BLASTX nr result

ID: Cnidium21_contig00020296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00020296
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311102.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_004150272.1| PREDICTED: agamous-like MADS-box protein AGL...    59   4e-07
emb|CBI25117.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002271290.1| PREDICTED: agamous-like MADS-box protein AGL...    57   2e-06
ref|XP_002864686.1| MADS-box protein [Arabidopsis lyrata subsp. ...    56   4e-06

>ref|XP_002311102.1| predicted protein [Populus trichocarpa] gi|222850922|gb|EEE88469.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/71 (42%), Positives = 45/71 (63%)
 Frame = +3

Query: 69  IEELNGQLTELQSQFEAQKAYGEDLANVKKPYKALHCWEAPVEELRLEQLQSFKSRLIEL 248
           + E N QL ++ +Q EA+K  GE L  ++K  ++  CWEAP+EEL L +L+  +  L EL
Sbjct: 102 VHEQNMQLAQILNQLEAEKKNGEVLDQMRKVNRSQCCWEAPIEELELHELEQLRGALEEL 161

Query: 249 KTSVANQNGNL 281
           K +VA Q  N+
Sbjct: 162 KKTVAKQVNNI 172


>ref|XP_004150272.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Cucumis
           sativus] gi|449484412|ref|XP_004156875.1| PREDICTED:
           agamous-like MADS-box protein AGL62-like [Cucumis
           sativus]
          Length = 228

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/67 (40%), Positives = 43/67 (64%)
 Frame = +3

Query: 69  IEELNGQLTELQSQFEAQKAYGEDLANVKKPYKALHCWEAPVEELRLEQLQSFKSRLIEL 248
           + ELN QLT++ +Q E ++  GE+L  ++K  +A   WE P+EE+ + QL+  K+ L EL
Sbjct: 96  VRELNAQLTQVLNQLEMERKRGEELNKLRKASQAQCWWELPIEEMEMHQLEQLKASLDEL 155

Query: 249 KTSVANQ 269
           K +V  Q
Sbjct: 156 KKNVTQQ 162


>emb|CBI25117.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +3

Query: 21  LPMSSQIVMLEPMEPI-IEELNGQLTELQSQFEAQKAYGEDLANVKKPYKALHCWEAPVE 197
           LP S  + + E      + +LN QLT++ +Q E +K  GE L  +KK  +A + W AP+E
Sbjct: 82  LPHSGALQLFEAHRSANVRDLNMQLTQVLNQLEGEKKRGEALTQMKKASQAQYWWAAPIE 141

Query: 198 ELRLEQLQSFKSRLIELKTSV 260
           EL  EQL+  K  L  LK +V
Sbjct: 142 ELSFEQLELLKVSLENLKRNV 162


>ref|XP_002271290.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Vitis
           vinifera]
          Length = 212

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +3

Query: 21  LPMSSQIVMLEPMEPI-IEELNGQLTELQSQFEAQKAYGEDLANVKKPYKALHCWEAPVE 197
           LP S  + + E      + +LN QLT++ +Q E +K  GE L  +KK  +A + W AP+E
Sbjct: 82  LPHSGALQLFEAHRSANVRDLNMQLTQVLNQLEGEKKRGEALTQMKKASQAQYWWAAPIE 141

Query: 198 ELRLEQLQSFKSRLIELKTSV 260
           EL  EQL+  K  L  LK +V
Sbjct: 142 ELSFEQLELLKVSLENLKRNV 162


>ref|XP_002864686.1| MADS-box protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310521|gb|EFH40945.1| MADS-box protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = +3

Query: 12  NFNLPMSSQIVMLEPMEP----IIEELNGQLTELQSQFEAQKAYGEDLANVKKPYKAL-H 176
           N N P+S Q   ++  E     I++ELN  LT++ SQ E++K   ++L  +++  +AL +
Sbjct: 76  NNNPPLSHQHNNMQLSETRRNSIVQELNNHLTQVLSQLESEKKKYDELKKIREKTRALGN 135

Query: 177 CWEAPVEELRLEQLQSFKSRLIELKTSV 260
            WE PVEEL L QL  FK  L  LK  V
Sbjct: 136 WWEDPVEELTLPQLDGFKGNLENLKKVV 163


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