BLASTX nr result

ID: Cnidium21_contig00020348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020348
         (1683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21566.3| unnamed protein product [Vitis vinifera]              552   e-155
ref|XP_002276999.1| PREDICTED: glutamate receptor 3.6-like [Viti...   552   e-155
ref|XP_002306436.1| glutamate-gated kainate-type ion channel rec...   549   e-154
dbj|BAL15058.1| glutamate receptor 3.5 [Solanum lycopersicum]         538   e-150
ref|XP_003533407.1| PREDICTED: glutamate receptor 3.6-like [Glyc...   537   e-150

>emb|CBI21566.3| unnamed protein product [Vitis vinifera]
          Length = 936

 Score =  552 bits (1423), Expect = e-155
 Identities = 273/400 (68%), Positives = 330/400 (82%)
 Frame = -3

Query: 1678 LITSNVYDAAVGDIAITTTRTRMVDFTQPYIESGLVVVAPVKKSNTSTWAFLRPFTRQMW 1499
            LIT+ VYDAA+GDIAI T RTRMVDFTQPYIESGLVVVAP+K SN++ WAFL+PF++ MW
Sbjct: 533  LITTGVYDAAIGDIAIVTNRTRMVDFTQPYIESGLVVVAPIKTSNSNAWAFLKPFSKNMW 592

Query: 1498 FVTGISFLVVGAVVWILEHRINDDFRGPPRQQCVTILWFSFSTMFFSHRENTVSTLGRXX 1319
             VTG  FL+VGAVVWILEHRIND+FRGPPR+Q VTILWFSFST+FF+HRENTVSTLGR  
Sbjct: 593  IVTGTFFLLVGAVVWILEHRINDEFRGPPRRQFVTILWFSFSTLFFAHRENTVSTLGRVV 652

Query: 1318 XXXXXXXXXXINSSYTASLTSILTVEKLSSPIKGIQTLVMSNDPIGYQQGSFSRNYLINQ 1139
                      INSSYTASLTSILTV++LSSP+KGI++L  SNDPIGYQQGSF+ NYL  +
Sbjct: 653  LIIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIESLQTSNDPIGYQQGSFAVNYLSEE 712

Query: 1138 LGINESRLKPLTTPDQYVEALKRGPENGGVAAIVDERAYVELFLASHCEFSIVGQEFTRT 959
            L I++SRL PL + + Y +AL+ GP+ GGVAA+VDERAY+ELFL++ CEF+IVGQEFT++
Sbjct: 713  LNIHKSRLVPLNSAEDYAKALRDGPKKGGVAAVVDERAYIELFLSTRCEFTIVGQEFTKS 772

Query: 958  GWGFAFPRDSPVAVDLSTAILKLSESGDLQRIHDKWLMSSACTSQTTKFEVDKLELKSFS 779
            GWGFAFPRDSP+AVD+STAILKLSE+GDLQRIHDKWL  SAC SQ  K  VD+L+L+SF 
Sbjct: 773  GWGFAFPRDSPLAVDMSTAILKLSETGDLQRIHDKWLKGSACRSQDAKLAVDRLQLRSFW 832

Query: 778  GLFAICGLACVLALIIYFTLIMRKFIRHQPEEPDSAGGSSRSARIQTFLSFVDEKEVDLK 599
            GL+AICGLAC++AL IY  L++R+F +H  EE DS+  +SRS R+QTFLSFVDEKE D+K
Sbjct: 833  GLYAICGLACLVALFIYAILMVRQFSKHYIEESDSSVQNSRSGRLQTFLSFVDEKEEDVK 892

Query: 598  SKSKRRHMEVVSNVDVDEDASVNGSNRSRKFMSTNKSTNT 479
            S+SKRR ME+ S     ED S++ S R    +S+NKST T
Sbjct: 893  SRSKRRQMEMASTRSTYEDESLSSSKRRHIELSSNKSTIT 932


>ref|XP_002276999.1| PREDICTED: glutamate receptor 3.6-like [Vitis vinifera]
          Length = 938

 Score =  552 bits (1423), Expect = e-155
 Identities = 273/400 (68%), Positives = 330/400 (82%)
 Frame = -3

