BLASTX nr result

ID: Cnidium21_contig00020853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020853
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   165   4e-39
ref|XP_003604758.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   162   3e-38
ref|XP_003591245.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   161   6e-38
ref|XP_003599924.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   160   1e-37
ref|XP_003598094.1| Helicase-like protein [Medicago truncatula] ...   160   1e-37

>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1427

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/141 (54%), Positives = 103/141 (73%)
 Frame = -1

Query: 468  LMRNLNQIMGLCNGTRMIVTKCLSNNVECEILCGSQVGTRHLIPRIEMEPTDTKWPFVFK 289
            L+RN+N  +G+CNGTR+I+T      +E +I+ GS VG++ LIPRI +   D+KWPF+ +
Sbjct: 1283 LLRNINPALGMCNGTRLIITHLGERVIEAKIITGSNVGSKVLIPRIVLTSNDSKWPFLLR 1342

Query: 288  RIQFPLQICFAMTINKSQGQSLNTVGLYLPPSVFSHGQFYVDVSRVTLPQGLHILIIDES 109
            R QFP+++C+AMTINKSQGQSLN VGLYLP  VFSHGQ YV  SRVT P+GL ILI++  
Sbjct: 1343 RRQFPIKVCYAMTINKSQGQSLNYVGLYLPRPVFSHGQLYVAFSRVTSPEGLKILIVERD 1402

Query: 108  GINNNYTANVMFDEFFYNIPE 46
                 YT NV++ E F  +P+
Sbjct: 1403 ENYVQYTKNVVYHEVFSGLPQ 1423


>ref|XP_003604758.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355505813|gb|AES86955.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 175

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/139 (56%), Positives = 103/139 (74%)
 Frame = -1

Query: 468 LMRNLNQIMGLCNGTRMIVTKCLSNNVECEILCGSQVGTRHLIPRIEMEPTDTKWPFVFK 289
           LMRNL+   GLCNGTR+I+TK     +E +++ GS +G +  IPR+ +EP+DT+ PF F+
Sbjct: 37  LMRNLDPTTGLCNGTRLIITKMGRYVLEGKVITGSNIGEKVFIPRLSLEPSDTRIPFKFQ 96

Query: 288 RIQFPLQICFAMTINKSQGQSLNTVGLYLPPSVFSHGQFYVDVSRVTLPQGLHILIIDES 109
           R QFP+ +CFAMTINKSQGQSL  VG+YLP  VFSHGQ YV +SRVT  +GL IL++DE 
Sbjct: 97  RRQFPISVCFAMTINKSQGQSLKQVGIYLPQPVFSHGQLYVAISRVTSRKGLKILLLDEH 156

Query: 108 GINNNYTANVMFDEFFYNI 52
           G   + T NV+F+E F N+
Sbjct: 157 GCCIDSTNNVVFNEIFRNV 175


>ref|XP_003591245.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355480293|gb|AES61496.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1517

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/139 (55%), Positives = 103/139 (74%)
 Frame = -1

Query: 468  LMRNLNQIMGLCNGTRMIVTKCLSNNVECEILCGSQVGTRHLIPRIEMEPTDTKWPFVFK 289
            L+R ++Q +GLCNGTR+I+TK     +E E++ GS +G +  IPR+ ++P+DT+ PF FK
Sbjct: 1379 LLRTIDQNLGLCNGTRLIITKMGKFVLEAEVISGSNIGEKVFIPRLSLQPSDTRIPFKFK 1438

Query: 288  RIQFPLQICFAMTINKSQGQSLNTVGLYLPPSVFSHGQFYVDVSRVTLPQGLHILIIDES 109
            R QFPL + FAMTINKSQGQSL  VG+YLP SVFSHGQ YV +SRVT   GL +LI DE 
Sbjct: 1439 RRQFPLSVSFAMTINKSQGQSLKNVGVYLPSSVFSHGQLYVAISRVTSRDGLKMLINDED 1498

Query: 108  GINNNYTANVMFDEFFYNI 52
            G + + T+NV++ E F N+
Sbjct: 1499 GQDTDVTSNVVYKEVFRNV 1517


>ref|XP_003599924.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355488972|gb|AES70175.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 564

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/139 (54%), Positives = 103/139 (74%)
 Frame = -1

Query: 468 LMRNLNQIMGLCNGTRMIVTKCLSNNVECEILCGSQVGTRHLIPRIEMEPTDTKWPFVFK 289
           L+R ++Q +GLCNGTR+I+TK     +E E++ GS +G +  IPR+ ++P+DT+ PF FK
Sbjct: 426 LLRTIDQNLGLCNGTRLIITKMGKFVLEAEVISGSNIGEKVFIPRLSLQPSDTRIPFKFK 485

Query: 288 RIQFPLQICFAMTINKSQGQSLNTVGLYLPPSVFSHGQFYVDVSRVTLPQGLHILIIDES 109
           R QFPL + FAMTINKSQGQSL  VG+YLP  VFSHGQ YV +SRVT   GL +LI DE 
Sbjct: 486 RRQFPLSVSFAMTINKSQGQSLKNVGVYLPSPVFSHGQLYVAISRVTSRDGLKMLINDED 545

Query: 108 GINNNYTANVMFDEFFYNI 52
           G + + T+NV++ E F+N+
Sbjct: 546 GQDTDVTSNVVYREVFHNV 564


>ref|XP_003598094.1| Helicase-like protein [Medicago truncatula]
            gi|355487142|gb|AES68345.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1672

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/139 (56%), Positives = 102/139 (73%)
 Frame = -1

Query: 468  LMRNLNQIMGLCNGTRMIVTKCLSNNVECEILCGSQVGTRHLIPRIEMEPTDTKWPFVFK 289
            LMRNL+   GLCNGTR+I+TK     +E +++ GS +G +  IPR+ +EP+DT+ PF F+
Sbjct: 1534 LMRNLDPTAGLCNGTRLIITKMGRYVLEGKVITGSNIGEKVFIPRLSLEPSDTRIPFKFQ 1593

Query: 288  RIQFPLQICFAMTINKSQGQSLNTVGLYLPPSVFSHGQFYVDVSRVTLPQGLHILIIDES 109
            R QFP+ ICFAMTINKSQGQSL  VG+YLP  VF HGQ YV +SRVT  +GL IL++DE+
Sbjct: 1594 RRQFPISICFAMTINKSQGQSLKQVGIYLPQPVFYHGQLYVAISRVTSRKGLKILLLDEN 1653

Query: 108  GINNNYTANVMFDEFFYNI 52
            G   + T NV+F E F N+
Sbjct: 1654 GCCIDSTNNVVFKEIFRNV 1672


Top