BLASTX nr result

ID: Cnidium21_contig00020828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020828
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516437.1| conserved hypothetical protein [Ricinus comm...   213   4e-53
ref|XP_002279306.1| PREDICTED: uncharacterized protein LOC100254...   212   9e-53
ref|XP_002309501.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
gb|ABK93997.1| unknown [Populus trichocarpa]                          207   2e-51
emb|CAN80190.1| hypothetical protein VITISV_042373 [Vitis vinifera]   207   2e-51

>ref|XP_002516437.1| conserved hypothetical protein [Ricinus communis]
           gi|223544257|gb|EEF45778.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 272

 Score =  213 bits (542), Expect = 4e-53
 Identities = 121/271 (44%), Positives = 165/271 (60%), Gaps = 8/271 (2%)
 Frame = -3

Query: 791 MTDRVYPSXXXXXXXXXXXXXXXT-LPIPP----SKTNLYNPSRHPYRQNLPHKTRSTHR 627
           M+DRV+PS               T  P PP    +K++LYNP+  P  +  P + R+   
Sbjct: 1   MSDRVFPSSKPATNGGTATTAATTPAPNPPPPASNKSHLYNPTARPPYRPQPRRRRTRSG 60

Query: 626 RNYFCCCCFWSILIIFVLLIATAFAGAIAYSIYKPHRPIFAFTSLKISQFNLTTASD-DS 450
           R+  CCCCFW++L I +L++  A AGA  Y +Y+PHRP F+  SL+I + NLTT++D  S
Sbjct: 61  RSICCCCCFWTLLAILLLILLAAIAGAALYILYRPHRPAFSIPSLRIHRLNLTTSADSSS 120

Query: 449 TRLTTKLNITLSSTNPNTKIILIYDQIEITALSTQ-EVELAKGSFKSFTSMQKNITYIHT 273
           + ++T LN+TL S NPN+ +   YD   I++LS+  +V L  G+  ++T  +KN T    
Sbjct: 121 SHVSTLLNLTLISKNPNSHLTFFYDSFAISSLSSDGDVFLGNGTIPAYTLGKKNETSFRN 180

Query: 272 QLYSTSQVLDADSVKSLRSDLKKKS-GVPLKILLDTKVVVKADNLKSKKVGIRIKCEGVH 96
            + S S  LDA+SV +LRSDLKKKS GV LKI LDTKV +K   LK+KKVGIR+ C+G+ 
Sbjct: 181 VVVSGSNDLDAESVNALRSDLKKKSGGVALKIELDTKVKLKMGGLKTKKVGIRVTCDGIK 240

Query: 95  ATVPKGXXXXXXXXXXXXXXVDLRIKIWKWT 3
             VPKG              VDLRIKIWKWT
Sbjct: 241 GVVPKGKSPTVAVTSASKCKVDLRIKIWKWT 271


>ref|XP_002279306.1| PREDICTED: uncharacterized protein LOC100254397 [Vitis vinifera]
          Length = 265

 Score =  212 bits (539), Expect = 9e-53
 Identities = 113/266 (42%), Positives = 158/266 (59%), Gaps = 3/266 (1%)
 Frame = -3

Query: 791 MTDRVYPSXXXXXXXXXXXXXXXTLPIPPSKTNLYNPSRHPYRQNLPHKTRSTHRRNYFC 612
           MTDRVYPS                   P +K++LYNP+R  YR     +      R+  C
Sbjct: 1   MTDRVYPSSKPTTTGAAPGGTTAPAAAP-AKSHLYNPTRPTYRPQAHRRRPRRSCRSICC 59

Query: 611 CCCFWSILIIFVLLIATAFAGAIAYSIYKPHRPIFAFTSLKISQFNLTTASDDST---RL 441
           CC FW +L++ +L++  A AGA  +  Y+PH P F+ ++ K +QFNL+ +S D++    L
Sbjct: 60  CCFFWFLLVLLLLILLAATAGAALWVFYRPHSPTFSVSTFKTTQFNLSASSADASSSGHL 119

