BLASTX nr result
ID: Cnidium21_contig00020791
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00020791
(1138 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin... 429 e-118
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera] 429 e-118
ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2... 413 e-113
ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|2... 413 e-113
ref|XP_002516892.1| nucleic acid binding protein, putative [Rici... 408 e-111
>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
product [Vitis vinifera]
Length = 478
Score = 429 bits (1104), Expect = e-118
Identities = 213/380 (56%), Positives = 247/380 (65%), Gaps = 2/380 (0%)
Frame = -3
Query: 1136 CGYGARCRFNHPRDRNLVVGAMRASGGEYPERVGQPICQYYMRTGMCKFGASCKYHHPRH 957
CGYGARCRFNHPRDR V G +R GGE+PERVGQP+CQ+YM+TG CKFGASCKYHHPR
Sbjct: 64 CGYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQ 123
Query: 956 RHEXXXXXXXXXXXXGYPLRLGEKECSYYLKTGQCKFGMTCKFXXXXXXXXXXXXXXXXX 777
GYPLR GEKECSYY+KTG CKFG TCKF
Sbjct: 124 G--GGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAA 181
Query: 776 XXXXXXXXI-YPTIQSPG-PSSQQYGVVAGNWPVARPALLPGSYIQGSYGPVILPPGMVP 603
YPT+QSP PSSQQYG+V VARP LLP SY G Y PV++PPGMVP
Sbjct: 182 LPAPVPAHTLYPTVQSPSVPSSQQYGLV-----VARPPLLPSSYFHGPYSPVLIPPGMVP 236
Query: 602 MAGWNPYQAPMNPVASPSAHSSLGAGPVYGMPQLSSSIPAYAGPYLSMPSLAGPSGFNQK 423
GW+ Y AP++PVASPS ++G+G +YG+ LS S PAY GPY +PS GPS +QK
Sbjct: 237 FPGWSHYPAPVSPVASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQK 296
Query: 422 DHAFPERPGQPECQHYMKTGECKFGSTCKYHHPPQRSGPNTNFIVSPMGLPLRPGAPLCS 243
+ FPERPGQPECQ+YM+TG+CKFGS+CKYHHPP+ P TN ++SPMGLPLRPGAP C+
Sbjct: 297 EQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCT 356
Query: 242 HYALNGICKFGHSCKFDHXXXXXXXXXXXXXXXXXXXXPYPVGSSMATXXXXXXXXXXXX 63
HYA GICKFG +CKFDH PYPVGSSM T
Sbjct: 357 HYAQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGTLAPSSSSSDLRP 416
Query: 62 XLTSGSSKEAFTTRMLTSVS 3
L SGSSKE+ +TRM +S+S
Sbjct: 417 ELISGSSKESLSTRMSSSMS 436
Score = 86.7 bits (213), Expect = 1e-14
Identities = 46/129 (35%), Positives = 55/129 (42%), Gaps = 46/129 (35%)
Frame = -3
Query: 437 GFNQKDHAFPERP----------------------------------------------G 396
G A+PERP G
Sbjct: 38 GLGGGGEAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTVRPGGGEFPERVG 97
Query: 395 QPECQHYMKTGECKFGSTCKYHHPPQRSGPNTNFIVSPMGLPLRPGAPLCSHYALNGICK 216
QP CQ YMKTG CKFG++CKYHHP Q G + ++ G PLRPG CS+Y G+CK
Sbjct: 98 QPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCK 157
Query: 215 FGHSCKFDH 189
FG +CKF H
Sbjct: 158 FGETCKFHH 166
>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
Length = 518
