BLASTX nr result

ID: Cnidium21_contig00020525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020525
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135179.1| PREDICTED: probable ran guanine nucleotide r...   144   6e-33
ref|XP_002524187.1| Nuclear import protein mog1, putative [Ricin...   142   4e-32
ref|XP_003518721.1| PREDICTED: ran guanine nucleotide release fa...   137   7e-31
ref|NP_001241181.1| uncharacterized protein LOC100786093 [Glycin...   136   2e-30
ref|XP_003613697.1| Ran guanine nucleotide release factor [Medic...   134   6e-30

>ref|XP_004135179.1| PREDICTED: probable ran guanine nucleotide release factor-like
           [Cucumis sativus] gi|449478418|ref|XP_004155313.1|
           PREDICTED: probable ran guanine nucleotide release
           factor-like [Cucumis sativus]
          Length = 202

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/99 (72%), Positives = 81/99 (81%)
 Frame = -2

Query: 298 AEQLSNRSLFGGAIVCNFPHRFQDVCDVRQVPDHQEAFVDPGRDESLIFELLDFKHDVPD 119
           A+  + R+LFGGAIV  FP RFQDV +VRQVPDHQE FVDP RDESLIFELLDFKHDV D
Sbjct: 3   ADFSTERALFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGD 62

Query: 118 NGSATWFFQDLASEQDAGGTMVIEQSGVFEAEWLRFRNM 2
           NGSA WF QDLA+EQDA G++VIEQSGV EA  L + N+
Sbjct: 63  NGSAVWFLQDLATEQDAEGSVVIEQSGVIEAPELCYGNI 101


>ref|XP_002524187.1| Nuclear import protein mog1, putative [Ricinus communis]
           gi|223536556|gb|EEF38202.1| Nuclear import protein mog1,
           putative [Ricinus communis]
          Length = 203

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/97 (70%), Positives = 78/97 (80%)
 Frame = -2

Query: 295 EQLSNRSLFGGAIVCNFPHRFQDVCDVRQVPDHQEAFVDPGRDESLIFELLDFKHDVPDN 116
           +  + R LFGGAI  +FP RFQDV ++RQVPDHQE FVDP RDESLIFELLDFKHD+ DN
Sbjct: 4   DSYTERPLFGGAITTSFPLRFQDVSNIRQVPDHQEVFVDPARDESLIFELLDFKHDIGDN 63

Query: 115 GSATWFFQDLASEQDAGGTMVIEQSGVFEAEWLRFRN 5
           GSATWF QDLA+EQDA G  +IEQSGV EA  L +R+
Sbjct: 64  GSATWFLQDLANEQDAEGCTLIEQSGVVEAPGLLYRD 100


>ref|XP_003518721.1| PREDICTED: ran guanine nucleotide release factor-like [Glycine max]
          Length = 198

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/91 (71%), Positives = 73/91 (80%)
 Frame = -2

Query: 274 LFGGAIVCNFPHRFQDVCDVRQVPDHQEAFVDPGRDESLIFELLDFKHDVPDNGSATWFF 95
           LFGG I   FPHRFQDV ++RQVPDHQE F DP  DESLIFELL+FK DV DNGSA WF 
Sbjct: 11  LFGGKIASTFPHRFQDVSNIRQVPDHQEVFADPSHDESLIFELLEFKPDVADNGSAAWFL 70

Query: 94  QDLASEQDAGGTMVIEQSGVFEAEWLRFRNM 2
           QDLA+EQDA G++VIEQSGV EA  L ++NM
Sbjct: 71  QDLATEQDAEGSVVIEQSGVLEAPGLMYKNM 101


>ref|NP_001241181.1| uncharacterized protein LOC100786093 [Glycine max]
           gi|255642279|gb|ACU21404.1| unknown [Glycine max]
          Length = 198

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/90 (73%), Positives = 71/90 (78%)
 Frame = -2

Query: 274 LFGGAIVCNFPHRFQDVCDVRQVPDHQEAFVDPGRDESLIFELLDFKHDVPDNGSATWFF 95
           LFGG I   FPHRFQDV  +RQVPDHQE F DP RDESLIFELL+FK DV DNGSA WF 
Sbjct: 11  LFGGKISSTFPHRFQDVSSIRQVPDHQEVFADPSRDESLIFELLEFKPDVADNGSAGWFL 70

Query: 94  QDLASEQDAGGTMVIEQSGVFEAEWLRFRN 5
           QDLASEQDA G++VIEQSGV EA  L + N
Sbjct: 71  QDLASEQDAEGSVVIEQSGVLEAPGLMYNN 100


>ref|XP_003613697.1| Ran guanine nucleotide release factor [Medicago truncatula]
           gi|355515032|gb|AES96655.1| Ran guanine nucleotide
           release factor [Medicago truncatula]
          Length = 402

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/112 (58%), Positives = 79/112 (70%)
 Frame = -2

Query: 337 THTHI*IASCAPMAEQLSNRSLFGGAIVCNFPHRFQDVCDVRQVPDHQEAFVDPGRDESL 158
           +H+H    +     + +  R LFGG I   FP+RFQDV D+RQVPDHQE F DP RDESL
Sbjct: 189 SHSHNHTLAAKMSQDVVYQRPLFGGKISSTFPNRFQDVSDIRQVPDHQEVFADPSRDESL 248

Query: 157 IFELLDFKHDVPDNGSATWFFQDLASEQDAGGTMVIEQSGVFEAEWLRFRNM 2
           I ELL+FK D+ D+GSA WF QDLA EQDA GT+VIEQSGV EA  L + N+
Sbjct: 249 IVELLEFKPDIADDGSAAWFLQDLAREQDAEGTVVIEQSGVLEAPGLMYNNI 300


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