BLASTX nr result
ID: Cnidium21_contig00020366
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00020366 (1273 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAE47589.1| photosystem II protein D2 [Lactuca sativa] 508 e-141 ref|YP_004072457.1| PSII D2 protein [Corynocarpus laevigata] gi|... 504 e-140 gb|AAS46043.1| photosystem II protein D2 [Oryza sativa Indica Gr... 503 e-140 ref|YP_003934296.1| photosystem II protein D2 [Monsonia speciosa... 503 e-140 gb|AFB70740.1| photosystem II D2 protein, partial (chloroplast) ... 503 e-140 >dbj|BAE47589.1| photosystem II protein D2 [Lactuca sativa] Length = 359 Score = 508 bits (1309), Expect = e-141 Identities = 244/258 (94%), Positives = 246/258 (95%) Frame = -2 Query: 774 LNRRITMTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTT 595 +NRRITMTIALGK TKDE DLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFA+GGWFTGTT Sbjct: 1 MNRRITMTIALGKVTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTT 60 Query: 594 FVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF 415 FVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF Sbjct: 61 FVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF 120 Query: 414 VALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF 235 VALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF Sbjct: 121 VALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF 180 Query: 234 GVAAIFRFILFFQGFHNWTLNPFHMMXXXXXXXXXXLCAIHGATVENTLFEDGDGANTFR 55 GVAAIFRFILFFQGFHNWTLNPFHMM LCAIHGATVENTLFEDGDGANTFR Sbjct: 181 GVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFR 240 Query: 54 AFNPTQAEETYSMVTANR 1 AFNPTQAEETYSMVTANR Sbjct: 241 AFNPTQAEETYSMVTANR 258 >ref|YP_004072457.1| PSII D2 protein [Corynocarpus laevigata] gi|309252885|gb|ADO60305.1| PSII D2 protein [Corynocarpus laevigata] gi|377581190|gb|AFB70733.1| photosystem II D2 protein, partial (chloroplast) [Anredera baselloides] gi|377581194|gb|AFB70735.1| photosystem II D2 protein, partial (chloroplast) [Didierea madagascariensis] gi|408899270|gb|AFU94469.1| PsbD, partial (chloroplast) [Viola pubescens] Length = 353 Score = 504 bits (1297), Expect = e-140 Identities = 242/252 (96%), Positives = 242/252 (96%) Frame = -2 Query: 756 MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 577 MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY Sbjct: 1 MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60 Query: 576 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 397 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120 Query: 396 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 217 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180 Query: 216 RFILFFQGFHNWTLNPFHMMXXXXXXXXXXLCAIHGATVENTLFEDGDGANTFRAFNPTQ 37 RFILFFQGFHNWTLNPFHMM LCAIHGATVENTLFEDGDGANTFRAFNPTQ Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240 Query: 36 AEETYSMVTANR 1 AEETYSMVTANR Sbjct: 241 AEETYSMVTANR 252 >gb|AAS46043.1| photosystem II protein D2 [Oryza sativa Indica Group] gi|42795542|gb|AAS46108.1| photosystem II protein D2 [Oryza sativa Japonica Group] gi|42795606|gb|AAS46171.1| photosystem II protein D2 [Oryza sativa Japonica Group] gi|290790561|gb|ADD62821.1| photosystem II protein D2 [Oryza sativa Japonica Group] gi|290790630|gb|ADD62889.1| photosystem II protein D2 [Oryza meridionalis] gi|290790699|gb|ADD62957.1| photosystem II protein D2 [Oryza australiensis] gi|290790836|gb|ADD63092.1| photosystem II protein D2 [Microlaena stipoides] Length = 359 Score = 503 bits (1296), Expect = e-140 Identities = 241/258 (93%), Positives = 245/258 (94%) Frame = -2 Query: 774 LNRRITMTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTT 595 +NRRITMTIALG+ TK+E DLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTT Sbjct: 1 MNRRITMTIALGRVTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTT 60 Query: 594 FVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF 415 FVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF Sbjct: 61 FVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTF 120 Query: 414 VALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF 235 VALHGAF LIGFMLRQFELARSVQLRPYNAI+FSGPIAVFVSVFLIYPLGQSGWFFAPSF Sbjct: 121 VALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSGWFFAPSF 180 Query: 234 GVAAIFRFILFFQGFHNWTLNPFHMMXXXXXXXXXXLCAIHGATVENTLFEDGDGANTFR 55 GVAAIFRFILFFQGFHNWTLNPFHMM LCAIHGATVENTLFEDGDGANTFR Sbjct: 181 GVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFR 240 Query: 54 AFNPTQAEETYSMVTANR 1 AFNPTQAEETYSMVTANR Sbjct: 241 AFNPTQAEETYSMVTANR 258 >ref|YP_003934296.1| photosystem II protein D2 [Monsonia speciosa] gi|197132044|gb|ACH47540.1| photosystem II protein D2 [Monsonia speciosa] gi|197132046|gb|ACH47541.1| photosystem II protein D2 [Sarcocaulon vanderietiae] gi|300069311|gb|ADJ66431.1| photosystem II protein D2 [Monsonia speciosa] Length = 353 Score = 503 bits (1295), Expect = e-140 Identities = 241/252 (95%), Positives = 242/252 (96%) Frame = -2 Query: 756 MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 577 MT+ALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY Sbjct: 1 MTLALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60 Query: 576 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 397 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120 Query: 396 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 217 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180 Query: 216 RFILFFQGFHNWTLNPFHMMXXXXXXXXXXLCAIHGATVENTLFEDGDGANTFRAFNPTQ 37 RFILFFQGFHNWTLNPFHMM LCAIHGATVENTLFEDGDGANTFRAFNPTQ Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240 Query: 36 AEETYSMVTANR 1 AEETYSMVTANR Sbjct: 241 AEETYSMVTANR 252 >gb|AFB70740.1| photosystem II D2 protein, partial (chloroplast) [Pereskiopsis diguetii] gi|377581208|gb|AFB70742.1| photosystem II D2 protein, partial (chloroplast) [Weingartia kargliana] Length = 353 Score = 503 bits (1294), Expect = e-140 Identities = 241/252 (95%), Positives = 242/252 (96%) Frame = -2 Query: 756 MTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 577 MTIA+GKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY Sbjct: 1 MTIAVGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY 60 Query: 576 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 397 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA Sbjct: 61 THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA 120 Query: 396 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 217 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF Sbjct: 121 FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF 180 Query: 216 RFILFFQGFHNWTLNPFHMMXXXXXXXXXXLCAIHGATVENTLFEDGDGANTFRAFNPTQ 37 RFILFFQGFHNWTLNPFHMM LCAIHGATVENTLFEDGDGANTFRAFNPTQ Sbjct: 181 RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ 240 Query: 36 AEETYSMVTANR 1 AEETYSMVTANR Sbjct: 241 AEETYSMVTANR 252