BLASTX nr result

ID: Cnidium21_contig00020986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020986
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513735.1| conserved hypothetical protein [Ricinus comm...    72   5e-11
ref|XP_002299770.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002314255.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|NP_680195.2| uncharacterized protein [Arabidopsis thaliana] ...    60   2e-07
dbj|BAC42736.1| unknown protein [Arabidopsis thaliana]                 60   2e-07

>ref|XP_002513735.1| conserved hypothetical protein [Ricinus communis]
           gi|223547186|gb|EEF48682.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 542

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
 Frame = +3

Query: 21  KKSNQSPKQDDVWSSIVSQKKIEE---LPPPYVHHLVXXXXXXXXXXXXEICTEGLGSET 191
           KK  ++P Q D+WSSI++QK  E+   LPPPYVH LV            EICTE LGSE 
Sbjct: 114 KKDQENPGQFDIWSSILTQKAQEDTKTLPPPYVHPLVKRSASSLSEKSLEICTESLGSEN 173

Query: 192 GSDKFTLCEPLETG 233
           GSD F+   P ETG
Sbjct: 174 GSDGFSSYPPSETG 187


>ref|XP_002299770.1| predicted protein [Populus trichocarpa] gi|222847028|gb|EEE84575.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/78 (50%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = +3

Query: 6   EEFYGKKSNQSPKQDDVWSSIVSQKKIEELP--PPYVHHLVXXXXXXXXXXXXEICTEGL 179
           +E   KK  + P Q DVWSSI+SQK  E+     PYVH LV            EICTE L
Sbjct: 94  QEDKNKKEVEKPGQFDVWSSILSQKTKEDSKNVQPYVHPLVKRSASSLSKKSLEICTESL 153

Query: 180 GSETGSDKFTLCEPLETG 233
           GSETGSD F+   P ETG
Sbjct: 154 GSETGSDGFSSYPPSETG 171


>ref|XP_002314255.1| predicted protein [Populus trichocarpa] gi|222850663|gb|EEE88210.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/78 (47%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
 Frame = +3

Query: 6   EEFYGKKSNQSPKQDDVWSSIVSQKKIEELPP--PYVHHLVXXXXXXXXXXXXEICTEGL 179
           +E   KK  + P Q DVWSSI+SQK  E+     PYVH LV            EICTE L
Sbjct: 113 QEDKNKKEVEKPGQFDVWSSILSQKAKEDSKDVQPYVHPLVKRSASSLSEKSLEICTESL 172

Query: 180 GSETGSDKFTLCEPLETG 233
           GSETG D F+   P E G
Sbjct: 173 GSETGCDGFSSYPPSEIG 190


>ref|NP_680195.2| uncharacterized protein [Arabidopsis thaliana]
           gi|334187828|ref|NP_001190360.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|122175037|sp|Q0V865.1|FAFL_ARATH RecName:
           Full=Protein FAF-like, chloroplastic; Flags: Precursor
           gi|111074178|gb|ABH04462.1| At5g22090 [Arabidopsis
           thaliana] gi|332005598|gb|AED92981.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332005599|gb|AED92982.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 463

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
 Frame = +3

Query: 21  KKSNQSPKQDDVWSSIVSQKKIEE-----LPPPYVHHLVXXXXXXXXXXXXEICTEGLGS 185
           K+    P Q DVWSSI+S+KK  E     +PPPYVH L+            EICTE LGS
Sbjct: 100 KEEEIEPGQSDVWSSILSEKKKTESSKDTVPPPYVHPLMKRASSLSEKSL-EICTESLGS 158

Query: 186 ETGSDKFTLCEPLETG 233
           ETG D F+     ETG
Sbjct: 159 ETGCDGFSSHASSETG 174


>dbj|BAC42736.1| unknown protein [Arabidopsis thaliana]
          Length = 463

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
 Frame = +3

Query: 21  KKSNQSPKQDDVWSSIVSQKKIEE-----LPPPYVHHLVXXXXXXXXXXXXEICTEGLGS 185
           K+    P Q DVWSSI+S+KK  E     +PPPYVH L+            EICTE LGS
Sbjct: 100 KEEEIEPGQSDVWSSILSEKKKTESSKDTVPPPYVHPLMKRASSLSEKSL-EICTESLGS 158

Query: 186 ETGSDKFTLCEPLETG 233
           ETG D F+     ETG
Sbjct: 159 ETGCDGFSSHASSETG 174


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