BLASTX nr result
ID: Cnidium21_contig00020686
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00020686 (475 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus commun... 54 2e-14 ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis ... 52 3e-12 emb|CBI34713.3| unnamed protein product [Vitis vinifera] 52 3e-12 ref|XP_002303565.1| GRAS family transcription factor [Populus tr... 50 5e-12 ref|XP_002299559.1| GRAS family transcription factor [Populus tr... 49 3e-11 >ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus communis] gi|223549613|gb|EEF51101.1| DELLA protein RGL1, putative [Ricinus communis] Length = 662 Score = 53.9 bits (128), Expect(2) = 2e-14 Identities = 23/35 (65%), Positives = 27/35 (77%) Frame = -2 Query: 474 KNIVACEDCDRLERHKSFGMWIKSTEQGGFRCISL 370 +NIVACE DRLERH+SF W K EQGGFRC+ + Sbjct: 566 RNIVACEGSDRLERHESFEKWRKLMEQGGFRCMGI 600 Score = 49.7 bits (117), Expect(2) = 2e-14 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 7/47 (14%) Frame = -3 Query: 320 ACDDYH-------SALTLSWLD*PFYTILAWSPDDVGGRSSLYWRPS 201 +C+DY +ALTLSWLD P YTI AW+P DV G SS + +PS Sbjct: 616 SCEDYRVKERQDRAALTLSWLDQPLYTISAWAPVDVVGSSSSFSQPS 662 >ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis vinifera] Length = 676 Score = 52.4 bits (124), Expect(2) = 3e-12 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = -2 Query: 474 KNIVACEDCDRLERHKSFGMWIKSTEQGGFRCISL 370 +NI+ACE DR+ERH+SF W + EQGGFRC+ + Sbjct: 580 RNIIACEGSDRVERHESFEKWRRRMEQGGFRCVGI 614 Score = 43.9 bits (102), Expect(2) = 3e-12 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 7/47 (14%) Frame = -3 Query: 320 ACDDYH-------SALTLSWLD*PFYTILAWSPDDVGGRSSLYWRPS 201 +C++Y +ALTLSWLD P YT+ AW+ DV G SS + PS Sbjct: 630 SCENYSVSKRGQDAALTLSWLDQPLYTVSAWTQVDVAGSSSSFSLPS 676 >emb|CBI34713.3| unnamed protein product [Vitis vinifera] Length = 150 Score = 52.4 bits (124), Expect(2) = 3e-12 Identities = 20/35 (57%), Positives = 27/35 (77%) Frame = -2 Query: 474 KNIVACEDCDRLERHKSFGMWIKSTEQGGFRCISL 370 +NI+ACE DR+ERH+SF W + EQGGFRC+ + Sbjct: 54 RNIIACEGSDRVERHESFEKWRRRMEQGGFRCVGI 88 Score = 43.9 bits (102), Expect(2) = 3e-12 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 7/47 (14%) Frame = -3 Query: 320 ACDDYH-------SALTLSWLD*PFYTILAWSPDDVGGRSSLYWRPS 201 +C++Y +ALTLSWLD P YT+ AW+ DV G SS + PS Sbjct: 104 SCENYSVSKRGQDAALTLSWLDQPLYTVSAWTQVDVAGSSSSFSLPS 150 >ref|XP_002303565.1| GRAS family transcription factor [Populus trichocarpa] gi|222840997|gb|EEE78544.1| GRAS family transcription factor [Populus trichocarpa] Length = 665 Score = 49.7 bits (117), Expect(2) = 5e-12 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = -2 Query: 474 KNIVACEDCDRLERHKSFGMWIKSTEQGGFRCISL 370 +N+VACE DR ERH+SF W K EQGG RC+ + Sbjct: 568 RNVVACEGSDRHERHESFDKWKKLMEQGGLRCVGI 602 Score = 45.8 bits (107), Expect(2) = 5e-12 Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 8/47 (17%) Frame = -3 Query: 320 ACDDY--------HSALTLSWLD*PFYTILAWSPDDVGGRSSLYWRP 204 +CD Y +ALTLSWLD P YT+ AW+P D+ G S+ + +P Sbjct: 618 SCDSYKVKKQGHEEAALTLSWLDQPLYTVSAWTPLDIAGSSTSFSQP 664 >ref|XP_002299559.1| GRAS family transcription factor [Populus trichocarpa] gi|222846817|gb|EEE84364.1| GRAS family transcription factor [Populus trichocarpa] Length = 666 Score = 48.5 bits (114), Expect(2) = 3e-11 Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 8/48 (16%) Frame = -3 Query: 320 ACDDYH--------SALTLSWLD*PFYTILAWSPDDVGGRSSLYWRPS 201 +CD Y +ALTLSWLD P YT+ AW+P D+ G SS + +PS Sbjct: 619 SCDSYQVKKHGQEGAALTLSWLDQPLYTVSAWTPLDIAGSSSSFSQPS 666 Score = 44.3 bits (103), Expect(2) = 3e-11 Identities = 19/33 (57%), Positives = 22/33 (66%) Frame = -2 Query: 474 KNIVACEDCDRLERHKSFGMWIKSTEQGGFRCI 376 +NIVACE DR ERH+ W K EQGG RC+ Sbjct: 569 RNIVACEGSDRHERHEMLDNWKKLMEQGGLRCL 601