BLASTX nr result

ID: Cnidium21_contig00020769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020769
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513360.1| ccaat-binding transcription factor, putative...    68   5e-15
ref|XP_004155463.1| PREDICTED: nuclear transcription factor Y su...    66   2e-14
ref|XP_004136852.1| PREDICTED: nuclear transcription factor Y su...    66   2e-14
ref|XP_002307183.1| predicted protein [Populus trichocarpa] gi|2...    66   2e-14
ref|XP_003531484.1| PREDICTED: nuclear transcription factor Y su...    65   6e-14

>ref|XP_002513360.1| ccaat-binding transcription factor, putative [Ricinus communis]
           gi|223547268|gb|EEF48763.1| ccaat-binding transcription
           factor, putative [Ricinus communis]
          Length = 272

 Score = 68.2 bits (165), Expect(2) = 5e-15
 Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
 Frame = -3

Query: 332 STYQQAQHLLTY*QAQHLEHVRER-----LRLFWATQMQEMKPA-DFKKHSLLLSPISRI 171
           S++  + H LTY QAQH  H +++     L++FWA QMQE++   DFK HSL L+ I +I
Sbjct: 58  SSFSNSPHQLTYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTMDFKNHSLPLARIKKI 117

Query: 170 MKADIDVRMFAKES 129
           MKAD DVRM + E+
Sbjct: 118 MKADEDVRMISAEA 131



 Score = 37.4 bits (85), Expect(2) = 5e-15
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -2

Query: 132 ECSIVLAKASEMFILDMTTRAWINT*EASGSVPEKP--AAAVS 10
           E  ++ AKA EMFIL++T R+WI+T E      +K   AAA+S
Sbjct: 130 EAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAIS 172


>ref|XP_004155463.1| PREDICTED: nuclear transcription factor Y subunit C-9-like isoform
           1 [Cucumis sativus] gi|449478957|ref|XP_004155464.1|
           PREDICTED: nuclear transcription factor Y subunit
           C-9-like isoform 2 [Cucumis sativus]
          Length = 266

 Score = 66.2 bits (160), Expect(2) = 2e-14
 Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
 Frame = -3

Query: 332 STYQQAQHLLTY*QAQHLEHVRER-----LRLFWATQMQEMKPA-DFKKHSLLLSPISRI 171
           S++  + H L Y QAQH  H +++     L++FWA QMQE++   DFK HSL L+ I +I
Sbjct: 53  SSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKI 112

Query: 170 MKADIDVRMFAKES 129
           MKAD DVRM + E+
Sbjct: 113 MKADEDVRMISAEA 126



 Score = 37.4 bits (85), Expect(2) = 2e-14
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -2

Query: 132 ECSIVLAKASEMFILDMTTRAWINT*EASGSVPEKP--AAAVS 10
           E  ++ AKA EMFIL++T R+WI+T E      +K   AAA+S
Sbjct: 125 EAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAIS 167


>ref|XP_004136852.1| PREDICTED: nuclear transcription factor Y subunit C-9-like isoform
           1 [Cucumis sativus] gi|449438151|ref|XP_004136853.1|
           PREDICTED: nuclear transcription factor Y subunit
           C-9-like isoform 2 [Cucumis sativus]
          Length = 266

 Score = 66.2 bits (160), Expect(2) = 2e-14
 Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
 Frame = -3

Query: 332 STYQQAQHLLTY*QAQHLEHVRER-----LRLFWATQMQEMKPA-DFKKHSLLLSPISRI 171
           S++  + H L Y QAQH  H +++     L++FWA QMQE++   DFK HSL L+ I +I
Sbjct: 53  SSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKI 112

Query: 170 MKADIDVRMFAKES 129
           MKAD DVRM + E+
Sbjct: 113 MKADEDVRMISAEA 126



 Score = 37.4 bits (85), Expect(2) = 2e-14
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -2

Query: 132 ECSIVLAKASEMFILDMTTRAWINT*EASGSVPEKP--AAAVS 10
           E  ++ AKA EMFIL++T R+WI+T E      +K   AAA+S
Sbjct: 125 EAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAIS 167


>ref|XP_002307183.1| predicted protein [Populus trichocarpa] gi|222856632|gb|EEE94179.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 66.2 bits (160), Expect(2) = 2e-14
 Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
 Frame = -3

Query: 332 STYQQAQHLLTY*QAQHLEHVRER--LRLFWATQMQEMKPA-DFKKHSLLLSPISRIMKA 162
           +T+  + H LTY QAQH  H +++  L++FW  QM E++   DFK HSL L+ I +IMKA
Sbjct: 40  ATFSNSPHQLTYQQAQHFHHQQQQQQLQMFWTNQMHEIEQTTDFKNHSLPLARIKKIMKA 99

Query: 161 DIDVRMFAKES 129
           D DVRM + E+
Sbjct: 100 DEDVRMISAEA 110



 Score = 37.4 bits (85), Expect(2) = 2e-14
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -2

Query: 132 ECSIVLAKASEMFILDMTTRAWINT*EASGSVPEKP--AAAVS 10
           E  ++ AKA EMFIL++T R+WI+T E      +K   AAA+S
Sbjct: 109 EAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAIS 151


>ref|XP_003531484.1| PREDICTED: nuclear transcription factor Y subunit C-9-like [Glycine
           max]
          Length = 271

 Score = 64.7 bits (156), Expect(2) = 6e-14
 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
 Frame = -3

Query: 359 STPQAILGYSTYQQAQHLLTY*QAQHL-----EHVRERLRLFWATQMQEMKPA-DFKKHS 198
           + P      + +  + H L Y QAQH      +H +++L++FW+ QMQE++   DFK HS
Sbjct: 47  TAPSPTQAPAAFSSSAHQLAYQQAQHFHHQQQQHQQQQLQMFWSNQMQEIEQTIDFKNHS 106

Query: 197 LLLSPISRIMKADIDVRMFAKES 129
           L L+ I +IMKAD DVRM + E+
Sbjct: 107 LPLARIKKIMKADEDVRMISAEA 129



 Score = 37.4 bits (85), Expect(2) = 6e-14
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -2

Query: 132 ECSIVLAKASEMFILDMTTRAWINT*EASGSVPEKP--AAAVS 10
           E  ++ AKA EMFIL++T R+WI+T E      +K   AAA+S
Sbjct: 128 EAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAIS 170


Top