BLASTX nr result

ID: Cnidium21_contig00020361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020361
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...    75   5e-12
emb|CBI24843.3| unnamed protein product [Vitis vinifera]               75   5e-12
ref|XP_002299652.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus com...    72   6e-11
ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arab...    69   3e-10

>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 194 MFYSNTFLARKGPLGTGWCAAHLQSRLKKSHITATNIPKTV 72
           MFYS+TFLARKGPLGT WCAAHLQ +LKKSH TAT+IP TV
Sbjct: 1   MFYSHTFLARKGPLGTVWCAAHLQHKLKKSHYTATDIPSTV 41


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 194 MFYSNTFLARKGPLGTGWCAAHLQSRLKKSHITATNIPKTV 72
           MFYS+TFLARKGPLGT WCAAHLQ +LKKSH TAT+IP TV
Sbjct: 1   MFYSHTFLARKGPLGTVWCAAHLQHKLKKSHYTATDIPSTV 41


>ref|XP_002299652.1| predicted protein [Populus trichocarpa] gi|222846910|gb|EEE84457.1|
           predicted protein [Populus trichocarpa]
          Length = 818

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = -3

Query: 194 MFYSNTFLARKGPLGTGWCAAHLQSRLKKSHITATNIPKTV 72
           MFYS TFLARKGPLGT WCAAHLQ RLKKSH T+T+IP TV
Sbjct: 1   MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTDIPSTV 41


>ref|XP_002513194.1| cohesin subunit rad21, putative [Ricinus communis]
           gi|223547692|gb|EEF49185.1| cohesin subunit rad21,
           putative [Ricinus communis]
          Length = 774

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = -3

Query: 194 MFYSNTFLARKGPLGTGWCAAHLQSRLKKSHITATNIPKTV 72
           MFYS TFLARKGPLGT WCAAHLQ RLKKSH T+T+I  TV
Sbjct: 1   MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTDISSTV 41


>ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arabidopsis lyrata subsp.
           lyrata] gi|297322348|gb|EFH52769.1| hypothetical protein
           ARALYDRAFT_486422 [Arabidopsis lyrata subsp. lyrata]
          Length = 696

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/41 (78%), Positives = 34/41 (82%)
 Frame = -3

Query: 194 MFYSNTFLARKGPLGTGWCAAHLQSRLKKSHITATNIPKTV 72
           MFYS+T LARKGPLGT WCAAH+Q RLKKS  TA NIP TV
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVQHRLKKSQYTAVNIPDTV 41


Top