BLASTX nr result

ID: Cnidium21_contig00020686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020686
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus commun...    54   2e-14
ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis ...    52   3e-12
emb|CBI34713.3| unnamed protein product [Vitis vinifera]               52   3e-12
ref|XP_002303565.1| GRAS family transcription factor [Populus tr...    50   5e-12
ref|XP_002299559.1| GRAS family transcription factor [Populus tr...    49   3e-11

>ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223549613|gb|EEF51101.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 662

 Score = 53.9 bits (128), Expect(2) = 2e-14
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = -2

Query: 474 KNIVACEDCDRLERHKSFGMWIKSTEQGGFRCISL 370
           +NIVACE  DRLERH+SF  W K  EQGGFRC+ +
Sbjct: 566 RNIVACEGSDRLERHESFEKWRKLMEQGGFRCMGI 600



 Score = 49.7 bits (117), Expect(2) = 2e-14
 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 7/47 (14%)
 Frame = -3

Query: 320 ACDDYH-------SALTLSWLD*PFYTILAWSPDDVGGRSSLYWRPS 201
           +C+DY        +ALTLSWLD P YTI AW+P DV G SS + +PS
Sbjct: 616 SCEDYRVKERQDRAALTLSWLDQPLYTISAWAPVDVVGSSSSFSQPS 662


>ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis vinifera]
          Length = 676

 Score = 52.4 bits (124), Expect(2) = 3e-12
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = -2

Query: 474 KNIVACEDCDRLERHKSFGMWIKSTEQGGFRCISL 370
           +NI+ACE  DR+ERH+SF  W +  EQGGFRC+ +
Sbjct: 580 RNIIACEGSDRVERHESFEKWRRRMEQGGFRCVGI 614



 Score = 43.9 bits (102), Expect(2) = 3e-12
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
 Frame = -3

Query: 320 ACDDYH-------SALTLSWLD*PFYTILAWSPDDVGGRSSLYWRPS 201
           +C++Y        +ALTLSWLD P YT+ AW+  DV G SS +  PS
Sbjct: 630 SCENYSVSKRGQDAALTLSWLDQPLYTVSAWTQVDVAGSSSSFSLPS 676


>emb|CBI34713.3| unnamed protein product [Vitis vinifera]
          Length = 150

 Score = 52.4 bits (124), Expect(2) = 3e-12
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = -2

Query: 474 KNIVACEDCDRLERHKSFGMWIKSTEQGGFRCISL 370
           +NI+ACE  DR+ERH+SF  W +  EQGGFRC+ +
Sbjct: 54  RNIIACEGSDRVERHESFEKWRRRMEQGGFRCVGI 88



 Score = 43.9 bits (102), Expect(2) = 3e-12
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
 Frame = -3

Query: 320 ACDDYH-------SALTLSWLD*PFYTILAWSPDDVGGRSSLYWRPS 201
           +C++Y        +ALTLSWLD P YT+ AW+  DV G SS +  PS
Sbjct: 104 SCENYSVSKRGQDAALTLSWLDQPLYTVSAWTQVDVAGSSSSFSLPS 150


>ref|XP_002303565.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222840997|gb|EEE78544.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 665

 Score = 49.7 bits (117), Expect(2) = 5e-12
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = -2

Query: 474 KNIVACEDCDRLERHKSFGMWIKSTEQGGFRCISL 370
           +N+VACE  DR ERH+SF  W K  EQGG RC+ +
Sbjct: 568 RNVVACEGSDRHERHESFDKWKKLMEQGGLRCVGI 602



 Score = 45.8 bits (107), Expect(2) = 5e-12
 Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
 Frame = -3

Query: 320 ACDDY--------HSALTLSWLD*PFYTILAWSPDDVGGRSSLYWRP 204
           +CD Y         +ALTLSWLD P YT+ AW+P D+ G S+ + +P
Sbjct: 618 SCDSYKVKKQGHEEAALTLSWLDQPLYTVSAWTPLDIAGSSTSFSQP 664


>ref|XP_002299559.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846817|gb|EEE84364.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 666

 Score = 48.5 bits (114), Expect(2) = 3e-11
 Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 8/48 (16%)
 Frame = -3

Query: 320 ACDDYH--------SALTLSWLD*PFYTILAWSPDDVGGRSSLYWRPS 201
           +CD Y         +ALTLSWLD P YT+ AW+P D+ G SS + +PS
Sbjct: 619 SCDSYQVKKHGQEGAALTLSWLDQPLYTVSAWTPLDIAGSSSSFSQPS 666



 Score = 44.3 bits (103), Expect(2) = 3e-11
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = -2

Query: 474 KNIVACEDCDRLERHKSFGMWIKSTEQGGFRCI 376
           +NIVACE  DR ERH+    W K  EQGG RC+
Sbjct: 569 RNIVACEGSDRHERHEMLDNWKKLMEQGGLRCL 601


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