (829), Expect = 3e-86
 Identities = 152/219 (69%), Positives = 175/219 (79%)
 Frame = +2

Query: 5    DRAEMFIRNMPIEPDAAVWKALLGACRMHKNAELGAYAAEQVFKLDPNDSGPHIILYNIY 184
            + A  FI  MPI+P AAVW ALLG+CRMHKN +LG YAAEQ+F+LDP+DSGPH++L NIY
Sbjct: 460  NEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 519

Query: 185  ASXXXXXXXXXXXXXXXXXXVKKEPACSWVEIENAVHMFVANDDTHPQREEIFKMWEKIS 364
            AS                  VKKEPACSWVEIEN VH+FVANDD+HP REEI +MWEKIS
Sbjct: 520  ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 579

Query: 365  QEIKKIGYVPDPSHVLLFVDQQEREAKLQYHSEKLALAFALLNTPDGSTIRIKKNIRVCG 544
             +IK+IGYVPD SHVL F++QQ+RE KLQYHSEKLALAFA+L TP G TIRIKKNIR+CG
Sbjct: 580  GKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICG 639

Query: 545  DCHSAFKFVSKLVEREIILRDTNRFHHFSDGSCSCGDYW 661
            DCHSAFKF S+++ REII+RDTNRFHHF  G CSC DYW
Sbjct: 640  DCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678