BLASTX nr result

ID: Cnidium21_contig00020970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020970
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]   102   9e-20
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...   101   3e-19
ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S...    84   1e-14
dbj|BAA06810.1| ORF74 [Oryza sativa Japonica Group]                    68   3e-09
ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm...    66   1e-08

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score =  102 bits (255), Expect = 9e-20
 Identities = 53/72 (73%), Positives = 55/72 (76%), Gaps = 5/72 (6%)
 Frame = -2

Query: 748 LDSRILCFLGGGEQCCLRCGRCPPVGPGLLPARKNRSLASRTSGALSGDILK-----TIR 584
           LDSRI CF GGGEQC LRCGRCPPVGPGLLPARKNRSLASRTSG   G I +       R
Sbjct: 52  LDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARKNRSLASRTSG---GPIRRHTENHAFR 108

Query: 583 TERNTRLPNKKE 548
           TERN RLP KK+
Sbjct: 109 TERNARLPKKKK 120



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -2

Query: 91  PRQELPGDDKGSNPPAVAGRLFSFTIRPGR 2
           PRQELPGDD+G+NPPAVAGRLF FTIRPGR
Sbjct: 141 PRQELPGDDRGTNPPAVAGRLFCFTIRPGR 170


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score =  101 bits (251), Expect = 3e-19
 Identities = 56/98 (57%), Positives = 58/98 (59%)
 Frame = +3

Query: 618 PLVRLASERFFRAGSKPGPTGGHLPQRKQHCSPPPKKQRIRESRLKIHA*IVV**QGRRR 797
           PLVRLASERFFRA S PGPTGGHLPQRK HCSPPP KQ+IRES                 
Sbjct: 275 PLVRLASERFFRARSGPGPTGGHLPQRKLHCSPPPDKQKIRES----------------- 317

Query: 798 KLGTEPYDAKVSRTVP*EGSGYLLELRPTTTGQFRFGA 911
                              SGYLLELRPTTTG+FRFGA
Sbjct: 318 -------------------SGYLLELRPTTTGKFRFGA 336


>ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor]
           gi|241931727|gb|EES04872.1| hypothetical protein
           SORBIDRAFT_04g009491 [Sorghum bicolor]
          Length = 289

 Score = 84.0 bits (206), Expect(2) = 1e-14
 Identities = 38/56 (67%), Positives = 43/56 (76%)
 Frame = -2

Query: 766 YACIFSLDSRILCFLGGGEQCCLRCGRCPPVGPGLLPARKNRSLASRTSGALSGDI 599
           YAC+F LDSRI CF GGGEQC LRCGRCPPVGPGLLPAR+      R +G + GD+
Sbjct: 239 YACLFRLDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARR------RLAGLVVGDL 288



 Score = 22.3 bits (46), Expect(2) = 1e-14
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 785 LSLDHYLCMY 756
           LSLDHY C++
Sbjct: 234 LSLDHYACLF 243


>dbj|BAA06810.1| ORF74 [Oryza sativa Japonica Group]
          Length = 74

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 39/52 (75%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
 Frame = +2

Query: 614 GPT-SPAS**AVLSGGKQAGPYGRASPATQAALFATTQEAKDSRIQAENTCI 766
           GPT SPAS   +LSG KQAGP GRASPATQAA FATT+EAKDSR++AE T I
Sbjct: 24  GPTTSPAS---LLSGRKQAGPDGRASPATQAAWFATTREAKDSRVKAEKTSI 72


>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
           gi|223542494|gb|EEF44034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 39/72 (54%), Positives = 44/72 (61%)
 Frame = -2

Query: 217 PHFL*KGPKKCLHLLPTVFLRNSY*TGRSSPPFVLATSPKVPPRQELPGDDKGSNPPAVA 38
           PHFL K PKK LHLLPTVFL+N        P FVLAT PKV   + +P   + + P    
Sbjct: 20  PHFLLKRPKKGLHLLPTVFLQNLIERVDPPPHFVLATYPKVSSLR-VPRRRQKNQPVCCG 78

Query: 37  GRLFSFTIRPGR 2
           G LF FTIRPGR
Sbjct: 79  GALFFFTIRPGR 90


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