Query: 440 TTKLNITLSSTNPNTKIILIYDQIEITALSTQEVELAKGSFKSFTSMQKNITYIHTQLYS 261
           +   N+T+++ NPN KI + YD   ++ +S+ +V LA GS+ +F S  K+ T +   L S
Sbjct: 120 SAAFNLTIAARNPNKKITIFYDPFTVS-ISSNDVILANGSYPAFASSPKDFTVLKPTLSS 178

Query: 260 TSQVLDADSVKSLRSDLKKKSGVPLKILLDTKVVVKADNLKSKKVGIRIKCEGVHATVPK 81
            S+ LDADSV SLRSDLKKKSG+PL+  +DTKV +K    KS KVGIR+ C+G+ A VPK
Sbjct: 179 HSRDLDADSVTSLRSDLKKKSGLPLEFQMDTKVKIKMGGFKSSKVGIRVTCDGIQAAVPK 238

Query: 80  GXXXXXXXXXXXXXXVDLRIKIWKWT 3
           G              VDLRIKIWKWT
Sbjct: 239 GKSPSVASTSDSRCEVDLRIKIWKWT 264


>ref|XP_002309501.1| predicted protein [Populus trichocarpa] gi|222855477|gb|EEE93024.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  207 bits (528), Expect = 2e-51
 Identities = 124/276 (44%), Positives = 162/276 (58%), Gaps = 13/276 (4%)
 Frame = -3

Query: 791 MTDRVYPSXXXXXXXXXXXXXXXTLPIPP----SKTNLYNP-SRHPYRQNLPHKTRSTHR 627
           M+D+V+PS               T   PP    +K++LYNP SR PYR   PH  R   R
Sbjct: 1   MSDKVFPSSKPAANGTATNPTTTTTNNPPPATTNKSHLYNPTSRLPYRPQ-PHTRRHRSR 59

Query: 626 --RNYFCCCCFWSILIIFVLLIATAFAGAIAYSIYKPHRPIFAFTSLKISQFNLTTASD- 456
             RN  CCCCFW+IL I +LL+  A AGA  Y +Y+PHRP F  TSL+I + NLTT+ D 
Sbjct: 60  SGRNICCCCCFWTILTILLLLLLAAIAGAALYILYRPHRPSFTITSLRIHRLNLTTSPDS 119

Query: 455 DSTRLTTKLNITLSSTNPNTKIILIYDQIEITALST-QEVELAKGSFKSFTSMQKNITYI 279
            S+ L+T  N+T+ S NPN+ I L Y+   ++ALS   +V L  G+  +F+  +KN T  
Sbjct: 120 SSSHLSTLFNLTIISKNPNSHISLDYEPFTVSALSDGNDVFLGNGTLPAFSLSKKNQTSF 179

Query: 278 HTQLYSTSQVLDADSVKSLRSDLKKK----SGVPLKILLDTKVVVKADNLKSKKVGIRIK 111
              + S S  LD D+V SLRSDLKKK      V LKI +DTKV +K   LK+KKVGIR+ 
Sbjct: 180 RNVVVSGSNDLDVDAVNSLRSDLKKKKSENGSVMLKIEMDTKVKMKVGGLKTKKVGIRVT 239

Query: 110 CEGVHATVPKGXXXXXXXXXXXXXXVDLRIKIWKWT 3
           C+G+  ++PKG              VDLRIKIW+WT
Sbjct: 240 CDGIKGSIPKGKTPTVAVTAKSECKVDLRIKIWRWT 275


>gb|ABK93997.1| unknown [Populus trichocarpa]
          Length = 276

 Score =  207 bits (528), Expect = 2e-51
 Identities = 124/276 (44%), Positives = 162/276 (58%), Gaps = 13/276 (4%)
 Frame = -3

