BLASTX nr result

ID: Cnidium21_contig00020491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020491
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517222.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   126   2e-27
ref|XP_003531405.1| PREDICTED: U-box domain-containing protein 2...   122   2e-26
ref|XP_003525112.1| PREDICTED: U-box domain-containing protein 2...   122   2e-26
ref|XP_003630199.1| U-box domain-containing protein [Medicago tr...   122   3e-26
ref|XP_002309886.1| photoperiod-response-like protein [Populus t...   115   4e-24

>ref|XP_002517222.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223543593|gb|EEF45122.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 412

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/76 (77%), Positives = 68/76 (89%)
 Frame = -3

Query: 353 EHGVTILWSLCCLFRESKVQTVVVKSNGLTKLLLLMQSNCSHAVRQMSSDMLKMFRVNSK 174
           EH VTILWSLC LFR+ K +  V+KSNGLTK+LLLMQSNCS AVRQM++D+LK+FRVNSK
Sbjct: 337 EHAVTILWSLCYLFRDGKAREAVIKSNGLTKILLLMQSNCSPAVRQMAADLLKIFRVNSK 396

Query: 173 SCLISYETKTTHIMPF 126
           SCL SY+TKTTHIMPF
Sbjct: 397 SCLSSYDTKTTHIMPF 412


>ref|XP_003531405.1| PREDICTED: U-box domain-containing protein 27-like [Glycine max]
          Length = 418

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = -3

Query: 353 EHGVTILWSLCCLFRESKVQTVVVKSNGLTKLLLLMQSNCSHAVRQMSSDMLKMFRVNSK 174
           EH VT LWS+C LFR+ K Q  V K+NGLTK+LLLMQSNCS  VRQMSSD+LK+FRVNSK
Sbjct: 343 EHAVTTLWSVCYLFRDQKAQEAVTKANGLTKILLLMQSNCSPQVRQMSSDLLKIFRVNSK 402

Query: 173 SCLISYETKTTHIMPF 126
           SCL SY+TKTTHIMPF
Sbjct: 403 SCLSSYDTKTTHIMPF 418


>ref|XP_003525112.1| PREDICTED: U-box domain-containing protein 27-like [Glycine max]
          Length = 418

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = -3

Query: 353 EHGVTILWSLCCLFRESKVQTVVVKSNGLTKLLLLMQSNCSHAVRQMSSDMLKMFRVNSK 174
           EH VT LWS+C LFR+ K Q  V K+NGLTK+LLLMQSNCS  VRQMSSD+LK+FRVNSK
Sbjct: 343 EHAVTTLWSVCYLFRDQKAQEAVTKANGLTKILLLMQSNCSPQVRQMSSDLLKIFRVNSK 402

Query: 173 SCLISYETKTTHIMPF 126
           SCL SY+TKTTHIMPF
Sbjct: 403 SCLSSYDTKTTHIMPF 418


>ref|XP_003630199.1| U-box domain-containing protein [Medicago truncatula]
           gi|357519901|ref|XP_003630239.1| U-box domain-containing
           protein [Medicago truncatula]
           gi|355524221|gb|AET04675.1| U-box domain-containing
           protein [Medicago truncatula]
           gi|355524261|gb|AET04715.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 418

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = -3

Query: 353 EHGVTILWSLCCLFRESKVQTVVVKSNGLTKLLLLMQSNCSHAVRQMSSDMLKMFRVNSK 174
           EH VTILWS+C LFR+ K Q  V K+NGLTK+LLLMQSNCS  VRQMS D+LK+FRVNSK
Sbjct: 343 EHAVTILWSVCYLFRDQKAQEAVTKANGLTKILLLMQSNCSPQVRQMSVDLLKIFRVNSK 402

Query: 173 SCLISYETKTTHIMPF 126
           SCL SY+TKTTHIMPF
Sbjct: 403 SCLSSYDTKTTHIMPF 418


>ref|XP_002309886.1| photoperiod-response-like protein [Populus trichocarpa]
           gi|224093344|ref|XP_002309891.1|
           photoperiod-response-like protein [Populus trichocarpa]
           gi|222852789|gb|EEE90336.1| photoperiod-response-like
           protein [Populus trichocarpa]
           gi|222852794|gb|EEE90341.1| photoperiod-response-like
           protein [Populus trichocarpa]
          Length = 414

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/78 (73%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = -3

Query: 353 EHGVTILWSLCCLFRESKVQTVVVKSNGLTKLLLLMQSNCSHAVRQMSSDMLKMFRVNSK 174
           EH V ILWS+C LFR+   Q  +VKSNGLTK+LLLMQSNCS  VRQMS D+LK+FRVNSK
Sbjct: 337 EHAVMILWSVCYLFRDGDAQDALVKSNGLTKILLLMQSNCSPVVRQMSGDLLKIFRVNSK 396

Query: 173 --SCLISYETKTTHIMPF 126
             SCL SY+TKTTHIMPF
Sbjct: 397 FSSCLSSYDTKTTHIMPF 414


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