Query: 1678 LITSNVYDAAVGDIAITTTRTRMVDFTQPYIESGLVVVAPVKKSNTSTWAFLRPFTRQMW 1499
            LIT+ VYDAA+GDIAI T RTRMVDFTQPYIESGLVVVAP+K SN++ WAFL+PF++ MW
Sbjct: 535  LITTGVYDAAIGDIAIVTNRTRMVDFTQPYIESGLVVVAPIKTSNSNAWAFLKPFSKNMW 594

Query: 1498 FVTGISFLVVGAVVWILEHRINDDFRGPPRQQCVTILWFSFSTMFFSHRENTVSTLGRXX 1319
             VTG  FL+VGAVVWILEHRIND+FRGPPR+Q VTILWFSFST+FF+HRENTVSTLGR  
Sbjct: 595  IVTGTFFLLVGAVVWILEHRINDEFRGPPRRQFVTILWFSFSTLFFAHRENTVSTLGRVV 654

Query: 1318 XXXXXXXXXXINSSYTASLTSILTVEKLSSPIKGIQTLVMSNDPIGYQQGSFSRNYLINQ 1139
                      INSSYTASLTSILTV++LSSP+KGI++L  SNDPIGYQQGSF+ NYL  +
Sbjct: 655  LIIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIESLQTSNDPIGYQQGSFAVNYLSEE 714

Query: 1138 LGINESRLKPLTTPDQYVEALKRGPENGGVAAIVDERAYVELFLASHCEFSIVGQEFTRT 959
            L I++SRL PL + + Y +AL+ GP+ GGVAA+VDERAY+ELFL++ CEF+IVGQEFT++
Sbjct: 715  LNIHKSRLVPLNSAEDYAKALRDGPKKGGVAAVVDERAYIELFLSTRCEFTIVGQEFTKS 774

Query: 958  GWGFAFPRDSPVAVDLSTAILKLSESGDLQRIHDKWLMSSACTSQTTKFEVDKLELKSFS 779
            GWGFAFPRDSP+AVD+STAILKLSE+GDLQRIHDKWL  SAC SQ  K  VD+L+L+SF 
Sbjct: 775  GWGFAFPRDSPLAVDMSTAILKLSETGDLQRIHDKWLKGSACRSQDAKLAVDRLQLRSFW 834

Query: 778  GLFAICGLACVLALIIYFTLIMRKFIRHQPEEPDSAGGSSRSARIQTFLSFVDEKEVDLK 599
            GL+AICGLAC++AL IY  L++R+F +H  EE DS+  +SRS R+QTFLSFVDEKE D+K
Sbjct: 835  GLYAICGLACLVALFIYAILMVRQFSKHYIEESDSSVQNSRSGRLQTFLSFVDEKEEDVK 894

Query: 598  SKSKRRHMEVVSNVDVDEDASVNGSNRSRKFMSTNKSTNT 479
            S+SKRR ME+ S     ED S++ S R    +S+NKST T
Sbjct: 895  SRSKRRQMEMASTRSTYEDESLSSSKRRHIELSSNKSTIT 934


>ref|XP_002306436.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222855885|gb|EEE93432.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 937

 Score =  549 bits (1415), Expect = e-154
 Identities = 269/406 (66%), Positives = 333/406 (82%)
 Frame = -3

Query: 1678 LITSNVYDAAVGDIAITTTRTRMVDFTQPYIESGLVVVAPVKKSNTSTWAFLRPFTRQMW 1499
            LIT+ VYDAA+GDIAI T RTRM DFTQPYIESGLVVVAPVKK N+S W+FL+PFTRQMW
Sbjct: 536  LITAGVYDAAIGDIAIITNRTRMADFTQPYIESGLVVVAPVKKMNSSAWSFLKPFTRQMW 595

Query: 1498 FVTGISFLVVGAVVWILEHRINDDFRGPPRQQCVTILWFSFSTMFFSHRENTVSTLGRXX 1319
             VT + F++VGAVVWILEHR+NDDFRGPPR+Q +TILWFSFST FF+HRENT+STLGR  
Sbjct: 596  GVTALFFIIVGAVVWILEHRLNDDFRGPPRRQLITILWFSFSTWFFAHRENTISTLGRFV 655

