BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020553
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284465.1| PREDICTED: general transcription factor IIH ...    47   5e-06

>ref|XP_002284465.1| PREDICTED: general transcription factor IIH subunit 3 [Vitis
           vinifera] gi|302141830|emb|CBI19033.3| unnamed protein
           product [Vitis vinifera]
          Length = 297

 Score = 47.0 bits (110), Expect(2) = 5e-06
 Identities = 30/56 (53%), Positives = 33/56 (58%), Gaps = 9/56 (16%)
 Frame = -3

Query: 550 YIYDSSLAPPNKRAEI---------LLQKLEEFVIKDEELSAEDLVDGIKSSLLSG 410
           +I+DSS  P N   E          LLQKLEEFV  DE+LS E L  GI SSLLSG
Sbjct: 69  FIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGDEKLSKEVLAAGIGSSLLSG 124



 Score = 28.5 bits (62), Expect(2) = 5e-06
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -1

Query: 315 RVFRSGSLHPQPR 277
           RVFR+G LHPQPR
Sbjct: 135 RVFRTGPLHPQPR 147