BLASTX nr result

ID: Cnidium21_contig00020299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020299
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]   305   1e-80
ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510...   290   3e-76
gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK3484...   286   4e-75
ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 ...   284   2e-74
ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|2...   283   3e-74

>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
          Length = 232

 Score =  305 bits (781), Expect = 1e-80
 Identities = 141/212 (66%), Positives = 152/212 (71%), Gaps = 1/212 (0%)
 Frame = +1

Query: 31  MSRGFGEA-AXXXXXXXXXMNNAGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 207
           M+ GFGE+ +          NN  N DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW
Sbjct: 1   MTSGFGESTSRPPQSPSFSSNNGSNSDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 60

Query: 208 LHIHSHSQECPVCKALVEEHKLVPLYGRGKNSTDPRSKSIPGVEIPQRPAGQRPETAPPP 387
           LHIHSHSQECPVCKALVEE KLVPLYGRGK STDPRSKSIPG+ IP RP GQRPETAPPP
Sbjct: 61  LHIHSHSQECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPP 120

Query: 388 DTNHXXXXXXXXXXXXXXXXXXXTARFGNFAVSAGFGGLIPSLFNFNVHGFPGTNIYGGA 567
           D NH                   TARFGNF +SA FGGL PSLFN  VHGFP   +YG A
Sbjct: 121 DANHFMQHGFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVHGFPDATMYGPA 180

Query: 568 PSFPYAYSSPFHGGHTHGFPPRRVSPEEQADF 663
             FPY +S+ FHGGH HGFP    +  +QAD+
Sbjct: 181 AGFPYGFSNSFHGGHAHGFPQHPPTQGQQADY 212


>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
           putative [Ricinus communis]
          Length = 229

 Score =  290 bits (742), Expect = 3e-76
 Identities = 135/197 (68%), Positives = 145/197 (73%)
 Frame = +1

Query: 34  SRGFGEAAXXXXXXXXXMNNAGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLH 213
           S GFGE++          +N  NGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLH
Sbjct: 3   SSGFGESSRPPQSPQFS-SNYSNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLH 61

Query: 214 IHSHSQECPVCKALVEEHKLVPLYGRGKNSTDPRSKSIPGVEIPQRPAGQRPETAPPPDT 393
            HS S+ECPVCKALVEE KLVPLYGRGK STDPRSKSIPGV IP RPAGQRPETAPPP+ 
Sbjct: 62  FHSQSKECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEP 121

Query: 394 NHXXXXXXXXXXXXXXXXXXXTARFGNFAVSAGFGGLIPSLFNFNVHGFPGTNIYGGAPS 573
           NH                   TARFGNF +SA FGGLIPSLFN  VHGFP   +YG A  
Sbjct: 122 NHFAQHGFGFMGGLGGFAPMATARFGNFTLSAAFGGLIPSLFNLQVHGFPDAAMYGTATG 181

Query: 574 FPYAYSSPFHGGHTHGF 624
           FPY +S+ FHGGH HG+
Sbjct: 182 FPYGFSNSFHGGHAHGY 198


>gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK34841.1| unknown
           [Lotus japonicus]
          Length = 228

 Score =  286 bits (733), Expect = 4e-75
 Identities = 131/199 (65%), Positives = 144/199 (72%)
 Frame = +1

Query: 31  MSRGFGEAAXXXXXXXXXMNNAGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL 210
           M+ GFGE+            N  N DAGNFECNICFDLAQDPI+TLCGHLFCWPCLYKWL
Sbjct: 1   MASGFGESTSRSPPSPSYAGN-NNSDAGNFECNICFDLAQDPIITLCGHLFCWPCLYKWL 59

Query: 211 HIHSHSQECPVCKALVEEHKLVPLYGRGKNSTDPRSKSIPGVEIPQRPAGQRPETAPPPD 390
           H HS S+ECPVCKALVEE KLVPLYGRGK S+DPRS+SIPGV IP RPAGQRPETAPPP+
Sbjct: 60  HFHSQSRECPVCKALVEEEKLVPLYGRGKTSSDPRSRSIPGVNIPHRPAGQRPETAPPPE 119