Query: 791 MTDRVYPSXXXXXXXXXXXXXXXTLPIPP----SKTNLYNP-SRHPYRQNLPHKTRSTHR 627
           M+D+V+PS               T   PP    +K++LYNP SR PYR   PH  R   R
Sbjct: 1   MSDKVFPSSEPAANGTATNPTTTTTNNPPPATTNKSHLYNPTSRLPYRPQ-PHTRRHRSR 59

Query: 626 --RNYFCCCCFWSILIIFVLLIATAFAGAIAYSIYKPHRPIFAFTSLKISQFNLTTASD- 456
             RN  CCCCFW+IL I +LL+  A AGA  Y +Y+PHRP F  TSL+I + NLTT+ D 
Sbjct: 60  SGRNICCCCCFWTILTILLLLLLAAIAGAALYILYRPHRPSFTITSLRIHRLNLTTSPDS 119

Query: 455 DSTRLTTKLNITLSSTNPNTKIILIYDQIEITALST-QEVELAKGSFKSFTSMQKNITYI 279
            S+ L+T  N+T+ S NPN+ I L Y+   ++ALS   +V L  G+  +F+  +KN T  
Sbjct: 120 SSSHLSTLFNLTIISKNPNSHISLDYEPFTVSALSDGNDVFLGNGTLPAFSLSKKNQTSF 179

Query: 278 HTQLYSTSQVLDADSVKSLRSDLKKK----SGVPLKILLDTKVVVKADNLKSKKVGIRIK 111
              + S S  LD D+V SLRSDLKKK      V LKI +DTKV +K   LK+KKVGIR+ 
Sbjct: 180 RNVVVSGSNDLDVDAVNSLRSDLKKKKSENGSVMLKIEMDTKVKMKVGGLKTKKVGIRVT 239

Query: 110 CEGVHATVPKGXXXXXXXXXXXXXXVDLRIKIWKWT 3
           C+G+  ++PKG              VDLRIKIW+WT
Sbjct: 240 CDGIKGSIPKGKTPTVAVTAKSECKVDLRIKIWRWT 275


>emb|CAN80190.1| hypothetical protein VITISV_042373 [Vitis vinifera]
          Length = 302

 Score =  207 bits (527), Expect = 2e-51
 Identities = 105/238 (44%), Positives = 150/238 (63%), Gaps = 3/238 (1%)
 Frame = -3

Query: 707 PSKTNLYNPSRHPYRQNLPHKTRSTHRRNYFCCCCFWSILIIFVLLIATAFAGAIAYSIY 528
           P+K++LYNP+R  YR     +      R+  CCC FW +L++ +L++  A AGA  +  Y
Sbjct: 65  PAKSHLYNPTRPTYRPQAHRRRPRRSCRSICCCCFFWFLLVLLLLILLAATAGAALWVFY 124

Query: 527 KPHRPIFAFTSLKISQFNLTTASDDST---RLTTKLNITLSSTNPNTKIILIYDQIEITA 357
           +PH P F+ ++ K +QFNL+ +S D++    L+   N+T+++ NPN KI + YD   ++ 
Sbjct: 125 RPHSPTFSVSTFKTTQFNLSASSADASSSGHLSAAFNLTIAARNPNKKITIFYDPFTVS- 183

Query: 356 LSTQEVELAKGSFKSFTSMQKNITYIHTQLYSTSQVLDADSVKSLRSDLKKKSGVPLKIL 177
           +S+ +V LA GS+ +F S  K+ T +   L S S+ LDADSV SLRSDLKKKSG+PL+  
Sbjct: 184 ISSNDVILANGSYPAFASSPKDFTVLKPTLSSHSRDLDADSVTSLRSDLKKKSGLPLEFQ 243

Query: 176 LDTKVVVKADNLKSKKVGIRIKCEGVHATVPKGXXXXXXXXXXXXXXVDLRIKIWKWT 3
           +DTKV +K    KS KVGIR+ C+G+ A VPKG              VDLRIKIWKWT
Sbjct: 244 MDTKVKIKMGGFKSSKVGIRVTCDGIQAAVPKGKSPSVASTSDSKCEVDLRIKIWKWT 301


Top