BLASTX nr result
ID: Cnidium21_contig00020779
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00020779
(952 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g... 320 2e-85
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g... 307 3e-81
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 302 7e-80
ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 273 4e-71
ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif... 262 8e-68
>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
gi|222850098|gb|EEE87645.1| f-box family protein
[Populus trichocarpa]
Length = 410
Score = 320 bits (821), Expect = 2e-85
Identities = 167/322 (51%), Positives = 220/322 (68%), Gaps = 5/322 (1%)
Frame = +2
Query: 2 MAEWCNLPRELLDLISKHLDSSIDLLRFRSVCTCWRXXXXXXXXXXXXR-FPILPNNGIS 178
MAEW +LP++L++LISK LD+S DLLRFRSVC WR F ILPN+GIS
Sbjct: 1 MAEWTHLPKDLIELISKCLDTSTDLLRFRSVCNSWRSSIPPKSPRLSSNTFKILPNDGIS 60
Query: 179 DTTWGFYLFKRSIFLIQLPPPHFNSP--SWVIKIDQDNPQKCHLFNPLSRDEYKPLTHDF 352
T++GF LFKRSIFLI LP H + W++KI++D P K HLF+PLSR L H
Sbjct: 61 HTSFGFSLFKRSIFLIGLPNSHNQTDLQGWLVKIEEDVPGKKHLFDPLSRCRSTSLHHSL 120
Query: 353 PRVLDFMGLRVFELGKEFTLQYINYRPFATSIGDAGNLYSEKVAFCDVGCGGGYVILTIH 532
PRVLD M LR+ ELG E+ L +++Y+P ++S DAGNLY EKV + C +V+LTIH
Sbjct: 121 PRVLDLMNLRIRELGHEYVLHHVSYKPNSSSFTDAGNLYMEKVVMIWLNCETEFVLLTIH 180
Query: 533 VSGRLALLKSGDVKWTVIEDMPSPYDDVIFYKGCFYAVDSTGRSVMVDVGSESVTVRFVA 712
VSG+LA+ KSGD +WT+I +MPSP+DDVI YKG FYAVD+TGR+V+V + ++ + V
Sbjct: 181 VSGKLAMFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVVALDTD---LGLVG 237
Query: 713 DSVFGGDTKMLVDGCGELFMVDKFLSVGAXXXXXXXXXXXXXC--YMSERTVRFEVYKLD 886
D VFGGD K LV+ G+L +VD +LS+ YMSERTVRF+V+KL+
Sbjct: 238 DPVFGGDKKYLVESKGDLLLVDMYLSIDTDEGLSIGNDVVQDLVQYMSERTVRFKVFKLN 297
Query: 887 KSGDKWIKVENLGDRIIFLGDN 952
+ G WI+V+NL DR++FLGD+
Sbjct: 298 EEGKSWIEVKNLEDRVLFLGDD 319
>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
gi|222848503|gb|EEE86050.1| f-box family protein
[Populus trichocarpa]
Length = 469
Score = 307 bits (786), Expect = 3e-81
Identities = 161/322 (50%), Positives = 218/322 (67%), Gaps = 5/322 (1%)
Frame = +2
Query: 2 MAEWCNLPRELLDLISKHLDSSIDLLRFRSVCTCWRXXXXXXXXXXXXR-FPILPNNGIS 178
MAEW +LP++L++LISK LD+S DLLRFRSVC WR F ILPN+GIS
Sbjct: 1 MAEWTHLPKDLMELISKRLDTSTDLLRFRSVCNSWRSSIPPEPPCLSSNTFKILPNDGIS 60
Query: 179 DTTWGFYLFKRSIFLIQLPPPH--FNSPSWVIKIDQDNPQKCHLFNPLSRDEYKPLTHDF 352
