BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020345
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
emb|CBI19924.3| unnamed protein product [Vitis vinifera]              137   9e-31
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_002876981.1| pentatricopeptide repeat-containing protein ...   136   2e-30
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,...   130   9e-29

>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
           gi|449521874|ref|XP_004167954.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
          Length = 697

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/106 (57%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
 Frame = -3

Query: 317 ALNTGKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVACRDLILWNCMLL 138
           AL  GK++HGFMVRN Y  D+V TGALVDMY KCR ++YA KVF+ VA RD++LWN ++L
Sbjct: 509 ALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCRELKYALKVFEHVASRDVVLWNSIIL 568

Query: 137 GCCHNSKVDLVFELFELMN-DEGVKPDNTTFQAVFIACISGSRVEL 3
           GCCHN +  L  +LF+LM  +EG+KPD+ TFQ + +AC+  + VEL
Sbjct: 569 GCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGILLACLHENLVEL 614



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/97 (28%), Positives = 50/97 (51%)
 Frame = -3

Query: 317 ALNTGKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVACRDLILWNCMLL 138
           AL+  +++HG +V+ G++ +V+   +LVD+Y KCR +  A  +F  +  R+ + WN ++ 
Sbjct: 175 ALHFSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVR 234

Query: 137 GCCHNSKVDLVFELFELMNDEGVKPDNTTFQAVFIAC 27
                        +F  M  E + P + TF    IAC
Sbjct: 235 RYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIAC 271



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
 Frame = -3

Query: 305 GKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKV--FQRVACRDLILWNCMLLGC 132
           GK+VHGF+ R G+  ++    AL+DMY KC  ++ A KV  +Q    RD + WN +L   
Sbjct: 412 GKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLKSA-KVWFYQMSQWRDKVSWNALLTAH 470

Query: 131 CHNSKVDLVFELFELMNDEGVKPDNTTFQAVFIAC 27
             +   +    +F  M  E   P+N TF  +  AC
Sbjct: 471 ARHGMSEQAMTIFSEMQLE-TDPNNFTFATLLGAC 504


>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/98 (64%), Positives = 74/98 (75%)
 Frame = -3

Query: 317 ALNTGKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVACRDLILWNCMLL 138
           AL  GK++HGFM+RNGY  DVVA GALVDMYSKCR +EYA KVF+    RDLILWN M+L
Sbjct: 510 ALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMIL 569

Query: 137 GCCHNSKVDLVFELFELMNDEGVKPDNTTFQAVFIACI 24
           GCCHN +   V  LF LM +EGVKPD+ TFQ + + CI
Sbjct: 570 GCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCI 607



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/104 (29%), Positives = 53/104 (50%)
 Frame = -3

Query: 317 ALNTGKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVACRDLILWNCMLL 138
           AL   K++HG +V+ G+ ++V+   +LVD+Y KCR +  A ++F  +   + I WN ++ 
Sbjct: 176 ALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVR 235

Query: 137 GCCHNSKVDLVFELFELMNDEGVKPDNTTFQAVFIACISGSRVE 6
                        +F  M    ++P N TF    IAC S S ++
Sbjct: 236 RYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQ 279



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/83 (32%), Positives = 47/83 (56%)
 Frame = -3

Query: 317 ALNTGKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVACRDLILWNCMLL 138
           AL  G ++HG  +R GY  D V + +L+DMY+KC  +E A ++F+  + ++LI W  ++ 
Sbjct: 277 ALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVS 336

Query: 137 GCCHNSKVDLVFELFELMNDEGV 69
           G   + +      LF+ M +  V
Sbjct: 337 GYAMSGQTREARVLFDEMPERSV 359


>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Vitis vinifera]
          Length = 711

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/98 (64%), Positives = 74/98 (75%)
 Frame = -3

Query: 317 ALNTGKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVACRDLILWNCMLL 138
           AL  GK++HGFM+RNGY  DVVA GALVDMYSKCR +EYA KVF+    RDLILWN M+L
Sbjct: 510 ALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMIL 569

Query: 137 GCCHNSKVDLVFELFELMNDEGVKPDNTTFQAVFIACI 24
           GCCHN +   V  LF LM +EGVKPD+ TFQ + + CI
Sbjct: 570 GCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCI 607



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/104 (29%), Positives = 53/104 (50%)
 Frame = -3

Query: 317 ALNTGKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVACRDLILWNCMLL 138
           AL   K++HG +V+ G+ ++V+   +LVD+Y KCR +  A ++F  +   + I WN ++ 
Sbjct: 176 ALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVR 235

Query: 137 GCCHNSKVDLVFELFELMNDEGVKPDNTTFQAVFIACISGSRVE 6
                        +F  M    ++P N TF    IAC S S ++
Sbjct: 236 RYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQ 279



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/83 (32%), Positives = 47/83 (56%)
 Frame = -3

Query: 317 ALNTGKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVACRDLILWNCMLL 138
           AL  G ++HG  +R GY  D V + +L+DMY+KC  +E A ++F+  + ++LI W  ++ 
Sbjct: 277 ALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVS 336

Query: 137 GCCHNSKVDLVFELFELMNDEGV 69
           G   + +      LF+ M +  V
Sbjct: 337 GYAMSGQTREARVLFDEMPERSV 359


>ref|XP_002876981.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322819|gb|EFH53240.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 693

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/105 (60%), Positives = 76/105 (72%)
 Frame = -3

Query: 317 ALNTGKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVACRDLILWNCMLL 138
           ALN GK +HGF++RNGY  DVV  GA+VDMYSKCR  +YA +VF+  A RDLILWN ++ 
Sbjct: 511 ALNLGKAIHGFLIRNGYNIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIR 570

Query: 137 GCCHNSKVDLVFELFELMNDEGVKPDNTTFQAVFIACISGSRVEL 3
           GCC N +   VFELF L+ DEGVKPD+ TF A+  ACI    VEL
Sbjct: 571 GCCRNGRSKEVFELFMLLEDEGVKPDHVTFSAILQACIREGHVEL 615



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = -3

Query: 305 GKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVA-CRDLILWNCMLLGCC 129
           GK+ HGF+ R+GY  +V+   AL+DMY KC  ++ A   F++++  RD + WN +L G  
Sbjct: 414 GKQAHGFIYRHGYDMNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473

Query: 128 HNSKVDLVFELFELMNDEGVKPDNTTFQAVFIAC 27
              + +     FE M  E  KP   T   +   C
Sbjct: 474 RVGRSEQALSFFEGMQME-AKPSKYTLATLLAGC 506


>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 718

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/105 (57%), Positives = 74/105 (70%)
 Frame = -3

Query: 317 ALNTGKEVHGFMVRNGYIFDVVATGALVDMYSKCRRVEYAFKVFQRVACRDLILWNCMLL 138
           AL+ GKE+HGFM+RNGY  D V +GALVDMYSKCR + YA  VF R   RD+ILWN ++L
Sbjct: 507 ALDQGKEIHGFMIRNGYNLDTVISGALVDMYSKCRCLSYALTVFNRAGSRDVILWNSIIL 566

Query: 137 GCCHNSKVDLVFELFELMNDEGVKPDNTTFQAVFIACISGSRVEL 3
           GCCHN +   V +LF  M  EGVKPD+ TF  V +AC+    V+L
Sbjct: 567 GCCHNGRGKEVLKLFGQMEKEGVKPDHVTFHGVLLACMYEGHVKL 611