BLASTX nr result

ID: Cnidium21_contig00020798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020798
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein A...   160   1e-37
ref|XP_002302627.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_003548419.1| PREDICTED: putative RING-H2 finger protein A...   146   2e-33
ref|XP_002320862.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|XP_003553788.1| PREDICTED: putative RING-H2 finger protein A...   142   2e-32

>ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
           gi|297745433|emb|CBI40513.3| unnamed protein product
           [Vitis vinifera]
          Length = 372

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/111 (68%), Positives = 86/111 (77%)
 Frame = +1

Query: 43  FMCFMDRRRLGVHPNNIQHNSNASAIAPVVAISTPGLDEGTIESYTKVILGESRRLPGPN 222
           F+CF DRRR     N  Q ++ AS  AP    +  GLDE TIESYTKV+LGESRR+PG N
Sbjct: 258 FICFSDRRRDHSRVNAAQQSA-ASLEAPQEPAAMMGLDESTIESYTKVVLGESRRVPGLN 316

Query: 223 NITCPICLSDYHAKETLRCIPECQHCFHADCIDEWLRLKGSCPVCRNSPSP 375
           + TCPICLSDY  KETLRCIP+C HCFHA+CIDEWLR+ GSCPVCRNSPSP
Sbjct: 317 DSTCPICLSDYCTKETLRCIPDCGHCFHAECIDEWLRVNGSCPVCRNSPSP 367


>ref|XP_002302627.1| predicted protein [Populus trichocarpa] gi|222844353|gb|EEE81900.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score =  147 bits (370), Expect = 1e-33
 Identities = 63/98 (64%), Positives = 78/98 (79%)
 Frame = +1

Query: 85  NNIQHNSNASAIAPVVAISTPGLDEGTIESYTKVILGESRRLPGPNNITCPICLSDYHAK 264
           N  Q NS  +A++P   I   GLDE TIES+ K++LGES+RLPGPN  TC ICLS+Y++K
Sbjct: 269 NATQRNSTIAAVSPQPTILVLGLDESTIESFDKLVLGESKRLPGPNGSTCAICLSEYNSK 328

Query: 265 ETLRCIPECQHCFHADCIDEWLRLKGSCPVCRNSPSPA 378
           ET+R IPEC+HCFHADC+DEWLR+  +CPVCR SPSPA
Sbjct: 329 ETVRIIPECKHCFHADCVDEWLRMNSTCPVCRKSPSPA 366


>ref|XP_003548419.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
           max]
          Length = 378

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/112 (60%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
 Frame = +1

Query: 46  MCFMDRRRLGVHPNNIQHNSNASAIAPVVAISTPGLDEGTIESYTKVILGESRRLPGPNN 225
           +C+ DR    +  + I  ++ A+ I+P   I+T GLDE TIESY KV+LGESRR+PGPNN
Sbjct: 259 VCYKDRLA-NIRNSAITRSAPAATISPEPQITTTGLDESTIESYEKVVLGESRRVPGPNN 317

Query: 226 ITCP-ICLSDYHAKETLRCIPECQHCFHADCIDEWLRLKGSCPVCRNSPSPA 378
             C  ICLS+Y++KET+R IPEC+HCFHADCIDEWLR+  +CPVCRNSPSP+
Sbjct: 318 NGCCWICLSEYNSKETIRLIPECKHCFHADCIDEWLRINTTCPVCRNSPSPS 369


>ref|XP_002320862.1| predicted protein [Populus trichocarpa] gi|222861635|gb|EEE99177.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  144 bits (363), Expect = 7e-33
 Identities = 61/96 (63%), Positives = 77/96 (80%)
 Frame = +1

Query: 85  NNIQHNSNASAIAPVVAISTPGLDEGTIESYTKVILGESRRLPGPNNITCPICLSDYHAK 264
           +N Q N+  + ++P   I   GLDE TIES+ K++LGES+RLPGPN  TC ICLS+Y++K
Sbjct: 202 SNTQRNTATATVSPRPTILVMGLDESTIESFDKLVLGESKRLPGPNGSTCAICLSEYNSK 261

Query: 265 ETLRCIPECQHCFHADCIDEWLRLKGSCPVCRNSPS 372
           ETLR IPEC+HCFHADC+DEWLR+ G+CPVCR SPS
Sbjct: 262 ETLRMIPECKHCFHADCVDEWLRMNGTCPVCRKSPS 297


>ref|XP_003553788.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
           max]
          Length = 506

 Score =  142 bits (359), Expect = 2e-32
 Identities = 61/90 (67%), Positives = 75/90 (83%)
 Frame = +1

Query: 103 SNASAIAPVVAISTPGLDEGTIESYTKVILGESRRLPGPNNITCPICLSDYHAKETLRCI 282
           S  SAI+P  +I+T GLD+ TIESY K++LGESRR+PGPN+  C ICLS+Y  K+T+RCI
Sbjct: 405 SEPSAISPQPSIATMGLDDSTIESYQKLVLGESRRVPGPNDGCCTICLSEYKTKDTIRCI 464

Query: 283 PECQHCFHADCIDEWLRLKGSCPVCRNSPS 372
           PEC HCFHA+CIDEWLR+  +CPVCRNSPS
Sbjct: 465 PECAHCFHAECIDEWLRMNSTCPVCRNSPS 494


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