BLASTX nr result
ID: Cnidium21_contig00020970
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00020970 (911 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera] 102 9e-20 ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica... 101 3e-19 ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S... 84 1e-14 dbj|BAA06810.1| ORF74 [Oryza sativa Japonica Group] 68 3e-09 ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm... 66 1e-08 >emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera] Length = 280 Score = 102 bits (255), Expect = 9e-20 Identities = 53/72 (73%), Positives = 55/72 (76%), Gaps = 5/72 (6%) Frame = -2 Query: 748 LDSRILCFLGGGEQCCLRCGRCPPVGPGLLPARKNRSLASRTSGALSGDILK-----TIR 584 LDSRI CF GGGEQC LRCGRCPPVGPGLLPARKNRSLASRTSG G I + R Sbjct: 52 LDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARKNRSLASRTSG---GPIRRHTENHAFR 108 Query: 583 TERNTRLPNKKE 548 TERN RLP KK+ Sbjct: 109 TERNARLPKKKK 120 Score = 62.4 bits (150), Expect = 1e-07 Identities = 27/30 (90%), Positives = 29/30 (96%) Frame = -2 Query: 91 PRQELPGDDKGSNPPAVAGRLFSFTIRPGR 2 PRQELPGDD+G+NPPAVAGRLF FTIRPGR Sbjct: 141 PRQELPGDDRGTNPPAVAGRLFCFTIRPGR 170 >ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula] gi|355477316|gb|AES58519.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula] Length = 556 Score = 101 bits (251), Expect = 3e-19 Identities = 56/98 (57%), Positives = 58/98 (59%) Frame = +3 Query: 618 PLVRLASERFFRAGSKPGPTGGHLPQRKQHCSPPPKKQRIRESRLKIHA*IVV**QGRRR 797 PLVRLASERFFRA S PGPTGGHLPQRK HCSPPP KQ+IRES Sbjct: 275 PLVRLASERFFRARSGPGPTGGHLPQRKLHCSPPPDKQKIRES----------------- 317 Query: 798 KLGTEPYDAKVSRTVP*EGSGYLLELRPTTTGQFRFGA 911 SGYLLELRPTTTG+FRFGA Sbjct: 318 -------------------SGYLLELRPTTTGKFRFGA 336 >ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor] gi|241931727|gb|EES04872.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor] Length = 289 Score = 84.0 bits (206), Expect(2) = 1e-14 Identities = 38/56 (67%), Positives = 43/56 (76%) Frame = -2 Query: 766 YACIFSLDSRILCFLGGGEQCCLRCGRCPPVGPGLLPARKNRSLASRTSGALSGDI 599 YAC+F LDSRI CF GGGEQC LRCGRCPPVGPGLLPAR+ R +G + GD+ Sbjct: 239 YACLFRLDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARR------RLAGLVVGDL 288 Score = 22.3 bits (46), Expect(2) = 1e-14 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -1 Query: 785 LSLDHYLCMY 756 LSLDHY C++ Sbjct: 234 LSLDHYACLF 243 >dbj|BAA06810.1| ORF74 [Oryza sativa Japonica Group] Length = 74 Score = 68.2 bits (165), Expect = 3e-09 Identities = 39/52 (75%), Positives = 43/52 (82%), Gaps = 1/52 (1%) Frame = +2 Query: 614 GPT-SPAS**AVLSGGKQAGPYGRASPATQAALFATTQEAKDSRIQAENTCI 766 GPT SPAS +LSG KQAGP GRASPATQAA FATT+EAKDSR++AE T I Sbjct: 24 GPTTSPAS---LLSGRKQAGPDGRASPATQAAWFATTREAKDSRVKAEKTSI 72 >ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis] gi|223542494|gb|EEF44034.1| conserved hypothetical protein [Ricinus communis] Length = 431 Score = 66.2 bits (160), Expect = 1e-08 Identities = 39/72 (54%), Positives = 44/72 (61%) Frame = -2 Query: 217 PHFL*KGPKKCLHLLPTVFLRNSY*TGRSSPPFVLATSPKVPPRQELPGDDKGSNPPAVA 38 PHFL K PKK LHLLPTVFL+N P FVLAT PKV + +P + + P Sbjct: 20 PHFLLKRPKKGLHLLPTVFLQNLIERVDPPPHFVLATYPKVSSLR-VPRRRQKNQPVCCG 78 Query: 37 GRLFSFTIRPGR 2 G LF FTIRPGR Sbjct: 79 GALFFFTIRPGR 90