BLASTX nr result
ID: Cnidium21_contig00020800
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00020800
(1621 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200908.1| Replication factor-A protein 1-like protein [Ar... 97 2e-17
gb|EEC82987.1| hypothetical protein OsI_28022 [Oryza sativa Indi... 92 3e-16
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab... 91 9e-16
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-... 89 3e-15
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-... 89 3e-15
>ref|NP_200908.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana]
gi|10177323|dbj|BAB10649.1| replication protein A1
[Arabidopsis thaliana] gi|28393124|gb|AAO41995.1|
putative RNA helicase [Arabidopsis thaliana]
gi|332010026|gb|AED97409.1| Replication factor-A protein
1-like protein [Arabidopsis thaliana]
Length = 629
Score = 96.7 bits (239), Expect = 2e-17
Identities = 92/419 (21%), Positives = 188/419 (44%), Gaps = 23/419 (5%)
Frame = +2
Query: 50 MSTKFHALTELKKGSDNWXXXXXXXXXXXXXSKTGEQFKG--FNIILLDDQGNRIHAFVP 223
M+ + H L L NW + + +G FN+ L D++G +I A +
Sbjct: 177 MTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMF 236
Query: 224 GNVAEHFQQQINLGKIHTISNLQVRDYKTDEKYRCIHYDKQVIFTQRTKVVKLMEKDASI 403
+ A F + LGK++ IS ++ +++++ + D ++ + ++V + ++ I
Sbjct: 237 NDAARKFFDRFQLGKVYYISRGSLK--LANKQFKTVQNDYEMTLNENSEVEEASSEEMFI 294
Query: 404 ENNVFDFYDLADLTYRANQNVYLTDVIGVIKFDEP---LRRFPNKLGVPQSQYKFQIGDG 574
F+F + +L NQ L D+IGV++ P +RR + +P+ +
Sbjct: 295 PETKFNFVPIEELGLYVNQK-ELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITL-ADES 352
Query: 575 RSTVNVTLWDSLAELFANSLSEELEQPVIIILASARVGFWQEEVDVSNVPATMFYINYKH 754
R TV V+LW+ LA L + +Q +I + S +VG +Q V +S + + IN +
Sbjct: 353 RKTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLKVGDFQ-GVSLSTISRSNVVINPES 411
Query: 755 HSVFELRKRMTQPDFTQLNFSTQESQMT--------KMYT----INEIKNFDKEYKEIEV 898
+L K + +++ S+ S M+ +YT ++ I + ++E V
Sbjct: 412 PEAKKL-KSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPV 470
Query: 899 ICQLK--LRFVETTEKWYFFECTTCHKEI-EKVEGKFFCIICNRNVPHPKKRFEIFTVSS 1069
+ + F++ + ++ C TC+K++ E ++ ++C C R R+ + +
Sbjct: 471 FFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVT 530
Query: 1070 DKTGPIQIILGDRQVRTIIGMDVDEVD--KTEKGE-NNFPIILKTMEKQDYTVRLLIKE 1237
D +G I + + I+G DE++ K+E+GE N + LK + R+ + +
Sbjct: 531 DSSGETWISSFNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQ 589
>gb|EEC82987.1| hypothetical protein OsI_28022 [Oryza sativa Indica Group]
Length = 705
Score = 92.4 bits (228), Expect = 3e-16
Identities = 87/407 (21%), Positives = 177/407 (43%), Gaps = 24/407 (5%)
Frame = +2
Query: 62 FHALTELKKGSDNWXXXXXXXXXXXXXSKTGEQFKGFNIILLDDQGNRIHAFVPGNVAEH 241
+ ++EL W + ++ F+++L+D++G IHA + N+ ++
Sbjct: 3 YKKISELTTKGQTWSIKAKILRMWDSVNFATDEIMSFDMLLMDEEGETIHATIWKNLIDN 62
