BLASTX nr result

ID: Cnidium21_contig00020602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020602
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2...   189   3e-46
ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycin...   186   2e-45
gb|AAQ62584.1| putative Rab geranylgeranyl transferase type II b...   186   2e-45
ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2...   185   4e-45
ref|XP_002319501.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45

>ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
           vinifera] gi|147821440|emb|CAN74579.1| hypothetical
           protein VITISV_024797 [Vitis vinifera]
           gi|296081232|emb|CBI17976.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  189 bits (479), Expect = 3e-46
 Identities = 84/107 (78%), Positives = 104/107 (97%)
 Frame = +1

Query: 139 MGELVADEHVKYILAVEKRKDDFESVVTEHLRINGAYWGLTTVDILGKLESVDQEEIVAW 318
           +GEL A++HV+YIL VEKRKDDFESVVTEHLR+NGAYWGLTT+D+LGKLE VDQ+E+V+W
Sbjct: 5   IGELEAEKHVQYILLVEKRKDDFESVVTEHLRMNGAYWGLTTLDLLGKLEIVDQDEVVSW 64

Query: 319 VMKCQHESGGFGGNIGHDPHLLYTLSAVQILALFDRINVLDIDKVSS 459
           VM+CQHESGGFGGNIGHDPH+++TLSAVQ+LALFD++NVLDIDK+++
Sbjct: 65  VMECQHESGGFGGNIGHDPHIVHTLSAVQVLALFDKLNVLDIDKITN 111


>ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycine max]
           gi|255635594|gb|ACU18147.1| unknown [Glycine max]
          Length = 317

 Score =  186 bits (471), Expect = 2e-45
 Identities = 81/107 (75%), Positives = 101/107 (94%)
 Frame = +1

Query: 139 MGELVADEHVKYILAVEKRKDDFESVVTEHLRINGAYWGLTTVDILGKLESVDQEEIVAW 318
           MGEL  ++HV+YIL+VEKRKD+FESVV EHLR+NGAYWGLTT+D+LGKL SVD +E+V+W
Sbjct: 1   MGELATEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSW 60

Query: 319 VMKCQHESGGFGGNIGHDPHLLYTLSAVQILALFDRINVLDIDKVSS 459
           +M CQHESGGFGGN+GHDPH+LYTLSAVQ+LALFD++NV+D+DKV+S
Sbjct: 61  LMSCQHESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVIDVDKVTS 107


>gb|AAQ62584.1| putative Rab geranylgeranyl transferase type II beta subunit
           [Glycine max]
          Length = 317

 Score =  186 bits (471), Expect = 2e-45
 Identities = 81/107 (75%), Positives = 101/107 (94%)
 Frame = +1

Query: 139 MGELVADEHVKYILAVEKRKDDFESVVTEHLRINGAYWGLTTVDILGKLESVDQEEIVAW 318
           MGEL  ++HV+YIL+VEKRKD+FESVV EHLR+NGAYWGLTT+D+LGKL SVD +E+V+W
Sbjct: 1   MGELATEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSW 60

Query: 319 VMKCQHESGGFGGNIGHDPHLLYTLSAVQILALFDRINVLDIDKVSS 459
           +M CQHESGGFGGN+GHDPH+LYTLSAVQ+LALFD++NV+D+DKV+S
Sbjct: 61  LMSCQHESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVIDVDKVTS 107


>ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
           vinifera] gi|147860391|emb|CAN82570.1| hypothetical
           protein VITISV_016117 [Vitis vinifera]
           gi|296090220|emb|CBI40039.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  185 bits (469), Expect = 4e-45
 Identities = 81/107 (75%), Positives = 103/107 (96%)
 Frame = +1

Query: 139 MGELVADEHVKYILAVEKRKDDFESVVTEHLRINGAYWGLTTVDILGKLESVDQEEIVAW 318
           +G+L  ++HV+YIL+VEKRKD+FESVV EHLR+NGAYWGLTT+D+LGKL+ VD++EI++W
Sbjct: 5   IGDLEVEKHVQYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLDMVDEDEIISW 64

Query: 319 VMKCQHESGGFGGNIGHDPHLLYTLSAVQILALFDRINVLDIDKVSS 459
           VM+CQHESGGFGGN+GHDPH+LYTLSAVQ+LALFD++NVLDIDKVS+
Sbjct: 65  VMECQHESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVLDIDKVSN 111


>ref|XP_002319501.1| predicted protein [Populus trichocarpa] gi|222857877|gb|EEE95424.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  184 bits (466), Expect = 8e-45
 Identities = 81/107 (75%), Positives = 98/107 (91%)
 Frame = +1

Query: 139 MGELVADEHVKYILAVEKRKDDFESVVTEHLRINGAYWGLTTVDILGKLESVDQEEIVAW 318
           MGELV D+HVKYIL+VEKRKD FESVV EHLR+NGAYWGL T+D+LGKL+++D  E++ W
Sbjct: 1   MGELVVDKHVKYILSVEKRKDSFESVVLEHLRMNGAYWGLATLDLLGKLDALDSNEVIEW 60

Query: 319 VMKCQHESGGFGGNIGHDPHLLYTLSAVQILALFDRINVLDIDKVSS 459
           +MKCQHESGGF GNIGHDPH+LYTLSAVQ+LALFD++NVLD DKV++
Sbjct: 61  IMKCQHESGGFAGNIGHDPHMLYTLSAVQVLALFDKLNVLDADKVAN 107


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