BLASTX nr result

ID: Cnidium21_contig00020445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020445
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527856.1| PREDICTED: transcription initiation factor I...   153   2e-35
ref|NP_001241605.1| uncharacterized protein LOC100788473 [Glycin...   153   2e-35
ref|XP_004152667.1| PREDICTED: transcription initiation factor I...   152   2e-35
ref|XP_002279990.2| PREDICTED: transcription initiation factor I...   152   4e-35
ref|XP_002307692.1| predicted protein [Populus trichocarpa] gi|1...   152   4e-35

>ref|XP_003527856.1| PREDICTED: transcription initiation factor IIF subunit beta-like
           [Glycine max]
          Length = 262

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/81 (90%), Positives = 76/81 (93%)
 Frame = -2

Query: 361 KAPDVKRTRRDRSELEDIMFKLFERQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGS 182
           K  D KRTRRDR ELEDIMFKLFERQPNW LKQLVQETDQPAQFLKEILNELCVYNKRG+
Sbjct: 182 KQSDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGA 241

Query: 181 NQGTYELKPEYKKSVEETAAE 119
           NQGTYELKPEYKKSVE+T+AE
Sbjct: 242 NQGTYELKPEYKKSVEDTSAE 262


>ref|NP_001241605.1| uncharacterized protein LOC100788473 [Glycine max]
           gi|255646380|gb|ACU23669.1| unknown [Glycine max]
          Length = 262

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/81 (90%), Positives = 76/81 (93%)
 Frame = -2

Query: 361 KAPDVKRTRRDRSELEDIMFKLFERQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGS 182
           K  D KRTRRDR ELEDIMFKLFERQPNW LKQLVQETDQPAQFLKEILNELCVYNKRG+
Sbjct: 182 KQSDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGA 241

Query: 181 NQGTYELKPEYKKSVEETAAE 119
           NQGTYELKPEYKKSVE+T+AE
Sbjct: 242 NQGTYELKPEYKKSVEDTSAE 262


>ref|XP_004152667.1| PREDICTED: transcription initiation factor IIF subunit beta-like
           [Cucumis sativus] gi|449520699|ref|XP_004167371.1|
           PREDICTED: transcription initiation factor IIF subunit
           beta-like [Cucumis sativus]
          Length = 260

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/81 (90%), Positives = 75/81 (92%)
 Frame = -2

Query: 361 KAPDVKRTRRDRSELEDIMFKLFERQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGS 182
           K  DVKRTRRDR ELEDIMFKLFERQPNW LKQLVQETDQPAQFLKEILNELCVYNKRG+
Sbjct: 180 KQSDVKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGT 239

Query: 181 NQGTYELKPEYKKSVEETAAE 119
           NQGTYELKPEYKKSVE+T  E
Sbjct: 240 NQGTYELKPEYKKSVEDTGGE 260


>ref|XP_002279990.2| PREDICTED: transcription initiation factor IIF subunit beta [Vitis
           vinifera]
          Length = 260

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/81 (88%), Positives = 75/81 (92%)
 Frame = -2

Query: 361 KAPDVKRTRRDRSELEDIMFKLFERQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGS 182
           K  D+KRTRRDR ELEDIMFKLFERQPNW LKQLVQETDQPAQFLKEILNELCVYNKRG+
Sbjct: 180 KGSDMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGT 239

Query: 181 NQGTYELKPEYKKSVEETAAE 119
           NQGTYELKPEYKKS E+T AE
Sbjct: 240 NQGTYELKPEYKKSAEDTGAE 260


>ref|XP_002307692.1| predicted protein [Populus trichocarpa] gi|118481065|gb|ABK92486.1|
           unknown [Populus trichocarpa]
           gi|222857141|gb|EEE94688.1| predicted protein [Populus
           trichocarpa]
          Length = 261

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/81 (88%), Positives = 76/81 (93%)
 Frame = -2

Query: 361 KAPDVKRTRRDRSELEDIMFKLFERQPNWTLKQLVQETDQPAQFLKEILNELCVYNKRGS 182
           K  DVKRTRRDR ELEDIMFKLFERQPNW LKQLVQETDQPAQFLKEILNELCVYNKRG+
Sbjct: 181 KQSDVKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGT 240

Query: 181 NQGTYELKPEYKKSVEETAAE 119
           NQGTYELKPEYKK+VE+T A+
Sbjct: 241 NQGTYELKPEYKKTVEDTGAD 261


Top