BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021026
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   184   7e-45
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   183   1e-44
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         183   1e-44
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   183   1e-44
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   181   6e-44

>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
           copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  184 bits (467), Expect = 7e-45
 Identities = 82/151 (54%), Positives = 111/151 (73%)
 Frame = +2

Query: 2   LFTLDMHTKAHKCLKSVIKNDSWLWHLRFGHLRFSGLKLLSKTKMVDGLPEINEPENLCE 181
           +FTL++ T   KCLK+ IK++SW WH+RFGHL F  LK L + KMV G+P+IN P  LCE
Sbjct: 135 MFTLNIKTNEAKCLKASIKDESWCWHMRFGHLNFGALKSLGEEKMVKGMPQINHPNQLCE 194

Query: 182 ACVKGKQHRQSFPVEKSWRARRPLEIVHTDIAGPFDIASLGGNMYYLTFIDDFSRKSWVY 361
           AC+ GK  R+SFP E + RA+ PL++V+TD+ GP +  S G N Y+L FIDD+SRK+WVY
Sbjct: 195 ACLLGKHARRSFPKEANSRAKEPLQLVYTDVCGPINPPSCGNNKYFLLFIDDYSRKTWVY 254

Query: 362 ILKEKSEALDIYKEFEAMAEKQSGHYLKYTR 454
            LK+KSEA   +K F+A+ EK+SG+ +K  R
Sbjct: 255 FLKQKSEAFVAFKNFKALVEKESGYVIKALR 285


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  183 bits (464), Expect = 1e-44
 Identities = 84/151 (55%), Positives = 109/151 (72%)
 Frame = +2

Query: 2   LFTLDMHTKAHKCLKSVIKNDSWLWHLRFGHLRFSGLKLLSKTKMVDGLPEINEPENLCE 181
           +F L++     +CLK   K +SWLWHLRFGHL F GL+LLS+ +MV GLP IN P  +CE
Sbjct: 444 MFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCE 503

Query: 182 ACVKGKQHRQSFPVEKSWRARRPLEIVHTDIAGPFDIASLGGNMYYLTFIDDFSRKSWVY 361
            C+ GKQ + SFP E S RA++PLE++HTD+ GP    SLG + Y+L FIDDFSRK+WVY
Sbjct: 504 GCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVY 563

Query: 362 ILKEKSEALDIYKEFEAMAEKQSGHYLKYTR 454
            LKEKSE  +I+K+F+A  EK+SG  +K  R
Sbjct: 564 FLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  183 bits (464), Expect = 1e-44
 Identities = 84/151 (55%), Positives = 109/151 (72%)
 Frame = +2

Query: 2   LFTLDMHTKAHKCLKSVIKNDSWLWHLRFGHLRFSGLKLLSKTKMVDGLPEINEPENLCE 181
           +F L++     +CLK   K +SWLWHLRFGHL F GL+LLS+ +MV GLP IN P  +CE
Sbjct: 444 MFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCE 503

Query: 182 ACVKGKQHRQSFPVEKSWRARRPLEIVHTDIAGPFDIASLGGNMYYLTFIDDFSRKSWVY 361
            C+ GKQ + SFP E S RA++PLE++HTD+ GP    SLG + Y+L FIDDFSRK+WVY
Sbjct: 504 GCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVY 563

Query: 362 ILKEKSEALDIYKEFEAMAEKQSGHYLKYTR 454
            LKEKSE  +I+K+F+A  EK+SG  +K  R
Sbjct: 564 FLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  183 bits (464), Expect = 1e-44
 Identities = 84/151 (55%), Positives = 109/151 (72%)
 Frame = +2

Query: 2   LFTLDMHTKAHKCLKSVIKNDSWLWHLRFGHLRFSGLKLLSKTKMVDGLPEINEPENLCE 181
           +F L++     +CLK   K +SWLWHLRFGHL F GL+LLS+ +MV GLP IN P  +CE
Sbjct: 444 MFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCE 503

Query: 182 ACVKGKQHRQSFPVEKSWRARRPLEIVHTDIAGPFDIASLGGNMYYLTFIDDFSRKSWVY 361
            C+ GKQ + SFP E S RA++PLE++HTD+ GP    SLG + Y+L FIDDFSRK+WVY
Sbjct: 504 GCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVY 563

Query: 362 ILKEKSEALDIYKEFEAMAEKQSGHYLKYTR 454
            LKEKSE  +I+K+F+A  EK+SG  +K  R
Sbjct: 564 FLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
           thaliana]
          Length = 1272

 Score =  181 bits (459), Expect = 6e-44
 Identities = 83/151 (54%), Positives = 108/151 (71%)
 Frame = +2

Query: 2   LFTLDMHTKAHKCLKSVIKNDSWLWHLRFGHLRFSGLKLLSKTKMVDGLPEINEPENLCE 181
           +F L++     +CLK   K +SWLWHLRFGHL F GL+LLS+ +MV GLP IN P  +CE
Sbjct: 444 MFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCE 503

Query: 182 ACVKGKQHRQSFPVEKSWRARRPLEIVHTDIAGPFDIASLGGNMYYLTFIDDFSRKSWVY 361
            C+ G Q + SFP E S RA++PLE++HTD+ GP    SLG + Y+L FIDDFSRK+WVY
Sbjct: 504 GCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVY 563

Query: 362 ILKEKSEALDIYKEFEAMAEKQSGHYLKYTR 454
            LKEKSE  +I+K+F+A  EK+SG  +K  R
Sbjct: 564 FLKEKSEVFEIFKKFKAHVEKESGLVIKTMR 594