BLASTX nr result

ID: Cnidium21_contig00021008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021008
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631633.1| PREDICTED: uncharacterized protein LOC100852...   208   1e-51
emb|CAN70933.1| hypothetical protein VITISV_032482 [Vitis vinifera]   208   1e-51
ref|XP_002305420.1| predicted protein [Populus trichocarpa] gi|2...   198   8e-49
ref|XP_004148855.1| PREDICTED: mediator of RNA polymerase II tra...   196   3e-48
ref|XP_003522857.1| PREDICTED: uncharacterized protein LOC100807...   188   8e-46

>ref|XP_003631633.1| PREDICTED: uncharacterized protein LOC100852787 [Vitis vinifera]
          Length = 145

 Score =  208 bits (529), Expect = 1e-51
 Identities = 105/126 (83%), Positives = 109/126 (86%)
 Frame = +2

Query: 2   AAALEAKELSGGQNTAATDAALENFKQRWELFRVACDRAEEFIESVKQRIGSECLVDEAT 181
           A+ LEAKE SG Q TAATDAALENFKQRWELFRVACD+AEEF+ESVKQRIGSECLVDEAT
Sbjct: 20  ASVLEAKESSGAQKTAATDAALENFKQRWELFRVACDQAEEFVESVKQRIGSECLVDEAT 79

Query: 182 GSATAKPGQSAAPGLPPISAVRLEQMSKAVRWLVIELQQGSGTAGSSSLSHPSAPFDARF 361
           GS   KPGQ+   GLPPISAVRLEQMSKAVRWLVIELQ GSGTAG  S SH SAPFDARF
Sbjct: 80  GSVAGKPGQAVTAGLPPISAVRLEQMSKAVRWLVIELQHGSGTAGGPSHSHVSAPFDARF 139

Query: 362 SEDPTQ 379
           SED  Q
Sbjct: 140 SEDAAQ 145


>emb|CAN70933.1| hypothetical protein VITISV_032482 [Vitis vinifera]
          Length = 145

 Score =  208 bits (529), Expect = 1e-51
 Identities = 105/126 (83%), Positives = 109/126 (86%)
 Frame = +2

Query: 2   AAALEAKELSGGQNTAATDAALENFKQRWELFRVACDRAEEFIESVKQRIGSECLVDEAT 181
           A+ LEAKE SG Q TAATDAALENFKQRWELFRVACD+AEEF+ESVKQRIGSECLVDEAT
Sbjct: 20  ASVLEAKESSGAQKTAATDAALENFKQRWELFRVACDQAEEFVESVKQRIGSECLVDEAT 79

Query: 182 GSATAKPGQSAAPGLPPISAVRLEQMSKAVRWLVIELQQGSGTAGSSSLSHPSAPFDARF 361
           GS   KPGQ+   GLPPISAVRLEQMSKAVRWLVIELQ GSGTAG  S SH SAPFDARF
Sbjct: 80  GSVAGKPGQAVTTGLPPISAVRLEQMSKAVRWLVIELQHGSGTAGGPSHSHVSAPFDARF 139

Query: 362 SEDPTQ 379
           SED  Q
Sbjct: 140 SEDAAQ 145


>ref|XP_002305420.1| predicted protein [Populus trichocarpa] gi|222848384|gb|EEE85931.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  198 bits (504), Expect = 8e-49
 Identities = 99/127 (77%), Positives = 109/127 (85%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   AAALEAKELSGGQNTAATDAALENFKQRWELFRVACDRAEEFIESVKQRIGSECLVDEAT 181
           A  LEAKELSGGQ TAATD ALENFKQ+WELFRV+CD+AEEF+ESVKQR+GSECLVDEAT
Sbjct: 20  ANVLEAKELSGGQKTAATDVALENFKQKWELFRVSCDQAEEFVESVKQRVGSECLVDEAT 79

Query: 182 GSATAKPGQSAAPGLPPISAVRLEQMSKAVRWLVIELQQGSGTA-GSSSLSHPSAPFDAR 358
           GS + + GQ    GLPPISAVRLEQMSKAVRWLVIELQ GSG A G++  +HPSAPFDAR
Sbjct: 80  GSVSGRSGQGGVTGLPPISAVRLEQMSKAVRWLVIELQHGSGAAGGAAGHAHPSAPFDAR 139

Query: 359 FSEDPTQ 379
           FSED  Q
Sbjct: 140 FSEDAAQ 146


>ref|XP_004148855.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           32-like [Cucumis sativus]
           gi|449515353|ref|XP_004164714.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 32-like [Cucumis
           sativus]
          Length = 146

 Score =  196 bits (499), Expect = 3e-48
 Identities = 102/127 (80%), Positives = 107/127 (84%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   AAALEAKELSGGQNTAATDAALENFKQRWELFRVACDRAEEFIESVKQRIGSECLVDEAT 181
           A  LEA E SG Q TAATDAALENFKQ+WELFRVACD+AEEF+ESVKQRIGSECLVDEAT
Sbjct: 20  ANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEAT 79

Query: 182 GSATAKPGQSAAPGLPPISAVRLEQMSKAVRWLVIELQQGSGTAGSSSL-SHPSAPFDAR 358
           GS   K GQSA   LPPISAVRLEQMSKAVRWLVIELQ GSG A S+S  SH SAPFDAR
Sbjct: 80  GSLAGKSGQSATTSLPPISAVRLEQMSKAVRWLVIELQHGSGAAASASAHSHQSAPFDAR 139

Query: 359 FSEDPTQ 379
           F+ED TQ
Sbjct: 140 FTEDATQ 146


>ref|XP_003522857.1| PREDICTED: uncharacterized protein LOC100807018 isoform 1 [Glycine
           max] gi|356508222|ref|XP_003522858.1| PREDICTED:
           uncharacterized protein LOC100807018 isoform 2 [Glycine
           max] gi|356508224|ref|XP_003522859.1| PREDICTED:
           uncharacterized protein LOC100807018 isoform 3 [Glycine
           max]
          Length = 146

 Score =  188 bits (478), Expect = 8e-46
 Identities = 96/127 (75%), Positives = 105/127 (82%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   AAALEAKELSGGQNTAATDAALENFKQRWELFRVACDRAEEFIESVKQRIGSECLVDEAT 181
           A  LEAKE +G   T ATD ALENFKQ+WELFRVACD+AEEF+ESVKQRIGSECLVDEAT
Sbjct: 20  ANVLEAKENAGSIKTMATDTALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEAT 79

Query: 182 GSATAKPGQSAAPGLPPISAVRLEQMSKAVRWLVIELQQGSGT-AGSSSLSHPSAPFDAR 358
                KPGQ+   GLPPISAVRLEQMSKAVRWLVIELQ GSG  + +S+L+HPSAPFDAR
Sbjct: 80  RPVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQHGSGAGSANSALTHPSAPFDAR 139

Query: 359 FSEDPTQ 379
           FSED  Q
Sbjct: 140 FSEDAAQ 146


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