Query: 1318 XXXXXXXXXXINSSYTASLTSILTVEKLSSPIKGIQTLVMSNDPIGYQQGSFSRNYLINQ 1139
                      INSSYTASLTSILTV++L+SPIKGI +L+ S DPIGYQQGSF+R+YLIN+
Sbjct: 656  LIIWLFVVLIINSSYTASLTSILTVQQLTSPIKGIDSLISSKDPIGYQQGSFTRDYLINE 715

Query: 1138 LGINESRLKPLTTPDQYVEALKRGPENGGVAAIVDERAYVELFLASHCEFSIVGQEFTRT 959
            LGI++SRL  L  P+ Y +ALK GP  GGVAA+VDERAY+ELFL++ CEFSIVG+EFT+ 
Sbjct: 716  LGIHKSRLISLKMPEDYAKALKDGPHKGGVAAVVDERAYLELFLSNQCEFSIVGREFTKN 775

Query: 958  GWGFAFPRDSPVAVDLSTAILKLSESGDLQRIHDKWLMSSACTSQTTKFEVDKLELKSFS 779
            GWGFAFPRDSP+AVDLSTAILKLSE+GDLQRIHDKWLM SAC+SQ  KFEVD+L+L+SF 
Sbjct: 776  GWGFAFPRDSPLAVDLSTAILKLSENGDLQRIHDKWLMRSACSSQGAKFEVDRLDLRSFW 835

Query: 778  GLFAICGLACVLALIIYFTLIMRKFIRHQPEEPDSAGGSSRSARIQTFLSFVDEKEVDLK 599
            GL+ ICG+AC+LAL +YF  ++R+F RH   E DS+G  S SAR+QTFLSFVDEKE ++K
Sbjct: 836  GLYLICGIACLLALFLYFLKMVRQFSRHYSSELDSSGRGSTSARLQTFLSFVDEKEQEVK 895

Query: 598  SKSKRRHMEVVSNVDVDEDASVNGSNRSRKFMSTNKSTNTESASES 461
            S+SKRR +E+ SN     + S++  +  R+ + +    + ++++E+
Sbjct: 896  SRSKRRQLEMASN----RNESMDNYSSKRRHIESPPDGSPQASNEA 937


>dbj|BAL15058.1| glutamate receptor 3.5 [Solanum lycopersicum]
          Length = 958

 Score =  538 bits (1386), Expect = e-150
 Identities = 264/396 (66%), Positives = 322/396 (81%)
 Frame = -3

Query: 1678 LITSNVYDAAVGDIAITTTRTRMVDFTQPYIESGLVVVAPVKKSNTSTWAFLRPFTRQMW 1499
            LIT+ VYDAA+GDIAITT RT+MVDFTQPYIESGLVVVAPVK+ N++ WAFL PFT +MW
Sbjct: 556  LITAGVYDAAIGDIAITTNRTKMVDFTQPYIESGLVVVAPVKEQNSNAWAFLSPFTPKMW 615

Query: 1498 FVTGISFLVVGAVVWILEHRINDDFRGPPRQQCVTILWFSFSTMFFSHRENTVSTLGRXX 1319
             VTG+ FL+VG V+WILEHR+ND+FRGPP +Q VT+LWFSFST+F + RENTVST GR  
Sbjct: 616  CVTGVFFLIVGTVIWILEHRLNDEFRGPPSKQIVTVLWFSFSTLFTAQRENTVSTFGRIV 675

Query: 1318 XXXXXXXXXXINSSYTASLTSILTVEKLSSPIKGIQTLVMSNDPIGYQQGSFSRNYLINQ 1139
                      INSSYTASLTSILTV+KLSSPI GI++LV + +PIGYQ GSF+RNYLI +
Sbjct: 676  LLIWLFVVLIINSSYTASLTSILTVQKLSSPITGIESLVNTKEPIGYQWGSFARNYLIQE 735

Query: 1138 LGINESRLKPLTTPDQYVEALKRGPENGGVAAIVDERAYVELFLASHCEFSIVGQEFTRT 959
            L I+ESRL PL  P+ Y +ALK GP  GGVAA+VDERAY+ELFL+S C+FSI+GQEFT+ 
Sbjct: 736  LRIDESRLVPLNLPEDYAKALKDGPSRGGVAAVVDERAYMELFLSSRCQFSILGQEFTKN 795

