BLASTX nr result

ID: Cnidium21_contig00020554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020554
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus...   388   e-105
ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105
emb|CBI19327.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion pro...   379   e-103
ref|XP_003615399.1| Multidrug and toxin extrusion protein [Medic...   365   7e-99

>ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus communis]
            gi|223550704|gb|EEF52190.1| multidrug resistance pump,
            putative [Ricinus communis]
          Length = 528

 Score =  388 bits (996), Expect = e-105
 Identities = 204/286 (71%), Positives = 219/286 (76%), Gaps = 5/286 (1%)
 Frame = -1

Query: 1024 GWSSLLGLAIPTCVSVCLEWWWYELMIMLCGLLVNPRATIASMGILIQTTSLVYVFPSAL 845
            GWSSLL LA+PTCVSVCLEWWWYE MIMLCGLLVNP+ATIASMGILIQTTSLVYVFPS+L
Sbjct: 245  GWSSLLALAVPTCVSVCLEWWWYEFMIMLCGLLVNPKATIASMGILIQTTSLVYVFPSSL 304

Query: 844  SLGVSTRVGNELGANRPAKARISMIISLICAVALGLAAMLFTTLMRHYWGRFFTTDTQIL 665
            SLGVSTRVGNELGANRPAKARISMI+SL CAV LGL AMLFTTLMRH WGRFFT D +IL
Sbjct: 305  SLGVSTRVGNELGANRPAKARISMIVSLSCAVGLGLLAMLFTTLMRHQWGRFFTNDVEIL 364

Query: 664  DLTAMALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAFLMGFVFN 485
            +LTA+ALPI GLCELGNCPQT GCGVLRGSARPTIGANINLGSFYLVGMPV  LMGFV  
Sbjct: 365  ELTAVALPIVGLCELGNCPQTAGCGVLRGSARPTIGANINLGSFYLVGMPVGMLMGFVAK 424

Query: 484  MXXXXXXXXXXXXXASCAVLMLCVLCKTDWMVQVERAKEXXXXXXXXXXXXXXLPVVTLN 305
            M             ASCA+LML VLC+TDW VQ ERA++              +   T  
Sbjct: 425  MGFAGLWLGLLAAQASCAILMLYVLCRTDWSVQAERARKLTQTSATNSASILPVSSATKP 484

Query: 304  SGATTN-----KKNGQNLDEILCSFDDEFVKSSAALEADPLISATT 182
             G T N     K    NL+EIL S DDE VKS+ +LE DPLIS TT
Sbjct: 485  EGITNNTVMKIKNKKANLEEIL-SIDDELVKST-SLETDPLISNTT 528


>ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|222842827|gb|EEE80374.1|
            predicted protein [Populus trichocarpa]
          Length = 528

 Score =  387 bits (994), Expect = e-105
 Identities = 202/288 (70%), Positives = 226/288 (78%), Gaps = 6/288 (2%)
 Frame = -1

Query: 1024 GWSSLLGLAIPTCVSVCLEWWWYELMIMLCGLLVNPRATIASMGILIQTTSLVYVFPSAL 845
            GWSSLL LA+PTCVSVCLEWWWYE MIMLCGLL+NP+AT+ASMGILIQTTSLVYVFPS+L
Sbjct: 246  GWSSLLTLAVPTCVSVCLEWWWYEFMIMLCGLLINPKATVASMGILIQTTSLVYVFPSSL 305

Query: 844  SLGVSTRVGNELGANRPAKARISMIISLICAVALGLAAMLFTTLMRHYWGRFFTTDTQIL 665
            SLGVSTRVGNELGANRPAKARISMI+SL+CAVALGL AMLFTTLMRH WGRFFT D +IL
Sbjct: 306  SLGVSTRVGNELGANRPAKARISMIVSLVCAVALGLMAMLFTTLMRHQWGRFFTNDAEIL 365

