BLASTX nr result

ID: Cnidium21_contig00021011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021011
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80553.1| hypothetical protein VITISV_024360 [Vitis vinifera]    97   3e-32
gb|ABR16060.1| unknown [Picea sitchensis]                              94   5e-32
ref|XP_002514643.1| RNA binding protein, putative [Ricinus commu...    94   5e-32
ref|XP_002273770.2| PREDICTED: uncharacterized protein LOC100264...    95   1e-31
emb|CBI23570.3| unnamed protein product [Vitis vinifera]               95   1e-31

>emb|CAN80553.1| hypothetical protein VITISV_024360 [Vitis vinifera]
          Length = 524

 Score = 97.1 bits (240), Expect(2) = 3e-32
 Identities = 47/69 (68%), Positives = 54/69 (78%)
 Frame = -1

Query: 438 FMIGNAFVTQYYHIQHTTPALVHRFYQDGSKFGRPEEDGTMSITTTMKGINEKVKSLNYE 259
           F +GNAFV QYYHI H +P LV RFYQD SK GR EE+G M +TTTM+ INEK+ SLNY 
Sbjct: 47  FQVGNAFVHQYYHILHQSPELVFRFYQDISKLGRLEENGIMGVTTTMEAINEKILSLNYG 106

Query: 258 DVKAEIKSV 232
           D+ AEIKSV
Sbjct: 107 DLIAEIKSV 115



 Score = 66.6 bits (161), Expect(2) = 3e-32
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = -3

Query: 166 QHSLHQGVQVFVTGYMTGKDKVERNFAQTFFLAPQDGGGYYVLNDMFRYV 17
           Q S   GV V VTGY+TGKD   R+F Q+FFLAPQD  GY+VLND+FRY+
Sbjct: 118 QESFGGGVLVLVTGYLTGKDNRSRDFTQSFFLAPQD-KGYFVLNDLFRYI 166


>gb|ABR16060.1| unknown [Picea sitchensis]
          Length = 476

 Score = 93.6 bits (231), Expect(2) = 5e-32
 Identities = 43/68 (63%), Positives = 52/68 (76%)
 Frame = -1

Query: 435 MIGNAFVTQYYHIQHTTPALVHRFYQDGSKFGRPEEDGTMSITTTMKGINEKVKSLNYED 256
           ++GNAFV QYYH+ H +P +V RFYQD SK GRPE +G MS TTTM  INEK+ SL+Y D
Sbjct: 17  VVGNAFVHQYYHVLHQSPQMVFRFYQDSSKLGRPEPNGEMSCTTTMTAINEKIISLDYSD 76

Query: 255 VKAEIKSV 232
             AEIK+V
Sbjct: 77  YTAEIKTV 84



 Score = 69.3 bits (168), Expect(2) = 5e-32
 Identities = 34/53 (64%), Positives = 41/53 (77%)
 Frame = -3

Query: 166 QHSLHQGVQVFVTGYMTGKDKVERNFAQTFFLAPQDGGGYYVLNDMFRYVGKP 8
           Q S  QGV V VTG + GKD V+RNF Q+FFLAPQD  GY+VLND+FRY+ +P
Sbjct: 87  QDSYSQGVLVLVTGALNGKDGVKRNFTQSFFLAPQD-KGYFVLNDVFRYLDEP 138


>ref|XP_002514643.1| RNA binding protein, putative [Ricinus communis]
           gi|223546247|gb|EEF47749.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 464

 Score = 94.4 bits (233), Expect(2) = 5e-32
 Identities = 41/66 (62%), Positives = 51/66 (77%)
 Frame = -1

Query: 432 IGNAFVTQYYHIQHTTPALVHRFYQDGSKFGRPEEDGTMSITTTMKGINEKVKSLNYEDV 253
           +GNAFV QYYHI H +P LVH+FYQD S   RP+ DGTM+  TTM+ IN+K+ SLNYED 
Sbjct: 17  VGNAFVEQYYHILHQSPGLVHKFYQDSSLLSRPDADGTMTTVTTMQAINDKILSLNYEDY 76

Query: 252 KAEIKS 235
            AE+K+
Sbjct: 77  TAEVKN 82



 Score = 68.6 bits (166), Expect(2) = 5e-32
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = -3

Query: 166 QHSLHQGVQVFVTGYMTGKDKVERNFAQTFFLAPQDGGGYYVLNDMFRYVGK 11
           Q S  +GV V VTG +TGKD +++ F+QTFFLAPQD  GY+VLND+FR+VG+
Sbjct: 86  QESYEKGVIVLVTGCLTGKDNIKKKFSQTFFLAPQD-KGYFVLNDVFRFVGE 136


>ref|XP_002273770.2| PREDICTED: uncharacterized protein LOC100264206 [Vitis vinifera]
           gi|296084617|emb|CBI25667.3| unnamed protein product
           [Vitis vinifera]
          Length = 466

 Score = 95.1 bits (235), Expect(2) = 1e-31
 Identities = 46/68 (67%), Positives = 54/68 (79%)
 Frame = -1

Query: 435 MIGNAFVTQYYHIQHTTPALVHRFYQDGSKFGRPEEDGTMSITTTMKGINEKVKSLNYED 256
           ++GNAFV QYYHI H +P LV RFYQD SK GR EE+G M +TTTM+ INEK+ SLNY D
Sbjct: 15  VVGNAFVHQYYHILHQSPELVFRFYQDISKLGRLEENGIMGVTTTMEAINEKILSLNYGD 74

Query: 255 VKAEIKSV 232
           + AEIKSV
Sbjct: 75  LIAEIKSV 82



 Score = 66.6 bits (161), Expect(2) = 1e-31
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = -3

Query: 166 QHSLHQGVQVFVTGYMTGKDKVERNFAQTFFLAPQDGGGYYVLNDMFRYV 17
           Q S   GV V VTGY+TGKD   R+F Q+FFLAPQD  GY+VLND+FRY+
Sbjct: 85  QESFGGGVLVLVTGYLTGKDNRSRDFTQSFFLAPQD-KGYFVLNDLFRYI 133


>emb|CBI23570.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score = 95.1 bits (235), Expect(2) = 1e-31
 Identities = 46/68 (67%), Positives = 54/68 (79%)
 Frame = -1

Query: 435 MIGNAFVTQYYHIQHTTPALVHRFYQDGSKFGRPEEDGTMSITTTMKGINEKVKSLNYED 256
           ++GNAFV QYYHI H +P LV RFYQD SK GR EE+G M +TTTM+ INEK+ SLNY D
Sbjct: 15  VVGNAFVHQYYHILHQSPELVFRFYQDISKLGRLEENGIMGVTTTMEAINEKILSLNYGD 74

Query: 255 VKAEIKSV 232
           + AEIKSV
Sbjct: 75  LIAEIKSV 82



 Score = 66.6 bits (161), Expect(2) = 1e-31
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = -3

Query: 166 QHSLHQGVQVFVTGYMTGKDKVERNFAQTFFLAPQDGGGYYVLNDMFRYV 17
           Q S   GV V VTGY+TGKD   R+F Q+FFLAPQD  GY+VLND+FRY+
Sbjct: 85  QESFGGGVLVLVTGYLTGKDNRSRDFTQSFFLAPQD-KGYFVLNDLFRYI 133


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