Query: 958  GWGFAFPRDSPVAVDLSTAILKLSESGDLQRIHDKWLMSSACTSQTTKFEVDKLELKSFS 779
            GWGFAFPRDSP+AVD+STAILKLSE+G+LQRIHDKWL   ACTSQ+TK EVD+L+LKSFS
Sbjct: 796  GWGFAFPRDSPLAVDMSTAILKLSENGELQRIHDKWLSGIACTSQSTKLEVDRLQLKSFS 855

Query: 778  GLFAICGLACVLALIIYFTLIMRKFIRHQPEEPDSAGGSSRSARIQTFLSFVDEKEVDLK 599
            GLF +CGLAC LAL+IYF ++  ++ ++ P   + A  SSRS R+QTFLSF DEKE  ++
Sbjct: 856  GLFFLCGLACFLALLIYFVMLACQYCQYYPNS-EVASESSRSGRLQTFLSFADEKEESVR 914

Query: 598  SKSKRRHMEVVSNVDVDEDASVNGSNRSRKFMSTNK 491
            S+SKRR +EV S   +D+DASVNGS   R  + +N+
Sbjct: 915  SRSKRRQLEVTSVRSIDQDASVNGSRTDRSEIYSNR 950


>ref|XP_003533407.1| PREDICTED: glutamate receptor 3.6-like [Glycine max]
          Length = 938

 Score =  537 bits (1384), Expect = e-150
 Identities = 266/396 (67%), Positives = 324/396 (81%)
 Frame = -3

Query: 1678 LITSNVYDAAVGDIAITTTRTRMVDFTQPYIESGLVVVAPVKKSNTSTWAFLRPFTRQMW 1499
            LIT+ V+DAAVGDI ITT RT+MVDFTQPYIESGLVVVA VKK++++ WAFL PFT  MW
Sbjct: 536  LITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPMMW 595

Query: 1498 FVTGISFLVVGAVVWILEHRINDDFRGPPRQQCVTILWFSFSTMFFSHRENTVSTLGRXX 1319
             VT + FL+VGAVVWILEHR+NDDFRGPP+QQ VTILWFSFSTMFF+HRENTVSTLGR  
Sbjct: 596  TVTAVFFLLVGAVVWILEHRLNDDFRGPPKQQMVTILWFSFSTMFFAHRENTVSTLGRFV 655

Query: 1318 XXXXXXXXXXINSSYTASLTSILTVEKLSSPIKGIQTLVMSNDPIGYQQGSFSRNYLINQ 1139
                      INSSYTASLTSILTV++LSSP+KGI++L+ S +PIGY QGSF+R YLI++
Sbjct: 656  LLIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIESLISSKEPIGYLQGSFTRTYLIDE 715

Query: 1138 LGINESRLKPLTTPDQYVEALKRGPENGGVAAIVDERAYVELFLASHCEFSIVGQEFTRT 959
            +GI+ESRL PL TP++  EALK+GP+ GGVAA VDERAY+ELFL+S C++SIVGQEFTR 
Sbjct: 716  IGIDESRLVPLKTPEETTEALKKGPQKGGVAAYVDERAYIELFLSSRCDYSIVGQEFTRN 775

Query: 958  GWGFAFPRDSPVAVDLSTAILKLSESGDLQRIHDKWLMSSACTSQTTKFEVDKLELKSFS 779
            GWGFAFPRDSP+AVDLSTAIL+L+E+GDLQRIHDKWL+SSAC SQ  K EVD+L L+SF 
Sbjct: 776  GWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLSSACLSQGAKLEVDRLNLRSFW 835

Query: 778  GLFAICGLACVLALIIYFTLIMRKFIRHQPEEPDSAGGSSRSARIQTFLSFVDEKEVDLK 599
            GL+ +CGLACVLAL+IYF   MR++ +H PEE +S+G  S S+R++TFL+FVDEKE  +K
Sbjct: 836  GLYLVCGLACVLALLIYFIQTMRQYSKHGPEELESSGHGSGSSRLRTFLTFVDEKEEIVK 895

Query: 598  SKSKRRHMEVVSNVDVDEDASVNGSNRSRKFMSTNK 491
            S+SKR+ ME +S     E  S    N++    S N+
Sbjct: 896  SRSKRKKMEGISYRSTSEVGSSITFNKAYSQASLNR 931


Top