Query: 664  DLTAMALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAFLMGFVFN 485
            +LT++ALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVA  +GFV  
Sbjct: 366  ELTSIALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAMFLGFVAK 425

Query: 484  MXXXXXXXXXXXXXASCAVLMLCVLCKTDWMVQVERAKEXXXXXXXXXXXXXXLPVVTLN 305
            M             ASCA+LML  LC TDWMVQVERA+                P++ ++
Sbjct: 426  MGFAGLWLGLLAAQASCALLMLYALCTTDWMVQVERAR-----LLTQTSGACTTPILPIS 480

Query: 304  SG----ATTNKKNGQ--NLDEILCSFDDEFVKSSAALEADPLISATTT 179
            S      TT + N    NL++ILC  +D+ VK SA+LE DPLIS T T
Sbjct: 481  SSKLEVMTTKEANSNKANLEDILC-INDDLVK-SASLETDPLISTTQT 526


>emb|CBI19327.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  379 bits (973), Expect = e-103
 Identities = 198/280 (70%), Positives = 220/280 (78%), Gaps = 3/280 (1%)
 Frame = -1

Query: 1024 GWSSLLGLAIPTCVSVCLEWWWYELMIMLCGLLVNPRATIASMGILIQTTSLVYVFPSAL 845
            GWSSLL LA+PTC+SVCLEWWWYE MIMLCGLL NP+ATIASMGILIQTTSLVYVFPSAL
Sbjct: 246  GWSSLLALAVPTCISVCLEWWWYEFMIMLCGLLANPKATIASMGILIQTTSLVYVFPSAL 305

Query: 844  SLGVSTRVGNELGANRPAKARISMIISLICAVALGLAAMLFTTLMRHYWGRFFTTDTQIL 665
            SLGVSTRVGNELGANRPAKARI MI+SL CAVALGLAAMLFTTLMRH WGRFFT D ++L
Sbjct: 306  SLGVSTRVGNELGANRPAKARICMIVSLFCAVALGLAAMLFTTLMRHQWGRFFTNDAEVL 365

Query: 664  DLTAMALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAFLMGFVFN 485
            +LTA+ALPIAGLCELGNCPQTTGCGVLRGSARPT GANINLGSFYLVGMPVA +MGFV  
Sbjct: 366  ELTAVALPIAGLCELGNCPQTTGCGVLRGSARPTEGANINLGSFYLVGMPVAIIMGFVAK 425

Query: 484  MXXXXXXXXXXXXXASCAVLMLCVLCKTDWMVQVERAKEXXXXXXXXXXXXXXLPVVTLN 305
            M              SCA LML VLC+TDW+VQV+RA++              LPV + +
Sbjct: 426  MGFAGLWLGLLAAQTSCAFLMLYVLCRTDWVVQVKRARD--LTQTSSTLAIPSLPVSSAS 483

Query: 304  SGAT---TNKKNGQNLDEILCSFDDEFVKSSAALEADPLI 194
            + A+   T      +L+E+LC  DD FVK SA+ E DPLI
Sbjct: 484  ASASDSITRDPKRTDLEEVLCITDD-FVK-SASPETDPLI 521


>ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion protein 1 [Vitis vinifera]
            gi|147802486|emb|CAN77415.1| hypothetical protein
            VITISV_000475 [Vitis vinifera]
          Length = 527

 Score =  379 bits (973), Expect = e-103
 Identities = 198/280 (70%), Positives = 220/280 (78%), Gaps = 3/280 (1%)
 Frame = -1

Query: 1024 GWSSLLGLAIPTCVSVCLEWWWYELMIMLCGLLVNPRATIASMGILIQTTSLVYVFPSAL 845
            GWSSLL LA+PTC+SVCLEWWWYE MIMLCGLL NP+ATIASMGILIQTTSLVYVFPSAL
Sbjct: 246  GWSSLLALAVPTCISVCLEWWWYEFMIMLCGLLANPKATIASMGILIQTTSLVYVFPSAL 305

