BLASTX nr result

ID: Cnidium21_contig00020888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020888
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...   114   8e-24
gb|ADL36717.1| HD domain class transcription factor [Malus x dom...   108   3e-22
ref|XP_002318839.1| tir-nbs-lrr resistance protein [Populus tric...   103   2e-20
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...   100   9e-20
gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Popu...    99   3e-19

>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
           gi|223543328|gb|EEF44860.1| TMV resistance protein N,
           putative [Ricinus communis]
          Length = 1186

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/127 (45%), Positives = 84/127 (66%)
 Frame = -1

Query: 382 AFSKHEEIFKREVDEIKRKVLMDKIKRWRTALTQVANLGGMPLQNSTNGYESKFILKIVN 203
           AF+KHE+ FK +         M +++ WR AL + A LGGM LQ+   GYES+FI  IV 
Sbjct: 131 AFAKHEKDFKED---------MSRVEEWRAALKEAAELGGMVLQD---GYESQFIQTIVK 178

Query: 202 VIKDKVACNHLTITPHPVGIDASVNAINLWLRDGSTNVEVFALYGIGGVGKTTIAKYVYN 23
            +++K++   L + P+ VG ++ +  I  WLRDGS +VE+  +YGIGG+GKTTIAK VYN
Sbjct: 179 EVENKLSRTVLHVAPYLVGTESRMARITRWLRDGSDDVEIATIYGIGGIGKTTIAKIVYN 238

Query: 22  MNLQTFE 2
            N ++F+
Sbjct: 239 QNFRSFD 245


>gb|ADL36717.1| HD domain class transcription factor [Malus x domestica]
          Length = 561

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/104 (51%), Positives = 73/104 (70%)
 Frame = -1

Query: 313 KIKRWRTALTQVANLGGMPLQNSTNGYESKFILKIVNVIKDKVACNHLTITPHPVGIDAS 134
           K++  R AL Q+A+L GM L N  + Y+SKFI KIV VI DK+    L +  + +GI + 
Sbjct: 146 KVRGRREALAQLADLAGMVLSNQADRYKSKFITKIVKVIGDKLIRTPLGVESNLIGIQSR 205

Query: 133 VNAINLWLRDGSTNVEVFALYGIGGVGKTTIAKYVYNMNLQTFE 2
           V  INLWL+DGST+V + A++G+ G+GKTTIAKYVYN N  +FE
Sbjct: 206 VKRINLWLQDGSTDVGIVAVHGMSGIGKTTIAKYVYNSNFTSFE 249


>ref|XP_002318839.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859512|gb|EEE97059.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 937

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/127 (40%), Positives = 74/127 (58%)
 Frame = -1

Query: 382 AFSKHEEIFKREVDEIKRKVLMDKIKRWRTALTQVANLGGMPLQNSTNGYESKFILKIVN 203
           AF +HEE FK E         M+K+++WR AL + ANL G+ L +  NG+ESKF+ KIV 
Sbjct: 114 AFDRHEERFKEE---------MEKVQKWRKALVEAANLSGLDLHSVANGHESKFVQKIVQ 164

Query: 202 VIKDKVACNHLTITPHPVGIDASVNAINLWLRDGSTNVEVFALYGIGGVGKTTIAKYVYN 23
            +  K+   ++ +  +PVGID+ V  I   L  G+  V    +YG+ G+GKT IAK V+N
Sbjct: 165 EVSSKLNPRYMNVATYPVGIDSQVKDIIAMLSVGTNEVRTVGIYGMPGIGKTAIAKAVFN 224

Query: 22  MNLQTFE 2
                FE
Sbjct: 225 QLCHKFE 231


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223541425|gb|EEF42975.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/127 (39%), Positives = 80/127 (62%)
 Frame = -1

Query: 382 AFSKHEEIFKREVDEIKRKVLMDKIKRWRTALTQVANLGGMPLQNSTNGYESKFILKIVN 203
           AF +HE++FK E         M+ ++ WR AL +VA++GGM L+N    ++S+FI  IV 
Sbjct: 133 AFERHEKVFKEE---------MEMVEGWRAALREVADMGGMVLENR---HQSQFIQNIVK 180

Query: 202 VIKDKVACNHLTITPHPVGIDASVNAINLWLRDGSTNVEVFALYGIGGVGKTTIAKYVYN 23
            + +K+    L +  + VGID+ +  IN WL+D S +V +  +YG+GG+GKTT+AK ++N
Sbjct: 181 EVGNKLNRVVLNVASYLVGIDSRIADINSWLQDDSKDVGIATIYGVGGIGKTTLAKIIFN 240

Query: 22  MNLQTFE 2
            N   F+
Sbjct: 241 QNFDKFD 247


>gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/127 (40%), Positives = 73/127 (57%)
 Frame = -1

Query: 382 AFSKHEEIFKREVDEIKRKVLMDKIKRWRTALTQVANLGGMPLQNSTNGYESKFILKIVN 203
           AF +HEE FK  ++          + +WR  L + ANL G  LQ   NG+E+KFI K+V 
Sbjct: 314 AFKRHEERFKENIE---------MVNKWRKVLVEAANLSGWHLQEMENGHEAKFIEKMVE 364

Query: 202 VIKDKVACNHLTITPHPVGIDASVNAINLWLRDGSTNVEVFALYGIGGVGKTTIAKYVYN 23
            +  K+ C +LT+  +PVGID+ V  +   L   + +V    +YG+GG+GKTTIAK V+N
Sbjct: 365 DVLHKLNCKYLTVASYPVGIDSRVKDVVSMLSVYTDDVRTVGIYGMGGIGKTTIAKAVFN 424

Query: 22  MNLQTFE 2
                FE
Sbjct: 425 ELCNEFE 431


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