BLASTX nr result

ID: Cnidium21_contig00021007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00021007
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48013.1| unknown [Lotus japonicus]                              248   2e-63
gb|AFK35931.1| unknown [Lotus japonicus]                              244   4e-62
ref|XP_003634407.1| PREDICTED: thylakoidal processing peptidase ...   242   1e-61
ref|NP_001237875.1| uncharacterized protein LOC100306121 [Glycin...   239   7e-61
emb|CBI18980.3| unnamed protein product [Vitis vinifera]              215   1e-53

>gb|AFK48013.1| unknown [Lotus japonicus]
          Length = 193

 Score =  248 bits (634), Expect = 2e-63
 Identities = 115/190 (60%), Positives = 145/190 (76%), Gaps = 3/190 (1%)
 Frame = +3

Query: 96  MSFLRPSALYQLLITLNSLKWMPCM---FFGYPNFQGIIRLVIMFLLWSTLTEMCHISSS 266
           MSFLRPSALY  LIT +SL+WMPC    F  +P   G +RL+++ LLWST +E+  I SS
Sbjct: 1   MSFLRPSALYHFLITYSSLRWMPCQSSGFLRWPGLDGFLRLLVVGLLWSTFSELRSIPSS 60

Query: 267 SMSPTLRVGDRIFVEKVSYFFRRPALHDIVTFRAPLDQPGFREGDILIKRIVARAGDLVE 446
           SM PTLRV DRI VEK SY+FR PA+H+IVTFR P    G     + IKR+VA+ GD VE
Sbjct: 61  SMFPTLRVADRIIVEKASYYFRSPAIHEIVTFRDPTQLSGDNPDVVFIKRVVAKEGDTVE 120

Query: 447 VRGGQLYVNMLAKKEDFVTEKPIYAIQPTYVPRGHVYVLGDNRNNSCDSHIWGPLPIKNI 626
           V  G+LY+N +A++EDF+ E+P Y ++ TYVP+GHVYVLGDNRNNS DSH+WGPLP+KNI
Sbjct: 121 VHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKGHVYVLGDNRNNSYDSHVWGPLPVKNI 180

Query: 627 VGRYAICFYR 656
           +GRY +CF+R
Sbjct: 181 IGRYVMCFHR 190


>gb|AFK35931.1| unknown [Lotus japonicus]
          Length = 193

 Score =  244 bits (622), Expect = 4e-62
 Identities = 113/190 (59%), Positives = 145/190 (76%), Gaps = 3/190 (1%)
 Frame = +3

Query: 96  MSFLRPSALYQLLITLNSLKWMPCMFFGYPNFQGI---IRLVIMFLLWSTLTEMCHISSS 266
           MSFLRPSALY  LIT +SL+WMPC   G+  + G+   +RL+++ LLWST +E+  I SS
Sbjct: 1   MSFLRPSALYHFLITYSSLRWMPCQSSGFLRWSGLDGFLRLLVVGLLWSTFSELRSIPSS 60

Query: 267 SMSPTLRVGDRIFVEKVSYFFRRPALHDIVTFRAPLDQPGFREGDILIKRIVARAGDLVE 446
           SM PTLRV DRI VEK SY+FR P +H+IVTFR P    G     + IKR+VA+ GD VE
Sbjct: 61  SMFPTLRVADRIIVEKASYYFRSPTIHEIVTFRDPTQLSGDNPDVVFIKRVVAKEGDTVE 120

Query: 447 VRGGQLYVNMLAKKEDFVTEKPIYAIQPTYVPRGHVYVLGDNRNNSCDSHIWGPLPIKNI 626
           V  G+LY+N +A++EDF+ E+P Y ++ TYVP+GHVYVLGDNRNNS DSH+WGPLP+KNI
Sbjct: 121 VHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKGHVYVLGDNRNNSYDSHVWGPLPVKNI 180

Query: 627 VGRYAICFYR 656
           +GRY +CF+R
Sbjct: 181 IGRYVMCFHR 190


>ref|XP_003634407.1| PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like
           [Vitis vinifera]
          Length = 194

 Score =  242 bits (617), Expect = 1e-61
 Identities = 117/190 (61%), Positives = 143/190 (75%), Gaps = 3/190 (1%)
 Frame = +3

Query: 96  MSFLRPSALYQLLITLNSLKWMPCM---FFGYPNFQGIIRLVIMFLLWSTLTEMCHISSS 266
           MSFLRPS LYQLL   + L+WMPC    F  +P F G++R +++ LLWST TE+  I SS
Sbjct: 1   MSFLRPSVLYQLLFMHSWLQWMPCQSWEFLRWPGFDGLLRCLVVVLLWSTFTEISFIRSS 60

