BLASTX nr result

ID: Cnidium21_contig00020611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020611
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315165.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47
gb|ABK94988.1| unknown [Populus trichocarpa] gi|118487741|gb|ABK...   192   3e-47
ref|XP_002312149.1| predicted protein [Populus trichocarpa] gi|2...   192   5e-47
ref|XP_003603496.1| 60S acidic ribosomal protein p0 [Medicago tr...   192   5e-47
gb|AFK39880.1| unknown [Medicago truncatula]                          190   2e-46

>ref|XP_002315165.1| predicted protein [Populus trichocarpa] gi|222864205|gb|EEF01336.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  192 bits (489), Expect = 3e-47
 Identities = 100/138 (72%), Positives = 112/138 (81%)
 Frame = -1

Query: 625 QVLNIPTKINKGTVEITTNVDLIKKGDKVGSSEAALLAKLGLRPFSYGLVVKSAYDNGSV 446
           QVLNIPTKINKGTVEI T V+LIKKGDKVGSSEAALLAKLG+RPFSYGLVV SAYDNGSV
Sbjct: 142 QVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSAYDNGSV 201

Query: 445 LSPEVLELTEDDVXXXXXXXXXXXXXXXXXLSYPSIAAAPSMFINAYKNVLAFSVATDYT 266
            SPEVL+LTEDD+                  SYP++AAAP MFINAYKNVLA +VAT+Y+
Sbjct: 202 FSPEVLDLTEDDLIDKFAAGVSMIASLSLATSYPTLAAAPHMFINAYKNVLAVAVATEYS 261

Query: 265 YKQAREVKEFLKDPSKFA 212
           + QA +VKEFL+DPSKFA
Sbjct: 262 FPQAEKVKEFLEDPSKFA 279


>gb|ABK94988.1| unknown [Populus trichocarpa] gi|118487741|gb|ABK95694.1| unknown
           [Populus trichocarpa]
          Length = 320

 Score =  192 bits (489), Expect = 3e-47
 Identities = 100/138 (72%), Positives = 112/138 (81%)
 Frame = -1

Query: 625 QVLNIPTKINKGTVEITTNVDLIKKGDKVGSSEAALLAKLGLRPFSYGLVVKSAYDNGSV 446
           QVLNIPTKINKGTVEI T V+LIKKGDKVGSSEAALLAKLG+RPFSYGLVV SAYDNGSV
Sbjct: 142 QVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSAYDNGSV 201

Query: 445 LSPEVLELTEDDVXXXXXXXXXXXXXXXXXLSYPSIAAAPSMFINAYKNVLAFSVATDYT 266
            SPEVL+LTEDD+                  SYP++AAAP MFINAYKNVLA +VAT+Y+
Sbjct: 202 FSPEVLDLTEDDLIDKFAAGVSMIASLSLATSYPTLAAAPHMFINAYKNVLAVAVATEYS 261

Query: 265 YKQAREVKEFLKDPSKFA 212
           + QA +VKEFL+DPSKFA
Sbjct: 262 FPQAEKVKEFLEDPSKFA 279


>ref|XP_002312149.1| predicted protein [Populus trichocarpa] gi|222851969|gb|EEE89516.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  192 bits (487), Expect = 5e-47
 Identities = 99/138 (71%), Positives = 111/138 (80%)
 Frame = -1

Query: 625 QVLNIPTKINKGTVEITTNVDLIKKGDKVGSSEAALLAKLGLRPFSYGLVVKSAYDNGSV 446
           QVLNIPTKINKGTVEI T V+LIKKGDKVGSSEAALLAKLG+RPFSYGLVV S YDNGSV
Sbjct: 142 QVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSV 201

Query: 445 LSPEVLELTEDDVXXXXXXXXXXXXXXXXXLSYPSIAAAPSMFINAYKNVLAFSVATDYT 266
            SP VL+LTEDD+                 +SYP++AAAP MFINAYKN+L+ +VAT+Y+
Sbjct: 202 FSPTVLDLTEDDLVEKFATGITMITSLSLAISYPTLAAAPHMFINAYKNILSVAVATEYS 261

Query: 265 YKQAREVKEFLKDPSKFA 212
           Y QA EVKEFLKDPSKFA
Sbjct: 262 YPQAEEVKEFLKDPSKFA 279


>ref|XP_003603496.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
           gi|355492544|gb|AES73747.1| 60S acidic ribosomal protein
           p0 [Medicago truncatula]
          Length = 323

 Score =  192 bits (487), Expect = 5e-47
 Identities = 98/138 (71%), Positives = 113/138 (81%)
 Frame = -1

Query: 625 QVLNIPTKINKGTVEITTNVDLIKKGDKVGSSEAALLAKLGLRPFSYGLVVKSAYDNGSV 446
           QVLNIPTKINKGTVEI T V+LIKKGDKVGSSEAALLAKLG+RPFSYGLVV S YDNGSV
Sbjct: 142 QVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSV 201

Query: 445 LSPEVLELTEDDVXXXXXXXXXXXXXXXXXLSYPSIAAAPSMFINAYKNVLAFSVATDYT 266
            SPEVL+LTEDD+                 +SYP++AAAP MF+NAYKNVLAF+VAT+Y+
Sbjct: 202 FSPEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAFAVATEYS 261

Query: 265 YKQAREVKEFLKDPSKFA 212
           + +A +VKE+LKDPSKFA
Sbjct: 262 FPEADKVKEYLKDPSKFA 279


>gb|AFK39880.1| unknown [Medicago truncatula]
          Length = 323

 Score =  190 bits (483), Expect = 2e-46
 Identities = 97/138 (70%), Positives = 112/138 (81%)
 Frame = -1

Query: 625 QVLNIPTKINKGTVEITTNVDLIKKGDKVGSSEAALLAKLGLRPFSYGLVVKSAYDNGSV 446
           QVLNIPTKINKGT EI T V+LIKKGDKVGSSEAALLAKLG+RPFSYGLVV S YDNGSV
Sbjct: 142 QVLNIPTKINKGTAEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSV 201

Query: 445 LSPEVLELTEDDVXXXXXXXXXXXXXXXXXLSYPSIAAAPSMFINAYKNVLAFSVATDYT 266
            SPEVL+LTEDD+                 +SYP++AAAP MF+NAYKNVLAF+VAT+Y+
Sbjct: 202 FSPEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAFAVATEYS 261

Query: 265 YKQAREVKEFLKDPSKFA 212
           + +A +VKE+LKDPSKFA
Sbjct: 262 FPEADKVKEYLKDPSKFA 279


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