BLASTX nr result

ID: Cnidium21_contig00020416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020416
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]              356   4e-96
ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cy...   347   2e-93
ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|2...   345   1e-92
ref|XP_002316790.1| predicted protein [Populus trichocarpa] gi|2...   341   1e-91
gb|ABK22180.1| unknown [Picea sitchensis]                             339   5e-91

>emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]
          Length = 201

 Score =  356 bits (914), Expect = 4e-96
 Identities = 171/200 (85%), Positives = 190/200 (95%)
 Frame = -1

Query: 1004 LNGRAFRAQREDSIRRTVYVSDIDHNVTEEQLAGLFCGYGQVVDCRVCGDPHSHLRFAFV 825
            +N RA++AQREDSIRRTVYV++ID+NVTEEQLA LF  YGQVVDCR+CGDPHS LRFAFV
Sbjct: 1    MNNRAYKAQREDSIRRTVYVAEIDNNVTEEQLAALFSAYGQVVDCRICGDPHSRLRFAFV 60

Query: 824  EFADEFSARAALSLGGTLLGFSPVKVLPSKTAILPVNPTFLPKSEDEREMCARTVYCTNI 645
            EFADE+SARAALSL GT+LGFSP+KVLPSKTAILPVNPTFLP+SEDEREMCARTVYCTNI
Sbjct: 61   EFADEYSARAALSLCGTILGFSPLKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNI 120

Query: 644  DKKISQADVKAFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAIIALDCCGQVMGSQ 465
            DKK++QADVK FFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAI+ALDCCG+++GSQ
Sbjct: 121  DKKVTQADVKNFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAILALDCCGEILGSQ 180

Query: 464  PVRVSPSKTPVRPRVPRPGM 405
             +RVSPSKTPVRPR+PR  M
Sbjct: 181  RIRVSPSKTPVRPRLPRAMM 200


>ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
            [Vitis vinifera] gi|296088694|emb|CBI38144.3| unnamed
            protein product [Vitis vinifera]
          Length = 292

 Score =  347 bits (891), Expect = 2e-93
 Identities = 170/204 (83%), Positives = 187/204 (91%)
 Frame = -1

Query: 1013 KRRLNGRAFRAQREDSIRRTVYVSDIDHNVTEEQLAGLFCGYGQVVDCRVCGDPHSHLRF 834
            +RRL+GRAFRAQREDSIRRTVYVSDID +VTEE+LA LF   GQVVDCRVCGDPHS LRF
Sbjct: 89   RRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCGDPHSVLRF 148

Query: 833  AFVEFADEFSARAALSLGGTLLGFSPVKVLPSKTAILPVNPTFLPKSEDEREMCARTVYC 654
            AFVEFADE  ARAAL+LGGT+LG+ PV+VLPSKTAILPVNPTFLP+SEDEREMCARTVYC
Sbjct: 149  AFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTVYC 208

Query: 653  TNIDKKISQADVKAFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAIIALDCCGQVM 474
            TNIDKK+SQA+VK FFE  CGEVSRLRLLGDHVHSTRIAFVEF MAESAI+AL+C G V+
Sbjct: 209  TNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMAESAIVALNCSGLVL 268

Query: 473  GSQPVRVSPSKTPVRPRVPRPGMH 402
            G+QP+RVSPSKTPVRPRVPR  +H
Sbjct: 269  GTQPIRVSPSKTPVRPRVPRATLH 292


>ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|222846171|gb|EEE83718.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  345 bits (884), Expect = 1e-92
 Identities = 168/204 (82%), Positives = 186/204 (91%)
 Frame = -1

Query: 1013 KRRLNGRAFRAQREDSIRRTVYVSDIDHNVTEEQLAGLFCGYGQVVDCRVCGDPHSHLRF 834
            +R+LNGRA+RAQ+EDSIRRTVYVSDID +VTEE+LAGLF G GQVVDCRVCGDPHS LRF
Sbjct: 104  RRKLNGRAYRAQQEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQVVDCRVCGDPHSVLRF 163

Query: 833  AFVEFADEFSARAALSLGGTLLGFSPVKVLPSKTAILPVNPTFLPKSEDEREMCARTVYC 654
            AFVEFADE  ARAAL+LGGT+LG+ PV+VLPSKTAILPVNPTFLP+SEDEREMC RTVYC
Sbjct: 164  AFVEFADEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTVYC 223

Query: 653  TNIDKKISQADVKAFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAIIALDCCGQVM 474
            TNIDKK+SQ +VK FFE+ CGEV+RLRLLGD VHSTRIAFVEF MAESAI+AL+C G  +
Sbjct: 224  TNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAMAESAIVALNCSGMAL 283

Query: 473  GSQPVRVSPSKTPVRPRVPRPGMH 402
            GSQPVRVSPSKTPVRPRV RP MH
Sbjct: 284  GSQPVRVSPSKTPVRPRVTRPAMH 307


>ref|XP_002316790.1| predicted protein [Populus trichocarpa] gi|222859855|gb|EEE97402.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  341 bits (875), Expect = 1e-91
 Identities = 168/204 (82%), Positives = 186/204 (91%)
 Frame = -1

Query: 1013 KRRLNGRAFRAQREDSIRRTVYVSDIDHNVTEEQLAGLFCGYGQVVDCRVCGDPHSHLRF 834
            +RRLNGRA+RAQREDSIRRTVYVSDID +VTEEQLAGLF G GQVVDCR+CGDP S LRF
Sbjct: 105  RRRLNGRAYRAQREDSIRRTVYVSDIDQHVTEEQLAGLFSGCGQVVDCRICGDPRSVLRF 164

Query: 833  AFVEFADEFSARAALSLGGTLLGFSPVKVLPSKTAILPVNPTFLPKSEDEREMCARTVYC 654
            AFVEFA E  ARAAL+LGGT+LG+ PV+VLPSKTAILPVNPTFLP+SEDEREMC RTVYC
Sbjct: 165  AFVEFAVEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPQSEDEREMCTRTVYC 224

Query: 653  TNIDKKISQADVKAFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAIIALDCCGQVM 474
            TNI+KK+SQA+VK FFE+ CGEV+RLRLLGDHVHSTRIAFVEF MAESAI+AL+C G V+
Sbjct: 225  TNIEKKVSQAEVKNFFESICGEVTRLRLLGDHVHSTRIAFVEFAMAESAIVALNCSGMVL 284

Query: 473  GSQPVRVSPSKTPVRPRVPRPGMH 402
            GSQPVRVSPSKTPVRPRV R  +H
Sbjct: 285  GSQPVRVSPSKTPVRPRVTRLALH 308


>gb|ABK22180.1| unknown [Picea sitchensis]
          Length = 288

 Score =  339 bits (870), Expect = 5e-91
 Identities = 162/204 (79%), Positives = 183/204 (89%)
 Frame = -1

Query: 1013 KRRLNGRAFRAQREDSIRRTVYVSDIDHNVTEEQLAGLFCGYGQVVDCRVCGDPHSHLRF 834
            KRRLNGR  RAQ+EDS+RRTVYV DIDH VTEEQLA LF   GQV+DCR+CGDP+S LRF
Sbjct: 85   KRRLNGRNIRAQQEDSVRRTVYVCDIDHQVTEEQLAALFINCGQVIDCRICGDPNSVLRF 144

Query: 833  AFVEFADEFSARAALSLGGTLLGFSPVKVLPSKTAILPVNPTFLPKSEDEREMCARTVYC 654
            AF+EFADE  ARAALSL GT+LG+ PV+VLPSKTAILPVNPTFLP+SEDEREMCART+YC
Sbjct: 145  AFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTIYC 204

Query: 653  TNIDKKISQADVKAFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAIIALDCCGQVM 474
            TNIDKK+SQ +V+ FFE+ CGEVSRLRLLGDHVHSTRIAFVEFVMAESAI+AL+C G ++
Sbjct: 205  TNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMAESAILALNCSGAIV 264

Query: 473  GSQPVRVSPSKTPVRPRVPRPGMH 402
            GS P+RVSPSKTPVRPR+P P MH
Sbjct: 265  GSLPIRVSPSKTPVRPRIPHPTMH 288


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