Score = 429 bits (1102), Expect = e-118
Identities = 213/380 (56%), Positives = 247/380 (65%), Gaps = 2/380 (0%)
Frame = -3
Query: 1136 CGYGARCRFNHPRDRNLVVGAMRASGGEYPERVGQPICQYYMRTGMCKFGASCKYHHPRH 957
CGYGARCRFNHPRDR V G +R GGE+PERVGQP+CQ+YM+TG CKFGASCKYHHPR
Sbjct: 104 CGYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQ 163
Query: 956 RHEXXXXXXXXXXXXGYPLRLGEKECSYYLKTGQCKFGMTCKFXXXXXXXXXXXXXXXXX 777
GYPLR GEKECSYY+KTG CKFG TCKF
Sbjct: 164 G--GGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAA 221
Query: 776 XXXXXXXXI-YPTIQSPG-PSSQQYGVVAGNWPVARPALLPGSYIQGSYGPVILPPGMVP 603
YP +QSP PSSQQYG+V VARP LLP SYI G Y PV++PPGMVP
Sbjct: 222 LPAPVPAHTLYPXVQSPSVPSSQQYGLV-----VARPPLLPSSYIHGPYSPVLIPPGMVP 276
Query: 602 MAGWNPYQAPMNPVASPSAHSSLGAGPVYGMPQLSSSIPAYAGPYLSMPSLAGPSGFNQK 423
GW+ Y AP++PVASPS ++G+G +YG+ LS S PAY GPY +PS GPS +QK
Sbjct: 277 FPGWSHYPAPVSPVASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQK 336
Query: 422 DHAFPERPGQPECQHYMKTGECKFGSTCKYHHPPQRSGPNTNFIVSPMGLPLRPGAPLCS 243
+ FPERPGQPECQ+YM+TG+CKFGS+CKYHHPP+ P TN ++SPMGLPLRPGAP C+
Sbjct: 337 EQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCT 396
Query: 242 HYALNGICKFGHSCKFDHXXXXXXXXXXXXXXXXXXXXPYPVGSSMATXXXXXXXXXXXX 63
HYA GICKFG +CKFDH PYPVGSSM T
Sbjct: 397 HYAQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGTLAPSSSSSDLRP 456
Query: 62 XLTSGSSKEAFTTRMLTSVS 3
L SGSSKE+ +TRM +S+S
Sbjct: 457 ELISGSSKESLSTRMSSSMS 476
Score = 86.7 bits (213), Expect = 1e-14
Identities = 46/129 (35%), Positives = 55/129 (42%), Gaps = 46/129 (35%)
Frame = -3
Query: 437 GFNQKDHAFPERP----------------------------------------------G 396
G A+PERP G
Sbjct: 78 GLGGGGEAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTVRPGGGEFPERVG 137
Query: 395 QPECQHYMKTGECKFGSTCKYHHPPQRSGPNTNFIVSPMGLPLRPGAPLCSHYALNGICK 216
QP CQ YMKTG CKFG++CKYHHP Q G + ++ G PLRPG CS+Y G+CK
Sbjct: 138 QPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCK 197
Query: 215 FGHSCKFDH 189
FG +CKF H
Sbjct: 198 FGETCKFHH 206
>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
predicted protein [Populus trichocarpa]
Length = 477
Score = 413 bits (1061), Expect = e-113
Identities = 203/378 (53%), Positives = 241/378 (63%), Gaps = 2/378 (0%)
Frame = -3
Query: 1136 CGYGARCRFNHPRDRNLVVGAMRASGGEYPERVGQPICQYYMRTGMCKFGASCKYHHPRH 957
CGYGARCR+NHPRDRN V+GA RA G EYPER GQP+CQYYMRTG CKFGASCKYHHP+
Sbjct: 62 CGYGARCRYNHPRDRNAVLGAARAGGAEYPERAGQPLCQYYMRTGTCKFGASCKYHHPKQ 121
Query: 956 RHEXXXXXXXXXXXXGYPLRLGEKECSYYLKTGQCKFGMTCKFXXXXXXXXXXXXXXXXX 777
GYPLR GE+EC+YY+KTGQCKFG TCKF
Sbjct: 122 G--GGSASPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQPGNIQIPAQSLAP 179
Query: 776 XXXXXXXXI-YPTIQSPG-PSSQQYGVVAGNWPVARPALLPGSYIQGSYGPVILPPGMVP 603
YP++QSP PSSQQYGV+ VARP LLPGSY+QG YGPV+L P +VP
Sbjct: 180 QIAPVPGPTLYPSVQSPSVPSSQQYGVM-----VARPPLLPGSYVQGPYGPVLLSPSVVP 234
Query: 602 MAGWNPYQAPMNPVASPSAHSSLGAGPVYGMPQLSSSIPAYAGPYLSMPSLAGPSGFNQK 423
WNPY AP++PVASP+ ++G+G VYGM LS S PAY G + S+P GPS QK
Sbjct: 235 YPSWNPYPAPVSPVASPNTQPAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQK 294
Query: 422 DHAFPERPGQPECQHYMKTGECKFGSTCKYHHPPQRSGPNTNFIVSPMGLPLRPGAPLCS 243
+H FPERPGQPECQ+Y+KTG+CKF S+C+YHHPP+ +N ++SP+GLPLRPGAP CS
Sbjct: 295 EHLFPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCS 354
Query: 242 HYALNGICKFGHSCKFDHXXXXXXXXXXXXXXXXXXXXPYPVGSSMATXXXXXXXXXXXX 63
HY G CKFG +CKFDH PY VGSS+ T
Sbjct: 355 HYTQRGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYLVGSSIGTLAPSSSSSDLRS 414
Query: 62 XLTSGSSKEAFTTRMLTS 9
SG SK++ +TR+ TS
Sbjct: 415 KPISGPSKDSSSTRLSTS 432
Score = 78.6 bits (192), Expect = 3e-12
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = -3
Query: 479 AGPYLSMPSLAGPSGFNQKDHAFPERPGQPECQHYMKTGECKFGSTCKYHHPPQRSGPNT 300
+GP + G + + +PER + +C +Y++TG C +G+ C+Y+HP R+
Sbjct: 22 SGPETGLEEGVWQLGLGETESEYPERSNEQDCMYYLRTGFCGYGARCRYNHPRDRNAVLG 81
Query: 299 NFIVSPMGLPLRPGAPLCSHYALNGICKFGHSCKFDH 189
P R G PLC +Y G CKFG SCK+ H
Sbjct: 82 AARAGGAEYPERAGQPLCQYYMRTGTCKFGASCKYHH 118
>ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|222863502|gb|EEF00633.1|
predicted protein [Populus trichocarpa]
Length = 456
Score = 413 bits (1061), Expect = e-113
Identities = 204/380 (53%), Positives = 247/380 (65%), Gaps = 2/380 (0%)
Frame = -3
Query: 1136 CGYGARCRFNHPRDRNLVVGAMRASGGEYPERVGQPICQYYMRTGMCKFGASCKYHHPRH 957
CGYGARCR+NHPRDR V+GA RA GGE+PERVGQP+CQYYMRTG CKFGASCKY+HP+
Sbjct: 62 CGYGARCRYNHPRDRTAVLGAARAGGGEFPERVGQPLCQYYMRTGTCKFGASCKYNHPKQ 121
Query: 956 RHEXXXXXXXXXXXXGYPLRLGEKECSYYLKTGQCKFGMTCKFXXXXXXXXXXXXXXXXX 777
YPLR GE+EC+YY+KTGQCKFG TCKF
Sbjct: 122 GGSSVRPVSLNYYG--YPLRPGERECTYYIKTGQCKFGATCKFHHPQPANMQIPAQSLAP 179
Query: 776 XXXXXXXXI-YPTIQSPG-PSSQQYGVVAGNWPVARPALLPGSYIQGSYGPVILPPGMVP 603
YPT+QSP PSSQQYGV+ VARP LLPGSY+QG YGPV+L P +VP
Sbjct: 180 QVASVPAHTLYPTMQSPSVPSSQQYGVM-----VARPPLLPGSYVQGPYGPVLLSPSLVP 234
Query: 602 MAGWNPYQAPMNPVASPSAHSSLGAGPVYGMPQLSSSIPAYAGPYLSMPSLAGPSGFNQK 423
W+PY AP++PVASP+A ++G+G VYG+ LS S PAY G Y S+P+ GPS +QK
Sbjct: 235 YPSWSPYPAPVSPVASPNAQPAVGSGSVYGISPLSPSAPAYTGAYQSIPTAKGPSSSSQK 294
Query: 422 DHAFPERPGQPECQHYMKTGECKFGSTCKYHHPPQRSGPNTNFIVSPMGLPLRPGAPLCS 243
+H FPERPGQPECQ+YMKTG+CKF S+C+YHHPP+ TN ++SPMGLPLRPGAP C+
Sbjct: 295 EHVFPERPGQPECQYYMKTGDCKFESSCRYHHPPELVTSKTNVVLSPMGLPLRPGAPTCT 354