T++GF LFKR++FL+ LP H ++ W+IKI++D P K HLF+PLSR L ++
Sbjct: 61 HTSFGFSLFKRTVFLVGLPNSHNQTDTQGWLIKIEEDVPGKKHLFDPLSRCRSTSLPNNL 120
Query: 353 PRVLDFMGLRVFELGKEFTLQYINYRPFATSIGDAGNLYSEKVAFCDVGCGGGYVILTIH 532
PRVLD M LR+ ELG E+ L ++NY+P ++S DAGNLY EKV + +V+LTIH
Sbjct: 121 PRVLDLMNLRIRELGHEYVLHHLNYKPNSSSFTDAGNLYMEKVVMIWLNSLTEFVLLTIH 180
Query: 533 VSGRLALLKSGDVKWTVIEDMPSPYDDVIFYKGCFYAVDSTGRSVMVDVGSESVTVRFVA 712
VSG+LA+ KSGD +WT+I +MPSP+DDVI YKG FYAVD+TGR+V+V + + V
Sbjct: 181 VSGKLAIFKSGDKRWTIINEMPSPFDDVIVYKGRFYAVDNTGRTVVV---AMDTNLGLVG 237
Query: 713 DSVFGGDTKMLVDGCGELFMVDKFLSVGAXXXXXXXXXXXXXC--YMSERTVRFEVYKLD 886
+ VFGGD K LV+ G+L +VD +LS+ + YMSERTV F+V+KL+
Sbjct: 238 NPVFGGDKKYLVESKGDLLLVDMYLSIDSDEGLSIGHDVVQDLVQYMSERTVWFKVFKLN 297
Query: 887 KSGDKWIKVENLGDRIIFLGDN 952
+ G WI+V +L DR++FLGD+
Sbjct: 298 EEGKCWIEVNDLEDRVLFLGDD 319
>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
vinifera]
Length = 387
Score = 302 bits (774), Expect = 7e-80
Identities = 157/320 (49%), Positives = 209/320 (65%), Gaps = 3/320 (0%)
Frame = +2
Query: 2 MAEWCNLPRELLDLISKHLDSSIDLLRFRSVCTCWRXXXXXXXXXXXXRFPILPNNGISD 181
MAEW NLPR+LL LI+K LDS DLLRFRSVC+ WR PILP G S+
Sbjct: 1 MAEWANLPRDLLHLIAKRLDSHFDLLRFRSVCSSWRSSTPSKPRSIFSHLPILPTTGFSE 60
Query: 182 TTWGFYLFKRSIFLIQLPPPHFNSP--SWVIKIDQDNPQKCHLFNPLSRDEYKPLTHDFP 355
TW FYL KRSI + LP + SW+IKI++D L NPL+ +++ L DFP
Sbjct: 61 ITWAFYLSKRSILQLGLPDSRAQTTPNSWLIKIEEDPSGVIRLINPLTTFKFRHLPPDFP 120
Query: 356 RVLDFMGLRVFELGKEFTLQYINYRPFATSIGDAGNLYSEKVAFCDVGCGGGYVILTIHV 535
+ DF GLRVFELG+E+ L+Y++YRP + G+LY EKVAFC G G + +LTIH+
Sbjct: 121 KTFDFSGLRVFELGQEYVLEYMDYRPPGNAY--LGSLYMEKVAFCS-GNGDDFWLLTIHL 177
Query: 536 SGRLALLKSGDVKWTVIEDMPSPYDDVIFYKGCFYAVDSTGRSVMVDVG-SESVTVRFVA 712
SG+LA+ +SGD KW +I+DM SPYDDVIF+ G FYAVD+TGR+V+VDV S V A
Sbjct: 178 SGKLAMFRSGDKKWMIIDDMQSPYDDVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNLAA 237
Query: 713 DSVFGGDTKMLVDGCGELFMVDKFLSVGAXXXXXXXXXXXXXCYMSERTVRFEVYKLDKS 892
SVFGGD K+LV+ GEL +VD + ++ +M ER + F+V++LD+
Sbjct: 238 SSVFGGDKKVLVESEGELLLVDTYFTM-------YHDDDEHVRWMIERMIHFKVFRLDQR 290
Query: 893 GDKWIKVENLGDRIIFLGDN 952
KW+++E+LGDR++FLGD+
Sbjct: 291 EQKWVEIESLGDRLLFLGDD 310
>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 394
Score = 273 bits (698), Expect = 4e-71
Identities = 145/318 (45%), Positives = 200/318 (62%), Gaps = 2/318 (0%)
Frame = +2
