BLASTX nr result
ID: Cnidium21_contig00021043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00021043
(873 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ... 382 e-104
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2... 350 3e-94
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p... 335 6e-90
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ... 335 1e-89
ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic ... 332 5e-89
>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
vinifera]
Length = 2214
Score = 382 bits (981), Expect = e-104
Identities = 187/283 (66%), Positives = 229/283 (80%), Gaps = 6/283 (2%)
Frame = -1
Query: 831 SEGQAMYAGYFPASGSITISVVNTVQNKEITPYVLERQFRDACQAFSVDASVLRDGIVFK 652
SEG+A+Y GYFPAS +I++ VVN QNKE++P ++E+QFR+AC+A S++ R+GI FK
Sbjct: 1483 SEGRAIYVGYFPASRTISVVVVNPFQNKELSPSIIEKQFREACEALSIEPPQPRNGISFK 1542
Query: 651 VDYVGSIKDAEELLQRTIVEYKNRHSGPGIAVIECPYVHSMKSGIRALNEFPRVSMPSNA 472
VDYVG +KDAE+ LQRTI +++++H GP +AVIECP VH +KSGIRAL++ P V++PSNA
Sbjct: 1543 VDYVGYVKDAEKFLQRTINDHRHQHHGPEVAVIECPNVHLLKSGIRALDDLPCVNIPSNA 1602
Query: 471 NDNQYQAIGWQIVATKKGMQRCAASSQW-SEGISLSRYAHIPLGNFELDWLIHTADMFFA 295
D+ YQA+GWQIVA K GMQRCAA++QW +E ISL+RYAH+PLGNFE DWLI TAD+FF+
Sbjct: 1603 RDSHYQALGWQIVAAKIGMQRCAAATQWLNERISLARYAHVPLGNFEPDWLIFTADLFFS 1662
Query: 294 RALRDHQQVLWISDNGNPDLGGTNEEDSCYTDEVDQPVINQSSPIQ----ELKIHHLPVN 127
RALRD QQVLWISDNG PDLGG NEED+C+ DEV QPV+ + ELKIHHL VN
Sbjct: 1663 RALRDQQQVLWISDNGIPDLGGLNEEDTCFADEVHQPVLTYPGAYRKVSVELKIHHLAVN 1722
Query: 126 ALLKSNQVNEMEGGALFGSEHDSSTGPHDFNEQSGVDEAT-CA 1
ALLKSNQVNEMEGGALFG E D + G H FNEQ G DEAT CA
Sbjct: 1723 ALLKSNQVNEMEGGALFGFEQDMNMGAHGFNEQCGFDEATLCA 1765
>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
predicted protein [Populus trichocarpa]
Length = 2221
Score = 350 bits (897), Expect = 3e-94
Identities = 179/282 (63%), Positives = 218/282 (77%), Gaps = 7/282 (2%)
Frame = -1
Query: 831 SEGQAMYAGYFPASGSITISVVNTVQNKEITPYVLERQFRDACQAFSVDASVLRDGIVFK 652
SEG+A+Y Y PA G++++ VVN QNK+ITP LERQFR+ACQA S++A R+ IVFK
Sbjct: 1480 SEGRAIYVIYLPALGTVSVVVVNPYQNKDITPSFLERQFREACQALSIEAIPPRNSIVFK 1539
Query: 651 VDYVGSIKDAEELLQRTIVEYKNRHSGPGIAVIECPYVHSMKSGIRALNEFPRVSMPSNA 472