Query: 267 SMSPTLRVGDRIFVEKVSYFFRRPALHDIVTFRAPLDQPGFREGDILIKRIVARAGDLVE 446
           SM PTL V DR+ +E+VSY+FRRPA+H+IVTFRAP+  PG  E +I IKR+VARAGDLVE
Sbjct: 61  SMYPTLHVQDRVLMERVSYYFRRPAIHEIVTFRAPVRLPGHSEDEIFIKRVVARAGDLVE 120

Query: 447 VRGGQLYVNMLAKKEDFVTEKPIYAIQPTYVPRGHVYVLGDNRNNSCDSHIWGPLPIKNI 626
           VR G LYVN   + EDF+ E+P Y +  TYVP+ HV+VLGDNRNNS DSH WGPLPIKNI
Sbjct: 121 VRDGSLYVNGDVQTEDFILEQPNYILDLTYVPKDHVFVLGDNRNNSSDSHEWGPLPIKNI 180

Query: 627 VGRYAICFYR 656
           +GR+    YR
Sbjct: 181 IGRFVTHVYR 190


>ref|NP_001237875.1| uncharacterized protein LOC100306121 [Glycine max]
           gi|255627617|gb|ACU14153.1| unknown [Glycine max]
          Length = 194

 Score =  239 bits (611), Expect = 7e-61
 Identities = 114/190 (60%), Positives = 140/190 (73%), Gaps = 3/190 (1%)
 Frame = +3

Query: 96  MSFLRPSALYQLLITLNSLKWMPCMFFGY---PNFQGIIRLVIMFLLWSTLTEMCHISSS 266
           MSFLRPSALY  LI+  +L+W+ C  +G+   P   G  RL ++ LLWSTL+E+  I SS
Sbjct: 1   MSFLRPSALYNFLISYPALRWLSCQSWGFLRWPGLDGFFRLFVVVLLWSTLSELRFIPSS 60

Query: 267 SMSPTLRVGDRIFVEKVSYFFRRPALHDIVTFRAPLDQPGFREGDILIKRIVARAGDLVE 446
           SM PTLRVGDRI VEK SY+ R PA+HDIVTF+ P    G     + IKRIVA+AGD VE
Sbjct: 61  SMYPTLRVGDRIIVEKASYYIRSPAIHDIVTFKDPTQSSGENTDAVFIKRIVAKAGDTVE 120

Query: 447 VRGGQLYVNMLAKKEDFVTEKPIYAIQPTYVPRGHVYVLGDNRNNSCDSHIWGPLPIKNI 626
           V  G LY+N +A++EDF+ E P YA+Q  +VP GHVYVLGDNRNNS DSH+WGPLP+KNI
Sbjct: 121 VNHGALYINGVAQQEDFIAEPPAYAMQLAHVPNGHVYVLGDNRNNSYDSHVWGPLPVKNI 180

Query: 627 VGRYAICFYR 656
           VGRY  C++R
Sbjct: 181 VGRYVTCYHR 190


>emb|CBI18980.3| unnamed protein product [Vitis vinifera]
          Length = 173

 Score =  215 bits (548), Expect = 1e-53
 Identities = 103/169 (60%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
 Frame = +3

Query: 159 MPCM---FFGYPNFQGIIRLVIMFLLWSTLTEMCHISSSSMSPTLRVGDRIFVEKVSYFF 329
           MPC    F  +P F G++R +++ LLWST TE+  I SSSM PTL V DR+ +E+VSY+F
Sbjct: 1   MPCQSWEFLRWPGFDGLLRCLVVVLLWSTFTEISFIRSSSMYPTLHVQDRVLMERVSYYF 60

Query: 330 RRPALHDIVTFRAPLDQPGFREGDILIKRIVARAGDLVEVRGGQLYVNMLAKKEDFVTEK 509
           RRPA+H+IVTFRAP+  PG  E +I IKR+VARAGDLVEVR G LYVN   + EDF+ E+
Sbjct: 61  RRPAIHEIVTFRAPVRLPGHSEDEIFIKRVVARAGDLVEVRDGSLYVNGDVQTEDFILEQ 120

Query: 510 PIYAIQPTYVPRGHVYVLGDNRNNSCDSHIWGPLPIKNIVGRYAICFYR 656
           P Y +  TYVP+ HV+VLGDNRNNS DSH WGPLPIKNI+GR+    YR
Sbjct: 121 PNYILDLTYVPKDHVFVLGDNRNNSSDSHEWGPLPIKNIIGRFVTHVYR 169


Top