Query: 242 FQQQINLGKIHTISNLQVRDYKTDEKYRCIHYDKQVIFTQRTKVVKLMEKDASIENNVFD 421
F+ I+ I+ SN +V++ KY + D ++ F TKV ++ + F+
Sbjct: 63 FRPMISENSIYAFSNFKVQE---STKYCPVDKDLKITFMYNTKVKEMKGASNKFKEYYFE 119
Query: 422 FYDLADLTYRANQNVYLTDVIGVIKFDEP------LRRFPNKLGVPQSQYKFQIGDGRST 583
F L R N++ L+DVIG++ +P ++ N + + + DG +
Sbjct: 120 FATRETLVDRVNKDKILSDVIGLLTKIKPIESRMIMKNSTNPRPKDIREIELLLLDG-AK 178
Query: 584 VNVTLWDSLAELFANSLSEEL--EQPVIIILASARVGFWQEEVDVSNVPATMFYINYKHH 757
+ VTLW L A+SL+E++ V+++ ++ F + + + AT Y +
Sbjct: 179 IRVTLWGQL----AHSLNEDVIGNHTVVVVTSTTVQEF--NGLSLRSSSATRLYTDINIP 232
Query: 758 SVFELRKRMTQ----PDFTQLNFSTQESQMTKMY----TINEIKNF-DKEYKEIEVICQL 910
+++ R + P +++ STQ + +M+ T+ EI N + K + IC
Sbjct: 233 ETWKIISRHSDEQNLPKLMEVDKSTQGTLEEQMFYNRKTLQEITNMGHDDTKSQDFICTT 292
Query: 911 KLRFVETTE-KWYFFECTTCHKEIEKVEGKFFCIICNRNVPHPKKRFEIFTVSS------ 1069
K + W++ C C+K++ K K++C C + K R ++SS
Sbjct: 293 KATIDHLQDVTWWYMSCNDCNKKVVKKIDKYYCEKCKMYPENTKPRMLNTSISSLLNSLD 352
Query: 1070 DKTGPIQIILGDRQVRTIIGMDVDEVDKTEKGENNFPIILKTMEKQD 1210
+ + I+ RT I ++ +G++N+ I+ +T D
Sbjct: 353 GRCEEVPTIIQQLCGRTFIFQLKLNIENLTQGKSNY-IVRRTFVPDD 398
>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 90.9 bits (224), Expect = 9e-16
Identities = 88/419 (21%), Positives = 186/419 (44%), Gaps = 23/419 (5%)
Frame = +2
Query: 50 MSTKFHALTELKKGSDNWXXXXXXXXXXXXXSKTGEQFKG--FNIILLDDQGNRIHAFVP 223
M+ + H L L NW + + +G FN+ L D++G +I A +
Sbjct: 179 MTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMF 238
Query: 224 GNVAEHFQQQINLGKIHTISNLQVRDYKTDEKYRCIHYDKQVIFTQRTKVVKLMEKDASI 403
+ A F + LGK++ IS ++ +++++ + D ++ + ++V + ++ I
Sbjct: 239 NDAARKFYDRFQLGKVYYISRGSLK--LANKQFKTVQNDYEMTLNENSEVEEASSEEMFI 296
Query: 404 ENNVFDFYDLADLTYRANQNVYLTDVIGVIKFDEP---LRRFPNKLGVPQSQYKFQIGDG 574
F+F + +L NQ L D+IGV++ P +RR + +P+ +
Sbjct: 297 PETKFNFVPIEELGLYVNQK-ELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITL-ADES 354
Query: 575 RSTVNVTLWDSLAELFANSLSEELEQPVIIILASARVGFWQEEVDVSNVPATMFYINYKH 754
+ TV V+LW+ LA L + ++ ++ + S +VG +Q V +S + + IN +
Sbjct: 355 KKTVVVSLWNDLATGIGQELLDMADKSPVVAIKSLKVGDFQ-GVSLSTISRSNVVINPES 413
Query: 755 HSVFELRKRMTQPDFTQLNFSTQESQMT--------KMYT----INEIKNFDK--EYKEI 892
+L K + +++ S+ S M+ MYT ++ I + E K +
Sbjct: 414 PEAKKL-KSWFDSEGKEISMSSIGSGMSPSSKNGSRSMYTDRVLLSHITSNPSLGEEKPV 472
Query: 893 EVICQLKLRFVETTEKWYFFECTTCHKEI-EKVEGKFFCIICNRNVPHPKKRFEIFTVSS 1069
+ + F++ + ++ C TC+K++ E ++ ++C C + R+ + +
Sbjct: 473 FFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQKKYEECSLRYIMAVKVT 532
Query: 1070 DKTGPIQIILGDRQVRTIIGMDVDEVDK--TEKGE-NNFPIILKTMEKQDYTVRLLIKE 1237
D +G I + + I+G D+++K +E GE N + LK + R+ + +
Sbjct: 533 DSSGETWISSFNDEAEKILGCSADDLNKLRSEGGEVNEYQTKLKEATWSSHVFRVSVSQ 591
>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 560
Score = 89.0 bits (219), Expect = 3e-15
