BLASTX nr result

ID: Cnidium21_contig00020592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020592
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270858.1| PREDICTED: iron-sulfur cluster co-chaperone ...   116   2e-24
ref|XP_004136528.1| PREDICTED: iron-sulfur cluster co-chaperone ...   115   4e-24
ref|XP_003519104.1| PREDICTED: iron-sulfur cluster co-chaperone ...   114   1e-23
ref|XP_003537126.1| PREDICTED: iron-sulfur cluster co-chaperone ...   112   3e-23
dbj|BAB08963.1| unnamed protein product [Arabidopsis thaliana]        112   4e-23

>ref|XP_002270858.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial isoform 1 [Vitis vinifera]
           gi|359481056|ref|XP_003632561.1| PREDICTED: iron-sulfur
           cluster co-chaperone protein HscB, mitochondrial isoform
           2 [Vitis vinifera] gi|296089348|emb|CBI39120.3| unnamed
           protein product [Vitis vinifera]
          Length = 267

 Score =  116 bits (290), Expect = 2e-24
 Identities = 61/118 (51%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
 Frame = -1

Query: 347 RVYQISKPQWLANARFTGRNICSDS---HVIASCWNCNVVAASMNPFLVCHSCRAVQPVD 177
           RV+  S   +L + +F+ R +CS      V   CWNC   AA   PFL C SCR+VQPVD
Sbjct: 47  RVFWSSSYDFLGSLKFS-RKLCSAQSAEQVHVRCWNCKA-AAQTTPFLACDSCRSVQPVD 104

Query: 176 HSIDYFDIFSLKKKFEIDDDNLERKYKDWQKKLHPDLVHXXXXXXXXXXXXXXARVID 3
            S+DYF IF L+KK+E++D+NLE KYKDWQKKLHPDLVH              ARVID
Sbjct: 105 PSVDYFQIFGLEKKYELEDNNLEGKYKDWQKKLHPDLVHSKSEEEKEYAAEQSARVID 162


>ref|XP_004136528.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial-like [Cucumis sativus]
           gi|449501132|ref|XP_004161286.1| PREDICTED: iron-sulfur
           cluster co-chaperone protein HscB, mitochondrial-like
           [Cucumis sativus]
          Length = 275

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/126 (48%), Positives = 74/126 (58%), Gaps = 10/126 (7%)
 Frame = -1

Query: 350 PRVYQISKP------QWLANARFTGRNICSDSHVIA----SCWNCNVVAASMNPFLVCHS 201
           P + + S+P      ++L N  F+ R  CS S   +     CWNC  VA S   FLVC S
Sbjct: 45  PSIAECSRPSPPTACEFLDNLSFSSRVFCSRSAEASVLKPGCWNCGAVAPSSAVFLVCDS 104

Query: 200 CRAVQPVDHSIDYFDIFSLKKKFEIDDDNLERKYKDWQKKLHPDLVHXXXXXXXXXXXXX 21
           CR++QPVD  +DYF IF L+K++EI D NLE KYKDWQKKLHPDLVH             
Sbjct: 105 CRSIQPVDQLVDYFQIFGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDREREYAAEQ 164

Query: 20  XARVID 3
            ARVID
Sbjct: 165 SARVID 170


>ref|XP_003519104.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial-like [Glycine max]
          Length = 266

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = -1

Query: 305 RFTGRNICSDS--HVIASCWNCNVVAASMNPFLVCHSCRAVQPVDHSIDYFDIFSLKKKF 132
           RF G+++CS S   +   CWNC+ V  S  PFLVC  C+ +QPVD SIDYFDIF +++K+
Sbjct: 60  RFFGKSLCSKSAEEIQRGCWNCHTVPHS-EPFLVCELCQCIQPVDSSIDYFDIFGVERKY 118

Query: 131 EIDDDNLERKYKDWQKKLHPDLVHXXXXXXXXXXXXXXARVID 3
           +I+ +NLE KYKDWQKKLHPDLVH              ARVID
Sbjct: 119 DIEGENLEGKYKDWQKKLHPDLVHSKSQKERDFAAEQSARVID 161


>ref|XP_003537126.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial-like [Glycine max]
          Length = 265

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
 Frame = -1

Query: 302 FTGRNICSDS--HVIASCWNCNVVAASMNPFLVCHSCRAVQPVDHSIDYFDIFSLKKKFE 129
           F  +++CS S   +   CWNC+ V  S  PFLVC SCR +QPVD S+DYFDIF +++K++
Sbjct: 60  FFRKSLCSKSAEEIQRGCWNCHTVPHS-EPFLVCESCRCIQPVDSSVDYFDIFGVERKYD 118

Query: 128 IDDDNLERKYKDWQKKLHPDLVHXXXXXXXXXXXXXXARVID 3
           I+ +NLE KYKDWQKKLHPDLVH              ARVID
Sbjct: 119 IEGENLEGKYKDWQKKLHPDLVHSKSQKERDFAAEQSARVID 160


>dbj|BAB08963.1| unnamed protein product [Arabidopsis thaliana]
          Length = 246

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/82 (64%), Positives = 62/82 (75%)
 Frame = -1

Query: 305 RFTGRNICSDSHVIASCWNCNVVAASMNPFLVCHSCRAVQPVDHSIDYFDIFSLKKKFEI 126
           RF+GR  CS+S   A CWNC   AA    FL C+SCR++QPVD S+DYF IF L+KK+EI
Sbjct: 47  RFSGRVFCSESG--AGCWNCGEKAA----FLFCNSCRSIQPVDDSVDYFQIFGLEKKYEI 100

Query: 125 DDDNLERKYKDWQKKLHPDLVH 60
           D  +LE KYKDWQKKLHPDLVH
Sbjct: 101 DPGSLEGKYKDWQKKLHPDLVH 122


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