Query: 242 HYALNGICKFGHSCKFDHXXXXXXXXXXXXXXXXXXXXPYPVGSSMATXXXXXXXXXXXX 63
HY +G CKFG +CKFDH PYPVGSS+ T
Sbjct: 355 HYTQHGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYPVGSSIGT----LAPSSSSS 410
Query: 62 XLTSGSSKEAFTTRMLTSVS 3
+ S SK++ +TR+ +S S
Sbjct: 411 DMRSKPSKDSSSTRLSSSTS 430
Score = 78.2 bits (191), Expect = 4e-12
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = -3
Query: 428 QKDHAFPERPGQPECQHYMKTGECKFGSTCKYHHPPQRSGPNTNFIVSPMGLPLRPGAPL 249
+ + +PERP + +C +Y++TG C +G+ C+Y+HP R+ P R G PL
Sbjct: 39 ETESEYPERPNEQDCMYYLRTGFCGYGARCRYNHPRDRTAVLGAARAGGGEFPERVGQPL 98
Query: 248 CSHYALNGICKFGHSCKFDH 189
C +Y G CKFG SCK++H
Sbjct: 99 CQYYMRTGTCKFGASCKYNH 118
>ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223543980|gb|EEF45506.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 481
Score = 408 bits (1048), Expect = e-111
Identities = 208/385 (54%), Positives = 248/385 (64%), Gaps = 7/385 (1%)
Frame = -3
Query: 1136 CGYGARCRFNHPRDRNLVVGAMRASGGEYPERVGQPICQYYMRTGMCKFGASCKYHHPRH 957
CGYG+RCRFNHPRDR V+GA RA E+PERVGQP+CQYYMRTG CKFGASCKYHHP+
Sbjct: 62 CGYGSRCRFNHPRDRGAVLGAARAGAAEFPERVGQPVCQYYMRTGTCKFGASCKYHHPKQ 121
Query: 956 RHEXXXXXXXXXXXXGYPLRLGEKECSYYLKTGQCKFGMTCKFXXXXXXXXXXXXXXXXX 777
GYPLR GEKEC+YY+KTGQCKFG+TCKF
Sbjct: 122 G--GGSANPVSLNYYGYPLRPGEKECTYYVKTGQCKFGVTCKFHHPQPANLQIQAQSPAL 179
Query: 776 XXXXXXXXI-----YPTIQSPG-PSSQQYGVVAGNWPVARPALLPGSYIQGSYGPVILPP 615
+ YP +QSP PS+QQYG+V VARP LLPGSY+QG YGP+++ P
Sbjct: 180 QVAPVPAPVPASALYPNVQSPSVPSTQQYGLV-----VARPPLLPGSYVQGPYGPMLVSP 234
Query: 614 GMVPMAGWNPYQAPMNPVASPSAHSSLGAGPVYGMPQLSSSIPAYAGPYLSMPSLAGPSG 435
G+VP W+PY P++PVASPS +G+G VYG+ QLS S PAY G Y +MPS +
Sbjct: 235 GVVPYPSWSPYPGPISPVASPSTQLGVGSG-VYGITQLSPSAPAYTGGYQAMPSSS---- 289
Query: 434 FNQKDH-AFPERPGQPECQHYMKTGECKFGSTCKYHHPPQRSGPNTNFIVSPMGLPLRPG 258
NQK+ +FPERPGQPECQ+YMKTG+CKFGS+CKYHHPP+ P TN ++SPMGLPLRPG
Sbjct: 290 -NQKEQPSFPERPGQPECQYYMKTGDCKFGSSCKYHHPPELIAPKTNVVLSPMGLPLRPG 348
Query: 257 APLCSHYALNGICKFGHSCKFDHXXXXXXXXXXXXXXXXXXXXPYPVGSSMATXXXXXXX 78
AP C+HY G CKFG +CKFDH PYPVGSSM T
Sbjct: 349 APHCTHYTQRGQCKFGPACKFDHPMGSLSYSPSASSLSDMPVAPYPVGSSMGTLAPSSSS 408
Query: 77 XXXXXXLTSGSSKEAFTTRMLTSVS 3
L SGSSK++ +TRM +S+S
Sbjct: 409 SELRPELVSGSSKDSSSTRMSSSMS 433
Score = 76.6 bits (187), Expect = 1e-11
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = -3
Query: 437 GFNQKDHAFPERPGQPECQHYMKTGECKFGSTCKYHHPPQRSGPNTNFIVSPMGLPLRPG 258
G + + +PERP + +C +Y++TG C +GS C+++HP R P R G
Sbjct: 36 GLGEVEPGYPERPEEADCIYYLRTGFCGYGSRCRFNHPRDRGAVLGAARAGAAEFPERVG 95
Query: 257 APLCSHYALNGICKFGHSCKFDH 189
P+C +Y G CKFG SCK+ H
Sbjct: 96 QPVCQYYMRTGTCKFGASCKYHH 118