VDYVG +KDAE++LQ TI E +++H GP +AVIECP H MKSG+ AL++FP VS+PSNA
Sbjct: 1540 VDYVGHVKDAEKILQGTISELRDKHHGPTLAVIECPNAHLMKSGVPALDDFPCVSIPSNA 1599
Query: 471 NDNQYQAIGWQIVATKKGMQRCAASSQW-SEGISLSRYAHIPLGNFELDWLIHTADMFFA 295
D+QYQ +GWQ + K GMQR AASSQW +E ISLSRYAH+PLGNFELDWLI TAD+FF+
Sbjct: 1600 RDSQYQVLGWQQASAKIGMQRSAASSQWLNERISLSRYAHVPLGNFELDWLIFTADVFFS 1659
Query: 294 RALRDHQQVLWISDNGNPDLGGTNEEDSCYTDEVDQPVINQSSPIQ----ELKIHHLPVN 127
RAL D QQVLWISD+G PDLGG +EE +C+ DEV QPV+ + ELKIHHL V+
Sbjct: 1660 RALHDQQQVLWISDDGVPDLGGNHEESTCFADEVQQPVLTYPGAYRKVSVELKIHHLAVD 1719
Query: 126 ALLKSNQVNEMEGGALFGSEHD--SSTGPHDFNEQSGVDEAT 7
ALLKSNQ+NEMEGGAL G + D SST +D QSG DEAT
Sbjct: 1720 ALLKSNQINEMEGGALLGFDQDMNSSTTLYD---QSGFDEAT 1758
>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
communis] gi|223531477|gb|EEF33309.1| DNA polymerase
epsilon, catalytic subunit, putative [Ricinus communis]
Length = 2227
Score = 335 bits (860), Expect = 6e-90
Identities = 172/280 (61%), Positives = 209/280 (74%), Gaps = 5/280 (1%)
Frame = -1
Query: 831 SEGQAMYAGYFPASGSITISVVNTVQNKEITPYVLERQFRDACQAFSVDASVLRDGIVFK 652
SEG+A+ Y P ++++ VVN QNK+++P LERQFR+AC A SV+ R+ IVFK
Sbjct: 1487 SEGRAVVVVYLPFLRTVSVVVVNPYQNKDLSPSFLERQFREACIALSVEPPTPRNAIVFK 1546
Query: 651 VDYVGSIKDAEELLQRTIVEYKNRHSGPGIAVIECPYVHSMKSGIRALNEFPRVSMPSNA 472
VDYVG +KDAE +LQ TI E +++H GP +AVIECP H MKSGI AL+ FP V +PSNA
Sbjct: 1547 VDYVGHVKDAERILQGTIREVRDKHHGPTLAVIECPNDHLMKSGIPALDNFPCVRIPSNA 1606
Query: 471 NDNQYQAIGWQIVATKKGMQRCAASSQW-SEGISLSRYAHIPLGNFELDWLIHTADMFFA 295
D+QYQ +GWQ A K MQR AASSQW +E I+LSRYAH+PLGNFELDWLI TAD+F +
Sbjct: 1607 RDSQYQVLGWQQAAAKTAMQRSAASSQWLNERITLSRYAHVPLGNFELDWLIFTADVFIS 1666
Query: 294 RALRDHQQVLWISDNGNPDLGGTNEEDSCYTDEVDQPVINQSSPIQ----ELKIHHLPVN 127
RALRD QQ+LWISD+G PDLGG +EE SC+ DEV QP++ + ELKIHHL VN
Sbjct: 1667 RALRDQQQLLWISDDGVPDLGGISEESSCFADEVHQPILTYPGAYRKVSVELKIHHLAVN 1726
Query: 126 ALLKSNQVNEMEGGALFGSEHDSSTGPHDFNEQSGVDEAT 7
ALLKS+QVNEMEGGAL G + D S+G H EQ GVDEAT
Sbjct: 1727 ALLKSSQVNEMEGGALLGFDQDMSSGSH-ICEQYGVDEAT 1765
>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
[Cucumis sativus]
Length = 2051
Score = 335 bits (858), Expect = 1e-89
Identities = 167/283 (59%), Positives = 213/283 (75%), Gaps = 6/283 (2%)
Frame = -1
