BLASTX nr result

ID: Cnidium21_contig00020932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020932
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566396.1| NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]...    99   3e-19
ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
gb|AAO41900.1| putative VAMP protein SEC22 [Arabidopsis thaliana]      99   5e-19
gb|AFK48051.1| unknown [Medicago truncatula]                           94   1e-17
gb|ABY88583.1| NHL1, partial [Arabidopsis thaliana]                    94   1e-17

>ref|NP_566396.1| NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]
           gi|6041819|gb|AAF02134.1|AC009918_6 unknown protein
           [Arabidopsis thaliana]
           gi|9502172|gb|AAF88021.1|AF264697_1 NDR1/HIN1-Like
           protein 1 [Arabidopsis thaliana]
           gi|21595601|gb|AAM66116.1| harpin-induced protein-like
           [Arabidopsis thaliana] gi|56381911|gb|AAV85674.1|
           At3g11660 [Arabidopsis thaliana]
           gi|58331799|gb|AAW70397.1| At3g11660 [Arabidopsis
           thaliana] gi|332641559|gb|AEE75080.1| NDR1/HIN1-Like
           protein 1 [Arabidopsis thaliana]
          Length = 209

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
 Frame = +1

Query: 4   CSHHKDRRKKILKRVFGTXXXXXXXXXXXXXXXXXXXQPKKPRFILQDATIYAFNVT-SV 180
           C +H   R+K+++R+F +                   QP KPRFILQDAT+YAFNV+ + 
Sbjct: 4   CENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNP 63

Query: 181 PNLLTSNFQVTVNSRNPNSKIGIFYDKLDIF 273
           PNLLTSNFQ+T++SRNPN+KIGI+YD+LD++
Sbjct: 64  PNLLTSNFQITLSSRNPNNKIGIYYDRLDVY 94


>ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|222867424|gb|EEF04555.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/90 (52%), Positives = 61/90 (67%)
 Frame = +1

Query: 4   CSHHKDRRKKILKRVFGTXXXXXXXXXXXXXXXXXXXQPKKPRFILQDATIYAFNVTSVP 183
           C  H  RR+KI +R+F                     +P KP+FILQDAT+YAFNV+S P
Sbjct: 6   CGSHGHRRRKIFRRIFAGILIFLLIVLIIILLVWAILRPSKPKFILQDATVYAFNVSS-P 64

Query: 184 NLLTSNFQVTVNSRNPNSKIGIFYDKLDIF 273
           N+LTSNFQVT++SRNPN K+GI+YDKLD++
Sbjct: 65  NVLTSNFQVTLSSRNPNDKVGIYYDKLDVY 94


>gb|AAO41900.1| putative VAMP protein SEC22 [Arabidopsis thaliana]
          Length = 209

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/91 (49%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
 Frame = +1

Query: 4   CSHHKDRRKKILKRVFGTXXXXXXXXXXXXXXXXXXXQPKKPRFILQDATIYAFNVT-SV 180
           C +H   R+K+++R+F +                   QP KPRFILQDAT+YAFNV+ + 
Sbjct: 4   CENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNP 63

Query: 181 PNLLTSNFQVTVNSRNPNSKIGIFYDKLDIF 273
           PN+LTSNFQ+T++SRNPN+KIGI+YD+LD++
Sbjct: 64  PNILTSNFQITLSSRNPNNKIGIYYDRLDVY 94


>gb|AFK48051.1| unknown [Medicago truncatula]
          Length = 210

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/91 (49%), Positives = 58/91 (63%)
 Frame = +1

Query: 1   QCSHHKDRRKKILKRVFGTXXXXXXXXXXXXXXXXXXXQPKKPRFILQDATIYAFNVTSV 180
           +C+HHK ++ K  +++F                     +P KP FILQD T+YAFN T V
Sbjct: 5   ECNHHKGKKHKRFRKIFWGIIIFLFIVLVTILIIWAVLKPSKPSFILQDVTVYAFNAT-V 63

Query: 181 PNLLTSNFQVTVNSRNPNSKIGIFYDKLDIF 273
           PN LTSNFQVTV+SRNPN KIGI+YD+LD +
Sbjct: 64  PNFLTSNFQVTVSSRNPNDKIGIYYDRLDSY 94


>gb|ABY88583.1| NHL1, partial [Arabidopsis thaliana]
          Length = 181

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/84 (52%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = +1

Query: 25  RKKILKRVFGTXXXXXXXXXXXXXXXXXXXQPKKPRFILQDATIYAFNVT-SVPNLLTSN 201
           R+K+++R+F +                   QP KPRFILQDAT+YAFNV+ + PNLLTSN
Sbjct: 4   RRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSN 63

Query: 202 FQVTVNSRNPNSKIGIFYDKLDIF 273
           FQ+T++SRNPN+KIGI+YD+LD++
Sbjct: 64  FQITLSSRNPNNKIGIYYDRLDVY 87


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