BLASTX nr result

ID: Cnidium21_contig00020558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020558
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311585.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002315808.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
gb|AFK41079.1| unknown [Lotus japonicus]                              119   3e-25
ref|XP_002268639.1| PREDICTED: uncharacterized protein LOC100250...   117   1e-24
ref|XP_002531407.1| conserved hypothetical protein [Ricinus comm...   117   1e-24

>ref|XP_002311585.1| predicted protein [Populus trichocarpa] gi|222851405|gb|EEE88952.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/77 (77%), Positives = 67/77 (87%)
 Frame = +2

Query: 119 MGNCQAVDAAALVVQHPDGRIERMYWSVCVSEVMKMNPGHYVSLIIPLPVDGQENSDEKA 298
           MGNCQA+DAAALV+QHP G+IER+YW V VSEVM+MNPGHYVSLIIPLPV G + + E  
Sbjct: 1   MGNCQAIDAAALVIQHPSGKIERLYWPVSVSEVMRMNPGHYVSLIIPLPVSGDQENQEHI 60

Query: 299 KTVQFTRVKLLRPSDRL 349
           KTVQFTRVKLLRPSD L
Sbjct: 61  KTVQFTRVKLLRPSDSL 77


>ref|XP_002315808.1| predicted protein [Populus trichocarpa] gi|222864848|gb|EEF01979.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/77 (72%), Positives = 65/77 (84%)
 Frame = +2

Query: 119 MGNCQAVDAAALVVQHPDGRIERMYWSVCVSEVMKMNPGHYVSLIIPLPVDGQENSDEKA 298
           MGNCQ +DAAALV+QHP G+IER+Y  V VSEVM+MNPGHYVSLIIPLPV G + + +  
Sbjct: 1   MGNCQTIDAAALVIQHPSGKIERLYCPVSVSEVMRMNPGHYVSLIIPLPVSGDQENQDHV 60

Query: 299 KTVQFTRVKLLRPSDRL 349
           KTVQFTRVKLLRPS+ L
Sbjct: 61  KTVQFTRVKLLRPSNTL 77


>gb|AFK41079.1| unknown [Lotus japonicus]
          Length = 175

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/77 (71%), Positives = 65/77 (84%)
 Frame = +2

Query: 119 MGNCQAVDAAALVVQHPDGRIERMYWSVCVSEVMKMNPGHYVSLIIPLPVDGQENSDEKA 298
           MGNCQAVDAA LV+QHP G+IERMYW +  SEVMK NPGHYVSLIIPLPV  QE  +++ 
Sbjct: 1   MGNCQAVDAAVLVIQHPGGKIERMYWPITASEVMKTNPGHYVSLIIPLPVTEQEQRNQEQ 60

Query: 299 KTVQFTRVKLLRPSDRL 349
           K+V+FTRVKLLRP++ L
Sbjct: 61  KSVRFTRVKLLRPNETL 77


>ref|XP_002268639.1| PREDICTED: uncharacterized protein LOC100250100 [Vitis vinifera]
           gi|296086500|emb|CBI32089.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/78 (71%), Positives = 66/78 (84%)
 Frame = +2

Query: 119 MGNCQAVDAAALVVQHPDGRIERMYWSVCVSEVMKMNPGHYVSLIIPLPVDGQENSDEKA 298
           MGNCQA+DAAALV+QHP GRIER+YW+V   EVM+MNPGHYVSLIIPLP+  Q++     
Sbjct: 1   MGNCQAIDAAALVIQHPCGRIERLYWTVSAGEVMRMNPGHYVSLIIPLPIP-QDHDTPDN 59

Query: 299 KTVQFTRVKLLRPSDRLV 352
           KTV+FTRVKLLRP+D LV
Sbjct: 60  KTVRFTRVKLLRPTDTLV 77


>ref|XP_002531407.1| conserved hypothetical protein [Ricinus communis]
           gi|223529000|gb|EEF30991.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 11/88 (12%)
 Frame = +2

Query: 119 MGNCQAVDAAALVVQHPDGRIERMYWSVCVSEVMKMNPGHYVSLIIPLPVDGQENSDEK- 295
           MGNCQA+DAAALV+QHP G+IER+YW +  SEVM+MNPGHYVSLIIPLPV  ++N++   
Sbjct: 1   MGNCQAIDAAALVIQHPSGKIERLYWPILASEVMRMNPGHYVSLIIPLPVSAEDNNNNNQ 60

Query: 296 ----------AKTVQFTRVKLLRPSDRL 349
                     A TVQFTRVKLLRP+D L
Sbjct: 61  HNNNTAAAPAATTVQFTRVKLLRPTDTL 88


Top