BLASTX nr result

ID: Cnidium21_contig00020563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020563
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193236.1| 60S ribosomal protein L27-3 [Arabidopsis thalia...    55   8e-06
ref|XP_002870267.1| 60S ribosomal protein L27 [Arabidopsis lyrat...    55   8e-06
gb|AAM63601.1| ribosomal protein L27, putative [Arabidopsis thal...    55   8e-06
ref|NP_188862.1| 60S ribosomal protein L27-2 [Arabidopsis thalia...    55   8e-06

>ref|NP_193236.1| 60S ribosomal protein L27-3 [Arabidopsis thaliana]
           gi|3123264|sp|P51419.2|RL273_ARATH RecName: Full=60S
           ribosomal protein L27-3 gi|2244857|emb|CAB10279.1|
           ribosomal protein [Arabidopsis thaliana]
           gi|7268246|emb|CAB78542.1| ribosomal protein
           [Arabidopsis thaliana] gi|17381062|gb|AAL36343.1|
           putative ribosomal protein [Arabidopsis thaliana]
           gi|20466061|gb|AAM20365.1| putative ribosomal protein
           [Arabidopsis thaliana] gi|21553620|gb|AAM62713.1|
           ribosomal protein [Arabidopsis thaliana]
           gi|110736737|dbj|BAF00331.1| ribosomal protein
           [Arabidopsis thaliana] gi|332658135|gb|AEE83535.1| 60S
           ribosomal protein L27-3 [Arabidopsis thaliana]
          Length = 135

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -1

Query: 293 KEAKARLEERFKTGKNRWFFTKLRF 219
           KEAKA+LEERFKTGKNRWFFTKLRF
Sbjct: 111 KEAKAKLEERFKTGKNRWFFTKLRF 135


>ref|XP_002870267.1| 60S ribosomal protein L27 [Arabidopsis lyrata subsp. lyrata]
           gi|297316103|gb|EFH46526.1| 60S ribosomal protein L27
           [Arabidopsis lyrata subsp. lyrata]
          Length = 135

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -1

Query: 293 KEAKARLEERFKTGKNRWFFTKLRF 219
           KEAKA+LEERFKTGKNRWFFTKLRF
Sbjct: 111 KEAKAKLEERFKTGKNRWFFTKLRF 135


>gb|AAM63601.1| ribosomal protein L27, putative [Arabidopsis thaliana]
          Length = 135

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -1

Query: 293 KEAKARLEERFKTGKNRWFFTKLRF 219
           KEAKA+LEERFKTGKNRWFFTKLRF
Sbjct: 111 KEAKAKLEERFKTGKNRWFFTKLRF 135


>ref|NP_188862.1| 60S ribosomal protein L27-2 [Arabidopsis thaliana]
           gi|297835212|ref|XP_002885488.1| 60S ribosomal protein
           L27 [Arabidopsis lyrata subsp. lyrata]
           gi|109893407|sp|Q8LCL3.2|RL272_ARATH RecName: Full=60S
           ribosomal protein L27-2 gi|11994741|dbj|BAB03070.1| 60S
           ribosomal protein L27 [Arabidopsis thaliana]
           gi|17065082|gb|AAL32695.1| 60S ribosomal protein L27
           [Arabidopsis thaliana] gi|17380772|gb|AAL36216.1|
           putative ribosomal protein L27 [Arabidopsis thaliana]
           gi|20259601|gb|AAM14157.1| putative ribosomal protein
           L27 [Arabidopsis thaliana] gi|20260082|gb|AAM13388.1|
           60S ribosomal protein L27 [Arabidopsis thaliana]
           gi|22530966|gb|AAM96987.1| putative ribosomal protein
           L27 [Arabidopsis thaliana] gi|23198420|gb|AAN15737.1|
           putative ribosomal protein L27 [Arabidopsis thaliana]
           gi|297331328|gb|EFH61747.1| 60S ribosomal protein L27
           [Arabidopsis lyrata subsp. lyrata]
           gi|332643086|gb|AEE76607.1| 60S ribosomal protein L27-2
           [Arabidopsis thaliana]
          Length = 135

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = -1

Query: 293 KEAKARLEERFKTGKNRWFFTKLRF 219
           KEAKA+LEERFKTGKNRWFFTKLRF
Sbjct: 111 KEAKAKLEERFKTGKNRWFFTKLRF 135


Top