BLASTX nr result

ID: Cnidium21_contig00020545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020545
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotei...   148   4e-34
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]      145   4e-33
emb|CBI17535.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...   144   1e-32
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p...   142   4e-32

>ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus] gi|449504870|ref|XP_004162317.1| PREDICTED: U1
           small nuclear ribonucleoprotein 70 kDa-like [Cucumis
           sativus]
          Length = 505

 Score =  148 bits (374), Expect = 4e-34
 Identities = 77/115 (66%), Positives = 83/115 (72%)
 Frame = -1

Query: 347 MGDYNDAFLRNNAAGGAPNVQSRVKAQARTNVLQLKLIGQSHPTGLTNNLLKXXXXXXXX 168
           MGDYNDAF+RN  A     VQ+R KAQ R NVLQLKLIGQSHPTGLT NLLK        
Sbjct: 1   MGDYNDAFMRNQNAA----VQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPL 56

Query: 167 XXXXXXXKNKCPPYTGMAQYVPNFAEPSDAEYAPPVQKGETPTEKRARVHQLRLE 3
                  K KCPP TGMAQ+V NFAEP D EYAPPVQKGETPTE+RAR+H LR+E
Sbjct: 57  EFKPPPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPTERRARIHLLRIE 111


>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/115 (63%), Positives = 83/115 (72%)
 Frame = -1

Query: 347 MGDYNDAFLRNNAAGGAPNVQSRVKAQARTNVLQLKLIGQSHPTGLTNNLLKXXXXXXXX 168
           MGDY+DA +RN  A     VQ+R KAQ R NV+QLKLIGQSHPTGLT NLLK        
Sbjct: 1   MGDYSDALMRNQNAA----VQARTKAQNRANVMQLKLIGQSHPTGLTTNLLKLFEPRPPL 56

Query: 167 XXXXXXXKNKCPPYTGMAQYVPNFAEPSDAEYAPPVQKGETPTEKRARVHQLRLE 3
                  K KCPPYTGMAQ+V NFA+P DAEYAPPVQK ETP E+RAR+H++RLE
Sbjct: 57  EYKPPPEKRKCPPYTGMAQFVSNFAQPGDAEYAPPVQKAETPVERRARIHKIRLE 111


>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/115 (63%), Positives = 82/115 (71%)
 Frame = -1

Query: 347 MGDYNDAFLRNNAAGGAPNVQSRVKAQARTNVLQLKLIGQSHPTGLTNNLLKXXXXXXXX 168
           MGDYNDA +RNN A     VQ+R KAQ R NVLQLKLIGQSHPTGLT NLLK        
Sbjct: 1   MGDYNDALMRNNNAA----VQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPL 56

Query: 167 XXXXXXXKNKCPPYTGMAQYVPNFAEPSDAEYAPPVQKGETPTEKRARVHQLRLE 3
                  K KCPPYTGMAQ+  NFAEP + EY+PPVQK ETP ++RAR+H+LRLE
Sbjct: 57  EFKPPPEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAETPAQRRARIHKLRLE 111


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
           vinifera]
          Length = 514

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/115 (63%), Positives = 82/115 (71%)
 Frame = -1

Query: 347 MGDYNDAFLRNNAAGGAPNVQSRVKAQARTNVLQLKLIGQSHPTGLTNNLLKXXXXXXXX 168
           MGDYNDA +RNN A     VQ+R KAQ R NVLQLKLIGQSHPTGLT NLLK        
Sbjct: 1   MGDYNDALMRNNNAA----VQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPL 56

Query: 167 XXXXXXXKNKCPPYTGMAQYVPNFAEPSDAEYAPPVQKGETPTEKRARVHQLRLE 3
                  K KCPPYTGMAQ+  NFAEP + EY+PPVQK ETP ++RAR+H+LRLE
Sbjct: 57  EFKPPPEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAETPAQRRARIHKLRLE 111


>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
           communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
           ribonucleoprotein 70 kDa, putative [Ricinus communis]
          Length = 506

 Score =  142 bits (357), Expect = 4e-32
 Identities = 73/115 (63%), Positives = 80/115 (69%)
 Frame = -1

Query: 347 MGDYNDAFLRNNAAGGAPNVQSRVKAQARTNVLQLKLIGQSHPTGLTNNLLKXXXXXXXX 168
           MGDYNDAF+RN  A     V+   K Q R NVLQLKLIGQSHPTGLT NLLK        
Sbjct: 1   MGDYNDAFMRNQNAA----VRGATKGQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPL 56

Query: 167 XXXXXXXKNKCPPYTGMAQYVPNFAEPSDAEYAPPVQKGETPTEKRARVHQLRLE 3
                  K KCPPYTGMAQ+V  FAEP D EYAPPVQ+ ETPT++RAR+HQLRLE
Sbjct: 57  EYKPPPEKRKCPPYTGMAQFVTQFAEPGDPEYAPPVQEAETPTQRRARIHQLRLE 111


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