Query: 391 TNHXXXXXXXXXXXXXXXXXXXTARFGNFAVSAGFGGLIPSLFNFNVHGFPGTNIYGGAP 570
            N                    TARFGNF +SA FGG IPSLFNF +HGF G  +YGGAP
Sbjct: 120 PNPFAHHGFGFTGGLGGFAPAATARFGNFTLSAAFGGFIPSLFNFQLHGFHGATMYGGAP 179

Query: 571 SFPYAYSSPFHGGHTHGFP 627
            FPY +S+ FHGGH H +P
Sbjct: 180 GFPYGFSNSFHGGHVHRYP 198


>ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 isoform 1 [Glycine max]
           gi|356519064|ref|XP_003528194.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1 isoform 2 [Glycine max]
          Length = 231

 Score =  284 bits (726), Expect = 2e-74
 Identities = 131/203 (64%), Positives = 145/203 (71%), Gaps = 2/203 (0%)
 Frame = +1

Query: 31  MSRGFGEAAXXXXXXXXXMNNAGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL 210
           M+ GFGE+           NN  N DA NFECNICF+LAQDPI+TLCGHLFCWPCLYKWL
Sbjct: 1   MASGFGESTGRSPPSPSYFNNNNNSDAANFECNICFELAQDPIITLCGHLFCWPCLYKWL 60

Query: 211 HIHSHSQECPVCKALVEEHKLVPLYGRGKNSTDPRSKSIPGVEIPQRPAGQRPETAPPPD 390
           H HS S+ECPVCKALVEE KLVPLYGRGK+STDPRSKSIPGV IP RPAGQRPETAPPP+
Sbjct: 61  HFHSQSRECPVCKALVEEEKLVPLYGRGKSSTDPRSKSIPGVNIPHRPAGQRPETAPPPE 120

Query: 391 TN--HXXXXXXXXXXXXXXXXXXXTARFGNFAVSAGFGGLIPSLFNFNVHGFPGTNIYGG 564
           TN  H                   T RFGNFA+SA FGG IPSLFNF +HGF    +YGG
Sbjct: 121 TNHFHQHGFGFMGGLGGFVPPPMATTRFGNFALSAAFGGFIPSLFNFQMHGFHDAAMYGG 180

Query: 565 APSFPYAYSSPFHGGHTHGFPPR 633
              FP+ +++ FHG H HGFP R
Sbjct: 181 GAGFPHGFANTFHGVHAHGFPLR 203


>ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|222844196|gb|EEE81743.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  283 bits (725), Expect = 3e-74
 Identities = 134/198 (67%), Positives = 144/198 (72%)
 Frame = +1

Query: 31  MSRGFGEAAXXXXXXXXXMNNAGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL 210
           M+ GFGE+           +N GNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL
Sbjct: 1   MASGFGESTSRAPHNSSFTSNNGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL 60

Query: 211 HIHSHSQECPVCKALVEEHKLVPLYGRGKNSTDPRSKSIPGVEIPQRPAGQRPETAPPPD 390
           H HS S+ECPVCKALVEE KLVPLYGRGK STDPRSKSIPGV IP RPAGQRPETAPPP+
Sbjct: 61  HFHSKSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPE 120

Query: 391 TNHXXXXXXXXXXXXXXXXXXXTARFGNFAVSAGFGGLIPSLFNFNVHGFPGTNIYGGAP 570
            NH                   TAR GNF  SA FGGLIPSLFN  VHGFP   +YG A 
Sbjct: 121 PNHFGQHGFGFMGGLGGFAPMATARLGNFTFSAAFGGLIPSLFNLQVHGFPDAAMYGPA- 179

Query: 571 SFPYAYSSPFHGGHTHGF 624
            +PY ++S FHGGH HG+
Sbjct: 180 GYPYGFNS-FHGGHPHGY 196


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