BLASTX nr result

ID: Cnidium21_contig00020620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020620
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513258.1| conserved hypothetical protein [Ricinus comm...    39   3e-06
ref|XP_004147319.1| PREDICTED: DDT domain-containing protein DDB...    40   5e-06
ref|XP_004173906.1| PREDICTED: DDT domain-containing protein DDB...    40   5e-06
ref|XP_002873374.1| DDT domain-containing protein [Arabidopsis l...    40   6e-06
emb|CBI21659.3| unnamed protein product [Vitis vinifera]               41   8e-06

>ref|XP_002513258.1| conserved hypothetical protein [Ricinus communis]
           gi|223547632|gb|EEF49126.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 718

 Score = 39.3 bits (90), Expect(3) = 3e-06
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +3

Query: 87  FRRNSKIYVKSSDSTQWGYYSSKYEVLSL 173
           FRR+ +I+++SSDS  WGYYS K E+ +L
Sbjct: 615 FRRDGRIFIESSDSKLWGYYSGKEELDAL 643



 Score = 34.3 bits (77), Expect(3) = 3e-06
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +1

Query: 4   ESLAREMEKRIIRTNPLGKDR 66
           E   REMEKR++RTN LGKDR
Sbjct: 587 EYYEREMEKRVLRTNSLGKDR 607



 Score = 21.2 bits (43), Expect(3) = 3e-06
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +2

Query: 65  DYNRYWF 85
           DYNRYW+
Sbjct: 608 DYNRYWW 614


>ref|XP_004147319.1| PREDICTED: DDT domain-containing protein DDB_G0282237-like [Cucumis
           sativus]
          Length = 615

 Score = 40.4 bits (93), Expect(2) = 5e-06
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +3

Query: 48  PFGERQITTGIGLFRRNSKIYVKSSDSTQWGYYSSKYEV 164
           P G+ +       FRR+ +I+V+SSDS +WGYYSS  E+
Sbjct: 499 PLGKDRHHNRYWWFRRDGRIFVESSDSKEWGYYSSMEEL 537



 Score = 34.7 bits (78), Expect(2) = 5e-06
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +1

Query: 1   KESLAREMEKRIIRTNPLGKDR 66
           +E   RE+EKR I+TNPLGKDR
Sbjct: 483 REYYERELEKRSIKTNPLGKDR 504


>ref|XP_004173906.1| PREDICTED: DDT domain-containing protein DDB_G0282237-like, partial
           [Cucumis sativus]
          Length = 329

 Score = 40.4 bits (93), Expect(2) = 5e-06
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +3

Query: 48  PFGERQITTGIGLFRRNSKIYVKSSDSTQWGYYSSKYEV 164
           P G+ +       FRR+ +I+V+SSDS +WGYYSS  E+
Sbjct: 213 PLGKDRHHNRYWWFRRDGRIFVESSDSKEWGYYSSMEEL 251



 Score = 34.7 bits (78), Expect(2) = 5e-06
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +1

Query: 1   KESLAREMEKRIIRTNPLGKDR 66
           +E   RE+EKR I+TNPLGKDR
Sbjct: 197 REYYERELEKRSIKTNPLGKDR 218


>ref|XP_002873374.1| DDT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319211|gb|EFH49633.1| DDT domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 722

 Score = 40.0 bits (92), Expect(2) = 6e-06
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +3

Query: 48  PFGERQITTGIGLFRRNSKIYVKSSDSTQWGYYSSKYEVLSL 173
           P G+ +       FR N +I+V+ SDS +WGYY+SK E+ +L
Sbjct: 606 PLGKDRDYNRYWWFRSNGRIFVEDSDSKEWGYYTSKEELDAL 647



 Score = 34.7 bits (78), Expect(2) = 6e-06
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +1

Query: 16  REMEKRIIRTNPLGKDR 66
           REMEK +IRTNPLGKDR
Sbjct: 595 REMEKIVIRTNPLGKDR 611


>emb|CBI21659.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score = 40.8 bits (94), Expect(2) = 8e-06
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +3

Query: 48  PFGERQITTGIGLFRRNSKIYVKSSDSTQWGYYSSKYEV 164
           P G+ +       FRR+ +I+V+S DS QWGYYS+K E+
Sbjct: 581 PLGKDKDYNRYWFFRRDGRIFVESWDSKQWGYYSTKEEL 619



 Score = 33.5 bits (75), Expect(2) = 8e-06
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +1

Query: 1   KESLAREMEKRIIRTNPLGKDR 66
           +E L RE++KR IRT PLGKD+
Sbjct: 565 REYLQREIDKRFIRTEPLGKDK 586


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