BLASTX nr result

ID: Cnidium21_contig00020926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020926
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB29957.1| unknown [Solanum tuberosum]                            189   2e-46
ref|XP_004145906.1| PREDICTED: 60S ribosomal protein L9-like [Cu...   184   5e-45
gb|ADN33776.1| 60S ribosomal protein l9 [Cucumis melo subsp. melo]    184   5e-45
ref|XP_004173367.1| PREDICTED: 60S ribosomal protein L9-like, pa...   180   9e-44
ref|XP_004137145.1| PREDICTED: 60S ribosomal protein L9-like [Cu...   180   9e-44

>gb|ABB29957.1| unknown [Solanum tuberosum]
          Length = 194

 Score =  189 bits (481), Expect = 2e-46
 Identities = 98/121 (80%), Positives = 99/121 (81%)
 Frame = -1

Query: 365 TILSSETMDIPXXXXXXXXXXXXXXXGPRGKLVRNFKHLNLDFQLITDETTGQKKLKVDA 186
           TILSSETMDIP               GPRGKLVRNFKHLNLDFQLI DE TGQKKLKVDA
Sbjct: 3   TILSSETMDIPDGISIKVKAKQIEVEGPRGKLVRNFKHLNLDFQLIKDEETGQKKLKVDA 62

Query: 185 WFGSRKTTAAIRTALSHVNNLIVGVTKGYRYKMRFVYAHFPINASIGGAGNAIEIRNFLG 6
           WFGSRK TA+IRTALSHVNNLIVGVTKGYRYKMRFVYAHFPINASI G   AIEIRNFLG
Sbjct: 63  WFGSRKATASIRTALSHVNNLIVGVTKGYRYKMRFVYAHFPINASITGGNKAIEIRNFLG 122

Query: 5   E 3
           E
Sbjct: 123 E 123


>ref|XP_004145906.1| PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus]
           gi|449497261|ref|XP_004160355.1| PREDICTED: 60S
           ribosomal protein L9-like [Cucumis sativus]
          Length = 194

 Score =  184 bits (468), Expect = 5e-45
 Identities = 94/121 (77%), Positives = 98/121 (80%)
 Frame = -1

Query: 365 TILSSETMDIPXXXXXXXXXXXXXXXGPRGKLVRNFKHLNLDFQLITDETTGQKKLKVDA 186
           TILSSETMDIP               GPRGKLVRNFKHLNLDFQLITDE TG+KKLK+DA
Sbjct: 3   TILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKIDA 62

Query: 185 WFGSRKTTAAIRTALSHVNNLIVGVTKGYRYKMRFVYAHFPINASIGGAGNAIEIRNFLG 6
           WFGSRKT+AAIRTALSHV NLI GVTKGYRYKMRFVYAHFPINASI     +IEIRNFLG
Sbjct: 63  WFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNFLG 122

Query: 5   E 3
           E
Sbjct: 123 E 123


>gb|ADN33776.1| 60S ribosomal protein l9 [Cucumis melo subsp. melo]
          Length = 194

 Score =  184 bits (468), Expect = 5e-45
 Identities = 94/121 (77%), Positives = 99/121 (81%)
 Frame = -1

Query: 365 TILSSETMDIPXXXXXXXXXXXXXXXGPRGKLVRNFKHLNLDFQLITDETTGQKKLKVDA 186
           TILSSETMDIP               GPRGKLVRNFKHLNLDFQLITDE TG+KKLK+DA
Sbjct: 3   TILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKIDA 62

Query: 185 WFGSRKTTAAIRTALSHVNNLIVGVTKGYRYKMRFVYAHFPINASIGGAGNAIEIRNFLG 6
           WFGSRKT+AAIRTALSHV NLI GVTKGYRYKMRFVYAHFPINASI  +  +IEIRNFLG
Sbjct: 63  WFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNFLG 122

Query: 5   E 3
           E
Sbjct: 123 E 123


>ref|XP_004173367.1| PREDICTED: 60S ribosomal protein L9-like, partial [Cucumis sativus]
          Length = 125

 Score =  180 bits (457), Expect = 9e-44
 Identities = 91/121 (75%), Positives = 98/121 (80%)
 Frame = -1

Query: 365 TILSSETMDIPXXXXXXXXXXXXXXXGPRGKLVRNFKHLNLDFQLITDETTGQKKLKVDA 186
           TILSSE+MDIP               GPRGKLVRNFKHLNLDFQLITD+ TG+KKL+++A
Sbjct: 3   TILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRIEA 62

Query: 185 WFGSRKTTAAIRTALSHVNNLIVGVTKGYRYKMRFVYAHFPINASIGGAGNAIEIRNFLG 6
           WFGSRKT+AAIRTALSHV NLI GVTKGYRYKMRFVYAHFPINASI     AIEIRNFLG
Sbjct: 63  WFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNFLG 122

Query: 5   E 3
           E
Sbjct: 123 E 123


>ref|XP_004137145.1| PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus]
          Length = 195

 Score =  180 bits (457), Expect = 9e-44
 Identities = 91/121 (75%), Positives = 98/121 (80%)
 Frame = -1

Query: 365 TILSSETMDIPXXXXXXXXXXXXXXXGPRGKLVRNFKHLNLDFQLITDETTGQKKLKVDA 186
           TILSSE+MDIP               GPRGKLVRNFKHLNLDFQLITD+ TG+KKL+++A
Sbjct: 3   TILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRIEA 62

Query: 185 WFGSRKTTAAIRTALSHVNNLIVGVTKGYRYKMRFVYAHFPINASIGGAGNAIEIRNFLG 6
           WFGSRKT+AAIRTALSHV NLI GVTKGYRYKMRFVYAHFPINASI     AIEIRNFLG
Sbjct: 63  WFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNFLG 122

Query: 5   E 3
           E
Sbjct: 123 E 123


Top