BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020313
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283487.1| PREDICTED: transmembrane emp24 domain-contai...   166   2e-39
ref|XP_002517064.1| coated vesicle membrane protein, putative [R...   158   6e-37
ref|XP_002315749.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_002883380.1| hypothetical protein ARALYDRAFT_479795 [Arab...   154   1e-35
ref|NP_188924.3| emp24/gp25L/p24 family/GOLD domain-containing p...   152   2e-35

>ref|XP_002283487.1| PREDICTED: transmembrane emp24 domain-containing protein A [Vitis
           vinifera] gi|297737114|emb|CBI26315.3| unnamed protein
           product [Vitis vinifera]
          Length = 215

 Score =  166 bits (421), Expect = 2e-39
 Identities = 88/143 (61%), Positives = 95/143 (66%), Gaps = 4/143 (2%)
 Frame = -1

Query: 418 MEERK--RCVLGFLL--LFFTLIRDLSALSITVNDVECVSEYVLYEGDTVSGNFVVVDHD 251
           ME R   RC  GF+   LFF+ I  +SALS+TVN+VECV EYV+YEGDTVSGNFVVVDHD
Sbjct: 1   MERRHTHRCATGFIFIALFFSFIHRISALSVTVNEVECVYEYVIYEGDTVSGNFVVVDHD 60

Query: 250 IFWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHPGIDLIVTSPGGNTVHTLKGTS 71
           IFWG                               SDHPGID  VTSP GNTVHTLKGTS
Sbjct: 61  IFWG-------------------------------SDHPGIDFTVTSPAGNTVHTLKGTS 89

Query: 70  GDKFEFKAPRSGMYKFCFHNSYS 2
           GDKFEFKAPRSGMYKFCF NSY+
Sbjct: 90  GDKFEFKAPRSGMYKFCFQNSYA 112


>ref|XP_002517064.1| coated vesicle membrane protein, putative [Ricinus communis]
           gi|223543699|gb|EEF45227.1| coated vesicle membrane
           protein, putative [Ricinus communis]
          Length = 210

 Score =  158 bits (399), Expect = 6e-37
 Identities = 85/139 (61%), Positives = 91/139 (65%)
 Frame = -1

Query: 418 MEERKRCVLGFLLLFFTLIRDLSALSITVNDVECVSEYVLYEGDTVSGNFVVVDHDIFWG 239
           M  R+  V+G LLL   LI  +S+LS+TVNDVECV EYVLYEGDTVSGNFVVVDHDIFW 
Sbjct: 1   MTRRQIYVVGILLLM-NLIGRISSLSVTVNDVECVYEYVLYEGDTVSGNFVVVDHDIFWS 59

Query: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHPGIDLIVTSPGGNTVHTLKGTSGDKF 59
                                          SDHPGIDL VTSP  N VHT+KGTSGDKF
Sbjct: 60  -------------------------------SDHPGIDLTVTSPADNVVHTVKGTSGDKF 88

Query: 58  EFKAPRSGMYKFCFHNSYS 2
           EFKAPRSGMYKFCFHN YS
Sbjct: 89  EFKAPRSGMYKFCFHNPYS 107


>ref|XP_002315749.1| predicted protein [Populus trichocarpa] gi|222864789|gb|EEF01920.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  157 bits (397), Expect = 1e-36
 Identities = 80/139 (57%), Positives = 89/139 (64%)
 Frame = -1

Query: 418 MEERKRCVLGFLLLFFTLIRDLSALSITVNDVECVSEYVLYEGDTVSGNFVVVDHDIFWG 239
           ME R++ +     L  + I  + +LS+TVNDVECV EYVLYEGDTVSGNFVVVDHDIFWG
Sbjct: 1   MERRRKQIYVVAALLMSFISRIYSLSVTVNDVECVYEYVLYEGDTVSGNFVVVDHDIFWG 60

Query: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHPGIDLIVTSPGGNTVHTLKGTSGDKF 59
                                          SDHPGID   TSPG NTVHT+KGTSGDKF
Sbjct: 61  -------------------------------SDHPGIDFTATSPGDNTVHTVKGTSGDKF 89

Query: 58  EFKAPRSGMYKFCFHNSYS 2
           EFKAPRSGMYKFCFHN Y+
Sbjct: 90  EFKAPRSGMYKFCFHNPYA 108


>ref|XP_002883380.1| hypothetical protein ARALYDRAFT_479795 [Arabidopsis lyrata subsp.
           lyrata] gi|297329220|gb|EFH59639.1| hypothetical protein
           ARALYDRAFT_479795 [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  154 bits (388), Expect = 1e-35
 Identities = 82/142 (57%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
 Frame = -1

Query: 418 MEERKRCVLGFLLLFFTL---IRDLSALSITVNDVECVSEYVLYEGDTVSGNFVVVDHDI 248
           ME R+  +  F+L+   L   I  +S+LS+TVND ECV EYVLYEGDTVSGNFVVVDHDI
Sbjct: 1   MERRQAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDI 60

Query: 247 FWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHPGIDLIVTSPGGNTVHTLKGTSG 68
           FWG                               SDHPG+D  VTSP GN V TLKGTSG
Sbjct: 61  FWG-------------------------------SDHPGLDFTVTSPAGNIVQTLKGTSG 89

Query: 67  DKFEFKAPRSGMYKFCFHNSYS 2
           DKFEFKAPRSGMYKFCFHN YS
Sbjct: 90  DKFEFKAPRSGMYKFCFHNPYS 111


>ref|NP_188924.3| emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis
           thaliana] gi|75273406|sp|Q9LIL4.1|P24B3_ARATH RecName:
           Full=Transmembrane emp24 domain-containing protein
           p24beta3; AltName: Full=p24 family protein beta2;
           Short=p24beta2; AltName: Full=p24 family protein beta3;
           Short=p24beta3; Flags: Precursor
           gi|11994713|dbj|BAB03029.1| coated vesicle membrane
           protein-like [Arabidopsis thaliana]
           gi|17979492|gb|AAL50082.1| AT3g22845/MWI23_22
           [Arabidopsis thaliana] gi|20147305|gb|AAM10366.1|
           AT3g22845/MWI23_22 [Arabidopsis thaliana]
           gi|332643162|gb|AEE76683.1| emp24/gp25L/p24 family/GOLD
           domain-containing protein [Arabidopsis thaliana]
          Length = 214

 Score =  152 bits (385), Expect = 2e-35
 Identities = 81/142 (57%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
 Frame = -1

Query: 418 MEERKRCVLGFLLLFFTL---IRDLSALSITVNDVECVSEYVLYEGDTVSGNFVVVDHDI 248
           ME R+  +  F+L+   L   I  +S+LS+TVND ECV EYVLYEGDTVSGNFVVVDHDI
Sbjct: 1   MERRQAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDI 60

Query: 247 FWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDHPGIDLIVTSPGGNTVHTLKGTSG 68
           FWG                               SDHPG+D  VTSP GN V TLKGTSG
Sbjct: 61  FWG-------------------------------SDHPGLDFTVTSPAGNIVQTLKGTSG 89

Query: 67  DKFEFKAPRSGMYKFCFHNSYS 2
           DKFEFKAP+SGMYKFCFHN YS
Sbjct: 90  DKFEFKAPKSGMYKFCFHNPYS 111