Query: 844  SLGVSTRVGNELGANRPAKARISMIISLICAVALGLAAMLFTTLMRHYWGRFFTTDTQIL 665
            SLGVSTRVGNELGANRPAKARI MI+SL CAVALGLAAMLFTTLMRH WGRFFT D ++L
Sbjct: 306  SLGVSTRVGNELGANRPAKARICMIVSLFCAVALGLAAMLFTTLMRHQWGRFFTNDAEVL 365

Query: 664  DLTAMALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAFLMGFVFN 485
            +LTA+ALPIAGLCELGNCPQTTGCGVLRGSARPT GANINLGSFYLVGMPVA +MGFV  
Sbjct: 366  ELTAVALPIAGLCELGNCPQTTGCGVLRGSARPTEGANINLGSFYLVGMPVAIIMGFVAK 425

Query: 484  MXXXXXXXXXXXXXASCAVLMLCVLCKTDWMVQVERAKEXXXXXXXXXXXXXXLPVVTLN 305
            M              SCA LML VLC+TDW+VQV+RA++              LPV + +
Sbjct: 426  MGFAGLWLGLLAAQTSCAFLMLYVLCRTDWVVQVKRARD--LTQTSSTLAIPSLPVSSAS 483

Query: 304  SGAT---TNKKNGQNLDEILCSFDDEFVKSSAALEADPLI 194
            + A+   T      +L+E+LC  DD FVK SA+ E DPLI
Sbjct: 484  ASASDSITRDPKRTDLEEVLCITDD-FVK-SASPETDPLI 521


>ref|XP_003615399.1| Multidrug and toxin extrusion protein [Medicago truncatula]
            gi|355516734|gb|AES98357.1| Multidrug and toxin extrusion
            protein [Medicago truncatula]
          Length = 560

 Score =  365 bits (938), Expect = 7e-99
 Identities = 189/286 (66%), Positives = 213/286 (74%), Gaps = 1/286 (0%)
 Frame = -1

Query: 1024 GWSSLLGLAIPTCVSVCLEWWWYELMIMLCGLLVNPRATIASMGILIQTTSLVYVFPSAL 845
            GWSSLL LAIPTCVSVCLEWWWYE MIM+CGLLVNP+ATIASMGILIQTTSLVYVFPS+L
Sbjct: 277  GWSSLLSLAIPTCVSVCLEWWWYEFMIMMCGLLVNPKATIASMGILIQTTSLVYVFPSSL 336

Query: 844  SLGVSTRVGNELGANRPAKARISMIISLICAVALGLAAMLFTTLMRHYWGRFFTTDTQIL 665
            SLGVSTR+GNELGANRP KARISMI+SL  A+ LGL AMLFTTLMR+ WG+FFT D +IL
Sbjct: 337  SLGVSTRIGNELGANRPQKARISMIVSLFLAMVLGLGAMLFTTLMRNQWGKFFTNDREIL 396

Query: 664  DLTAMALPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAFLMGFVFN 485
            +LT++ LPI GLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVA  +GFV  
Sbjct: 397  ELTSIVLPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAIFLGFVAK 456

Query: 484  MXXXXXXXXXXXXXASCAVLMLCVLCKTDWMVQVERAKEXXXXXXXXXXXXXXLPVVTLN 305
            +              SCA+LML VLC+TDW +QV+RAKE              LP+    
Sbjct: 457  LGFPGLWIGLLAAQGSCAMLMLVVLCRTDWNLQVQRAKELTKSSTTSDDVDAKLPIF--- 513

Query: 304  SGATTNKKNGQNLDEILCSFDDEFVKSSAALEADPL-ISATTTECV 170
                 NK N     E +    D F K S +LE DPL I++TTT C+
Sbjct: 514  MEGNVNKNNVHGCLEEIVITHDVFTKKS-SLETDPLIITSTTTNCI 558


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