Identities = 86/382 (22%), Positives = 172/382 (45%), Gaps = 21/382 (5%)
Frame = +2
Query: 170 FNIILLDDQGNRIHAFVPGNVAEHFQQQINLGKIHTISNLQVRDYKTDEKYRCIHYDKQV 349
FN++L D+ G +I A + + A F ++ +LGK++ +S ++ ++K++ + D ++
Sbjct: 152 FNVVLTDEDGTQIQATMFNDAARKFYEKFSLGKVYYVSRGTLK--VANKKFKTVQNDYEM 209
Query: 350 IFTQRTKVVKLMEKDASIENNVFDFYDLADLTYRANQNVYLTDVIGVIK---FDEPLRRF 520
++V ++ + A + ++F + L N L DVIGV++ +RR
Sbjct: 210 TLNVNSQVDEVSNEAAFVPETKYNFVKIDMLGPHVNGR-DLVDVIGVVQNVSSTMSIRRK 268
Query: 521 PNKLGVPQSQYKFQIGDGRSTVNVTLWDSLAELFANSLSEELEQPVIIILASARVGFWQE 700
N P+ + + TV ++LW+ LA L + +Q II L RVG +Q
Sbjct: 269 INNETAPKRDVTI-ADETKKTVVISLWNDLATTVGQELLDIADQSPIIALKYLRVGDFQ- 326
Query: 701 EVDVSNVPATMFYINYKHHSVFELR-------KRMTQPDFTQLNFSTQESQMTKMYT--- 850
V +S + + IN +LR K ++ + + +S MY+
Sbjct: 327 GVSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRI 386
Query: 851 ----INEIKNFDKEYKEIEVICQLKLRFVETTEKWYFFECTTCHKEI-EKVEGKFFCIIC 1015
I E K+ +E K + + F++ + ++ C TC+K++ E + ++C C
Sbjct: 387 SLSHILENKSLGEE-KPTFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDNC 445
Query: 1016 NRNVPHPKKRFEIFTVSSDKTGPIQIILGDRQVRTIIGMDVDEVD--KTEKG-ENNFPII 1186
+N R+ + SD +G + + + I+G DE+D K++ G EN++ +
Sbjct: 446 QKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLK 505
Query: 1187 LKTMEKQDYTVRLLIKEANIDN 1252
LK + R+ + + +N
Sbjct: 506 LKEATWVPHLFRVSVSQNEYNN 527
>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 603
Score = 89.0 bits (219), Expect = 3e-15
Identities = 86/382 (22%), Positives = 172/382 (45%), Gaps = 21/382 (5%)
Frame = +2
Query: 170 FNIILLDDQGNRIHAFVPGNVAEHFQQQINLGKIHTISNLQVRDYKTDEKYRCIHYDKQV 349
FN++L D+ G +I A + + A F ++ +LGK++ +S ++ ++K++ + D ++
Sbjct: 195 FNVVLTDEDGTQIQATMFNDAARKFYEKFSLGKVYYVSRGTLK--VANKKFKTVQNDYEM 252
Query: 350 IFTQRTKVVKLMEKDASIENNVFDFYDLADLTYRANQNVYLTDVIGVIK---FDEPLRRF 520
++V ++ + A + ++F + L N L DVIGV++ +RR
Sbjct: 253 TLNVNSQVDEVSNEAAFVPETKYNFVKIDMLGPHVNGR-DLVDVIGVVQNVSSTMSIRRK 311
Query: 521 PNKLGVPQSQYKFQIGDGRSTVNVTLWDSLAELFANSLSEELEQPVIIILASARVGFWQE 700
N P+ + + TV ++LW+ LA L + +Q II L RVG +Q
Sbjct: 312 INNETAPKRDVTI-ADETKKTVVISLWNDLATTVGQELLDIADQSPIIALKYLRVGDFQ- 369
Query: 701 EVDVSNVPATMFYINYKHHSVFELR-------KRMTQPDFTQLNFSTQESQMTKMYT--- 850
V +S + + IN +LR K ++ + + +S MY+
Sbjct: 370 GVSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRI 429
Query: 851 ----INEIKNFDKEYKEIEVICQLKLRFVETTEKWYFFECTTCHKEI-EKVEGKFFCIIC 1015
I E K+ +E K + + F++ + ++ C TC+K++ E + ++C C
Sbjct: 430 SLSHILENKSLGEE-KPTFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDNC 488
Query: 1016 NRNVPHPKKRFEIFTVSSDKTGPIQIILGDRQVRTIIGMDVDEVD--KTEKG-ENNFPII 1186
+N R+ + SD +G + + + I+G DE+D K++ G EN++ +
Sbjct: 489 QKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLK 548
Query: 1187 LKTMEKQDYTVRLLIKEANIDN 1252
LK + R+ + + +N
Sbjct: 549 LKEATWVPHLFRVSVSQNEYNN 570