BLASTX nr result

ID: Cnidium21_contig00020803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020803
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632020.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    62   5e-08
emb|CBI23605.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_003626792.1| 1-aminocyclopropane-1-carboxylate oxidase-li...    62   6e-08
emb|CBI23591.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    61   1e-07

>ref|XP_003632020.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 680

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -3

Query: 384 RALVNRDNARISAPCFFHGSTSQSIKYA-PVEDLISEENPPIYKSFQVSDYMEKFFSKRL 208
           R + N    RIS   FF G+ ++  K   P+++LISEENPP+Y+ F V++Y+ KF SK L
Sbjct: 610 RVVANHVGPRISTAYFFSGARTEPAKLCGPLKELISEENPPVYRDFLVAEYIGKFMSKGL 669

Query: 207 DGQELRDLFKI 175
           D     D FK+
Sbjct: 670 DDDSGLDYFKL 680


>emb|CBI23605.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -3

Query: 384 RALVNRDNARISAPCFFHGSTSQSIKYA-PVEDLISEENPPIYKSFQVSDYMEKFFSKRL 208
           R + N    RIS   FF G+ ++  K   P+++LISEENPP+Y+ F V++Y+ KF SK L
Sbjct: 164 RVVANHVGPRISTAYFFSGARTEPAKLCGPLKELISEENPPVYRDFLVAEYIGKFMSKGL 223

Query: 207 DGQELRDLFKI 175
           D     D FK+
Sbjct: 224 DDDSGLDYFKL 234


>ref|XP_003626792.1| 1-aminocyclopropane-1-carboxylate oxidase-like protein [Medicago
           truncatula] gi|355520814|gb|AET01268.1|
           1-aminocyclopropane-1-carboxylate oxidase-like protein
           [Medicago truncatula]
          Length = 76

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -3

Query: 384 RALVNRDNARISAPCFFH-GSTSQSIKYAPVEDLISEENPPIYKSFQVSDYMEKFFSKRL 208
           R L N+   RIS  CFF  G  S S  Y P++DL+SE+NPP Y+   V+DY+  F  K L
Sbjct: 6   RVLANKIGPRISVACFFSTGHWSSSKLYGPIKDLLSEDNPPKYRETTVADYLAYFVEKGL 65

Query: 207 DGQELRDLFKI 175
           DG      +KI
Sbjct: 66  DGTSALTHYKI 76


>emb|CBI23591.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
 Frame = -3

Query: 384 RALVNRDNARISAPCFFHGSTSQSIK-YAPVEDLISEENPPIYKSFQVSDYMEKFFSKRL 208
           R L N    R+S  CFF  S   S K Y P+++L+SEENPP YK   V DY+  F SK L
Sbjct: 136 RVLANHIGPRVSVACFFSTSIQPSSKLYGPIKELLSEENPPKYKETTVGDYVAYFNSKGL 195

Query: 207 DGQELRDLFKI 175
           DG      F++
Sbjct: 196 DGTSALPHFRL 206


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
 Frame = -3

Query: 384 RALVNRDNARISAPCFFHGSTSQSIK-YAPVEDLISEENPPIYKSFQVSDYMEKFFSKRL 208
           R L N    R+S  CFF  S   S K Y P+++L+SEENPP YK   V DY+  F SK L
Sbjct: 295 RVLANHIGPRVSVACFFSTSIQPSSKLYGPIKELLSEENPPKYKETTVGDYVAYFNSKGL 354

Query: 207 DGQELRDLFKI 175
           DG      F++
Sbjct: 355 DGTSALPHFRL 365


Top