Query: 831 SEGQAMYAGYFPASGSITISVVNTVQNKEITPYVLERQFRDACQAFSVDASVLRDGIVFK 652
SEG+A++ +FP++ SI + VVN QNK+++ LERQFR+A Q S ++ + GI +K
Sbjct: 1478 SEGRAIFVTFFPSTRSIFVVVVNPYQNKDLSSTFLERQFREASQMLSGESQPPKSGITYK 1537
Query: 651 VDYVGSIKDAEELLQRTIVEYKNRHSGPGIAVIECPYVHSMKSGIRALNEFPRVSMPSNA 472
VDYV +IK+AE +LQR+I E+++ + GP +AVI+CP V +KSG+R L++FP V++PSNA
Sbjct: 1538 VDYVVNIKEAEVILQRSITEHRSLNHGPALAVIQCPSVQRLKSGVRVLDDFPCVTIPSNA 1597
Query: 471 NDNQYQAIGWQIVATKKGMQRCAASSQW-SEGISLSRYAHIPLGNFELDWLIHTADMFFA 295
DNQYQ +GWQ A K GMQRCAASSQW +E ISL+RYAH+PLGNFELDWLI TAD+FF+
Sbjct: 1598 RDNQYQVLGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFS 1657
Query: 294 RALRDHQQVLWISDNGNPDLGGTNEEDSCYTDEVDQPVINQSSPIQ----ELKIHHLPVN 127
RAL D QQVLWISD+G PD+GG N ED C+ DEV QP++ + ELKIHHL VN
Sbjct: 1658 RALHDQQQVLWISDDGVPDIGGINIEDVCFADEVQQPILTYPGAYRKVSVELKIHHLAVN 1717
Query: 126 ALLKSNQVNEMEGGALFGSEHDSSTGPHDFNEQSGVDE-ATCA 1
ALLKSNQVNEMEGG+LFG E D G NE+ G DE A+CA
Sbjct: 1718 ALLKSNQVNEMEGGSLFGFERDIQCGAQFSNEEGGFDEAASCA 1760
>ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
sativus]
Length = 2206
Score = 332 bits (852), Expect = 5e-89
Identities = 166/283 (58%), Positives = 212/283 (74%), Gaps = 6/283 (2%)
Frame = -1
Query: 831 SEGQAMYAGYFPASGSITISVVNTVQNKEITPYVLERQFRDACQAFSVDASVLRDGIVFK 652
SEG+A++ +FP++ SI + VVN QNK+++ LERQFR+A Q S ++ + GI +K
Sbjct: 1478 SEGRAIFVTFFPSTRSIFVVVVNPYQNKDLSSTFLERQFREASQMLSGESQPPKSGITYK 1537
Query: 651 VDYVGSIKDAEELLQRTIVEYKNRHSGPGIAVIECPYVHSMKSGIRALNEFPRVSMPSNA 472
VDYV +IK+AE +LQR+I E+++ + GP +AVI+CP V +KSG+R L++FP V++PSNA
Sbjct: 1538 VDYVVNIKEAEVILQRSITEHRSLNHGPTLAVIQCPSVQRLKSGVRVLDDFPCVTIPSNA 1597
Query: 471 NDNQYQAIGWQIVATKKGMQRCAASSQW-SEGISLSRYAHIPLGNFELDWLIHTADMFFA 295
DNQYQ +GWQ A K GMQRCAASSQW +E ISL+RYAH+PLGNFELDWLI TAD+FF+
Sbjct: 1598 RDNQYQVLGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDWLIFTADIFFS 1657
Query: 294 RALRDHQQVLWISDNGNPDLGGTNEEDSCYTDEVDQPVINQSSPIQ----ELKIHHLPVN 127
RAL D QQVLWISD+G PD+GG N ED C+ DEV QP++ + E KIHHL VN
Sbjct: 1658 RALHDQQQVLWISDDGVPDIGGINIEDVCFADEVQQPILTYPGAYRKVSVEFKIHHLAVN 1717
Query: 126 ALLKSNQVNEMEGGALFGSEHDSSTGPHDFNEQSGVDE-ATCA 1
ALLKSNQVNEMEGG+LFG E D G NE+ G DE A+CA
Sbjct: 1718 ALLKSNQVNEMEGGSLFGFERDIQCGAQFSNEEGGFDEAASCA 1760