Query: 2 MAEWCNLPRELLDLISKHLDSSIDLLRFRSVCTCWRXXXXXXXXXXXXRFPILPNNGISD 181
MA W LP++LL LI++ L+S DLL RSVC+ W RFPILP NG
Sbjct: 1 MARWSQLPKDLLLLIAQRLNSHFDLLCLRSVCSSWHACVPSRLHPLPSRFPILPTNG--- 57
Query: 182 TTWGFYLFKRSIFLIQLPPPHFNSP--SWVIKIDQDNPQKCHLFNPLSRDEYKPLTHDFP 355
T+WG YL +R+I + LP H SW+IK+++D P HL NPLS ++K L +FP
Sbjct: 58 TSWGLYLSRRTILCLGLPESHCQPTISSWLIKVEEDVPDMAHLVNPLSTFQFKHLPPNFP 117
Query: 356 RVLDFMGLRVFELGKEFTLQYINYRPFATSIGDAGNLYSEKVAFCDVGCGGGYVILTIHV 535
+ DF RV ELG+E+ LQY+N+RP + D G+L+ KVAF G G +V++TIHV
Sbjct: 118 KTFDFSRFRVSELGQEYVLQYMNHRPSGEA--DEGSLHKGKVAFSSTGNGEDFVMITIHV 175
Query: 536 SGRLALLKSGDVKWTVIEDMPSPYDDVIFYKGCFYAVDSTGRSVMVDVGSESVTVRFVAD 715
SG+LA+ + G+ + +I D PSP DD+IF+ G FYA+D+TGR+V+V +GS V + +AD
Sbjct: 176 SGKLAMFRHGNKRLILINDTPSPCDDLIFFNGEFYAIDNTGRTVVVAIGSPPV-LSLIAD 234
Query: 716 SVFGGDTKMLVDGCGELFMVDKFLSVGAXXXXXXXXXXXXXCYMSERTVRFEVYKLDKSG 895
SVFGGD K LV+ GEL MVD + G +R VRF+V+KLD+ G
Sbjct: 235 SVFGGDKKSLVESNGELLMVDTYFGQGIHR-------------RMKRAVRFKVFKLDQIG 281
Query: 896 DKWIKVENLGDRIIFLGD 949
W++VE+LG+RI+FLG+
Sbjct: 282 HMWVEVESLGNRILFLGE 299
>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
Length = 375
Score = 262 bits (670), Expect = 8e-68
Identities = 143/318 (44%), Positives = 198/318 (62%), Gaps = 2/318 (0%)
Frame = +2
Query: 2 MAEWCNLPRELLDLISKHLDSSIDLLRFRSVCTCWRXXXXXXXXXXXXRFPILPNNGISD 181
MA W LP++LL LI++ L++ DLL RSVC+ W RFPILP NG
Sbjct: 1 MARWSQLPKDLLLLIAQRLNTHFDLLCLRSVCSSWHACVPSRPHPLPSRFPILPTNG--- 57
Query: 182 TTWGFYLFKRSIFLIQLPPPHFNSP--SWVIKIDQDNPQKCHLFNPLSRDEYKPLTHDFP 355
T+WG YL +R+I + LP H SW+IK+++D P HL NPLS ++K L +FP
Sbjct: 58 TSWGLYLSRRTILCLGLPESHCQPTIGSWLIKVEEDVPDMAHLVNPLSTFQFKHLPPNFP 117
Query: 356 RVLDFMGLRVFELGKEFTLQYINYRPFATSIGDAGNLYSEKVAFCDVGCGGGYVILTIHV 535
+ DF RV ELG+E+ LQY+N+RP + D G+L+ KVAF G +V+LTIHV
Sbjct: 118 KTFDFSRFRVSELGQEYVLQYMNHRP--SGEADEGSLHKGKVAFSSTSNGEDFVMLTIHV 175
Query: 536 SGRLALLKSGDVKWTVIEDMPSPYDDVIFYKGCFYAVDSTGRSVMVDVGSESVTVRFVAD 715
SG+LA+ + G+ + I+DMPS DD+IF+ G FYAVD+TGR+V+V +GS V + +AD
Sbjct: 176 SGKLAMFRHGNKRLKTIDDMPS-CDDLIFFNGEFYAVDNTGRTVVVAIGSPPV-LSLIAD 233
Query: 716 SVFGGDTKMLVDGCGELFMVDKFLSVGAXXXXXXXXXXXXXCYMSERTVRFEVYKLDKSG 895
SV GG+ K LV+ GEL MV+ + G + R VRF+V+KL++ G
Sbjct: 234 SVIGGNKKSLVESNGELLMVNTYFDQGIHG-------------IMNRAVRFKVFKLNQIG 280
Query: 896 DKWIKVENLGDRIIFLGD 949
W++VENLGDRI+FLG+
Sbjct: 281 HMWVEVENLGDRILFLGE 298